RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 NMRAL1Q9HBL8 299 aa4.07□□□□□ -1.76
CKS1B-204ENST00000471245 MED11Q9P086 117 aa4.07□□□□□ -1.76
CKS1B-204ENST00000471245 ZNF225Q9UK10 706 aa4.07□□□□□ -1.76
CKS1B-204ENST00000471245 SNX12Q9UMY4 172 aa4.07□□□□□ -1.76
CKS1B-204ENST00000471245 ARHGAP32A7KAX9 2087 aa4.07□□□□□ -1.76
CKS1B-204ENST00000471245 E7EQL1 145 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 ACOX3O15254 700 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 REM1O75628 298 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 SEMA3DO95025 777 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 STAMBPO95630 424 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 IGHV3-48P01763 117 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 UBTFL6P0CB48 400 aaPredicted RBP4.06□□□□□ -1.76
CKS1B-204ENST00000471245 IL32P24001 234 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 AGTR1P30556 359 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 DDOSTP39656 456 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 BIDP55957 195 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 STK11Q15831 433 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 NSUN5P1Q3KNT7 163 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 HIKESHIQ53FT3 197 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 OR2G6Q5TZ20 316 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 COMMD6Q7Z4G1 85 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 MUC15Q8N387 334 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 OR52H1Q8NGJ2 320 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 STAG3L4Q8TBR4 150 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 ACMSDQ8TDX5 336 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 GPX8Q8TED1 209 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 COL21A1Q96P44 957 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 DHRS9Q9BPW9 319 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 C20orf24Q9BUV8 137 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 POTEKPQ9BYX7 375 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 SELENOIQ9C0D9 397 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 METTL17Q9H7H0 456 aaPredicted RBP4.06□□□□□ -1.76
CKS1B-204ENST00000471245 SNX24Q9Y343 169 aa4.06□□□□□ -1.76
CKS1B-204ENST00000471245 WNK1Q9H4A3 2382 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 A0A0J9YW62 118 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 GOLGA8QA0A0J9YX86 632 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 LINC00854A0A1B0GVQ3 168 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 GOLGA8RI6L899 631 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 HSD17B6O14756 317 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 PHOX2AO14813 284 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 PDYNP01213 254 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 IGKV1D-16P01601 117 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 C2P06681 752 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 CSNK2A2P19784 350 aaPredicted RBP4.05□□□□□ -1.76
CKS1B-204ENST00000471245 MSR1P21757 451 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 EVI2BP34910 448 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 FABP6P51161 128 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 DR1Q01658 176 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 PAX5Q02548 391 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 STX5Q13190 355 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 OXA1LQ15070 435 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 SAMD4BQ5PRF9 694 aaKnown RBP4.05□□□□□ -1.76
CKS1B-204ENST00000471245 C3orf62Q6ZUJ4 267 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 HSD17B13Q7Z5P4 300 aaPredicted RBP4.05□□□□□ -1.76
CKS1B-204ENST00000471245 NUDCD3Q8IVD9 361 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 CCDC71LQ8N9Z2 235 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 SPERTQ8NA61 448 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 BBS1Q8NFJ9 593 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 OR4K17Q8NGC6 315 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 OR9A2Q8NGT5 310 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 OR10D3Q8NH80 312 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 RHEBL1Q8TAI7 183 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 ZNF675Q8TD23 568 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 CHCHD10Q8WYQ3 142 aaPredicted RBP4.05□□□□□ -1.76
CKS1B-204ENST00000471245 SGK3Q96BR1 496 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 MBOAT4Q96T53 435 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 CNN2Q99439 309 aaKnown RBP4.05□□□□□ -1.76
CKS1B-204ENST00000471245 SERPINI1Q99574 410 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 MRPL37Q9BZE1 423 aaKnown RBP4.05□□□□□ -1.76
CKS1B-204ENST00000471245 BPESC1Q9GZL8 116 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 RACGAP1Q9H0H5 632 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 SLC7A10Q9NS82 523 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 PCTPQ9UKL6 214 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 CFL2Q9Y281 166 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 ACOT9Q9Y305 439 aa4.05□□□□□ -1.76
CKS1B-204ENST00000471245 IGLV3-32A0A0A0MS00 114 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 IGKV3D-20A0A0C4DH25 116 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 SMCO3A2RU48 225 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 LOC110117498-PIK3R3F6TDL0 507 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 DLGAP1O14490 977 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 SRSF10O75494 262 aaKnown RBP4.04□□□□□ -1.76
CKS1B-204ENST00000471245 LYZL6O75951 148 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 PSMG1O95456 288 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 OXSR1O95747 527 aaPredicted RBP4.04□□□□□ -1.76
CKS1B-204ENST00000471245 ERCC1P07992 297 aaPredicted RBP4.04□□□□□ -1.76
CKS1B-204ENST00000471245 IL3P08700 152 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 RBMY1CP0DJD4 496 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 GFAPP14136 432 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 SRMP19623 302 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 CRABP2P29373 138 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 LIPEQ05469 1076 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 GNMTQ14749 295 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 DGUOKQ16854 277 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 PLCXD3Q63HM9 321 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 SLC25A48Q6ZT89 311 aaKnown RBP4.04□□□□□ -1.76
CKS1B-204ENST00000471245 BHLHA15Q7RTS1 189 aaPredicted RBP4.04□□□□□ -1.76
CKS1B-204ENST00000471245 GALNT10Q86SR1 603 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 MARCH3Q86UD3 253 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 VRK2Q86Y07 508 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 CTAGE3PQ8IX95 158 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms