RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 PRRX1P54821 245 aa10.08□□□□□ -0.8
TRAPPC12-216ENST00000469400 CDK5Q00535 292 aa10.08□□□□□ -0.8
TRAPPC12-216ENST00000469400 RBM39Q14498 530 aaKnown RBP10.08□□□□□ -0.8
TRAPPC12-216ENST00000469400 KPNB1Q14974 876 aaKnown RBP10.08□□□□□ -0.8
TRAPPC12-216ENST00000469400 ZNF146Q15072 292 aa10.08□□□□□ -0.8
TRAPPC12-216ENST00000469400 UTF1Q5T230 341 aa10.08□□□□□ -0.8
TRAPPC12-216ENST00000469400 PLEKHG7Q6ZR37 379 aa10.08□□□□□ -0.8
TRAPPC12-216ENST00000469400 SBSPONQ8IVN8 264 aa10.08□□□□□ -0.8
TRAPPC12-216ENST00000469400 OR8U1Q8NH10 309 aa10.08□□□□□ -0.8
TRAPPC12-216ENST00000469400 GIPC3Q8TF64 312 aa10.08□□□□□ -0.8
TRAPPC12-216ENST00000469400 CORO2AQ92828 525 aa10.08□□□□□ -0.8
TRAPPC12-216ENST00000469400 MAGIXQ9H6Y5 334 aa10.08□□□□□ -0.8
TRAPPC12-216ENST00000469400 MOB1AQ9H8S9 216 aa10.08□□□□□ -0.8
TRAPPC12-216ENST00000469400 PALMDQ9NP74 551 aa10.08□□□□□ -0.8
TRAPPC12-216ENST00000469400 RBFOX1Q9NWB1 397 aaKnown RBP10.08□□□□□ -0.8
TRAPPC12-216ENST00000469400 TAS2R3Q9NYW6 316 aa10.08□□□□□ -0.8
TRAPPC12-216ENST00000469400 ACTR3BQ9P1U1 418 aa10.08□□□□□ -0.8
TRAPPC12-216ENST00000469400 GLS2Q9UI32 602 aa10.08□□□□□ -0.8
TRAPPC12-216ENST00000469400 TMEM14AQ9Y6G1 99 aa10.08□□□□□ -0.8
TRAPPC12-216ENST00000469400 R4GMQ9 66 aa10.08□□□□□ -0.8
TRAPPC12-216ENST00000469400 KIAA2026Q5HYC2 2103 aa10.07□□□□□ -0.8
TRAPPC12-216ENST00000469400 A0A087X0M5 115 aa10.07□□□□□ -0.8
TRAPPC12-216ENST00000469400 A0A1B0GX30 115 aa10.07□□□□□ -0.8
TRAPPC12-216ENST00000469400 CCDC182A6NF36 153 aa10.07□□□□□ -0.8
TRAPPC12-216ENST00000469400 RPLP1P05386 114 aaKnown RBP10.07□□□□□ -0.8
TRAPPC12-216ENST00000469400 CALCBP10092 127 aa10.07□□□□□ -0.8
TRAPPC12-216ENST00000469400 GLIPR1P48060 266 aa10.07□□□□□ -0.8
TRAPPC12-216ENST00000469400 NPBWR2P48146 333 aa10.07□□□□□ -0.8
TRAPPC12-216ENST00000469400 FUT6P51993 359 aa10.07□□□□□ -0.8
TRAPPC12-216ENST00000469400 KIR2DS1Q14954 304 aa10.07□□□□□ -0.8
TRAPPC12-216ENST00000469400 SPATS1Q496A3 300 aa10.07□□□□□ -0.8
TRAPPC12-216ENST00000469400 TEX38Q6PEX7 206 aa10.07□□□□□ -0.8
TRAPPC12-216ENST00000469400 ZNF322Q6U7Q0 402 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC12-216ENST00000469400 LCNL1Q6ZST4 164 aa10.07□□□□□ -0.8
TRAPPC12-216ENST00000469400 SLC35E3Q7Z769 313 aa10.07□□□□□ -0.8
TRAPPC12-216ENST00000469400 Q8IYB0 196 aa10.07□□□□□ -0.8
TRAPPC12-216ENST00000469400 STPG2Q8N412 459 aa10.07□□□□□ -0.8
TRAPPC12-216ENST00000469400 OR56B4Q8NH76 319 aa10.07□□□□□ -0.8
TRAPPC12-216ENST00000469400 RPEQ96AT9 228 aa10.07□□□□□ -0.8
TRAPPC12-216ENST00000469400 APOL4Q9BPW4 351 aa10.07□□□□□ -0.8
TRAPPC12-216ENST00000469400 ZNF256Q9Y2P7 627 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC12-216ENST00000469400 SNX5Q9Y5X3 404 aa10.07□□□□□ -0.8
TRAPPC12-216ENST00000469400 SMAD5-AS1Q9Y6J3 95 aa10.07□□□□□ -0.8
TRAPPC12-216ENST00000469400 TRBV2A0A0J9YWF9 115 aa10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 LINC01548A6NM66 108 aa10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 H3BSH0 61 aa10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 SIRPB1O00241 398 aa10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 FGF16O43320 207 aa10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 ENTPD6O75354 484 aa10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 IGHG2P01859 326 aa10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 TMEM11P17152 192 aa10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 BCL3P20749 454 aa10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 CCL1P22362 96 aa10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 SNU13P55769 128 aaKnown RBP10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 CDC42P60953 191 aa10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 AESQ08117 197 aa10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 HES1Q14469 280 aa10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 HNF4GQ14541 408 aa10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 ZNF260Q3ZCT1 412 aa10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 FOXRED2Q8IWF2 684 aa10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 DEFB107AQ8IZN7 70 aa10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 FAM58AQ8N1B3 248 aa10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 DRAM1Q8N682 238 aa10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 OR4D6Q8NGJ1 314 aa10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 TOMM40LQ969M1 308 aa10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 ELAC2Q9BQ52 826 aaKnown RBP10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 PLEKHA1Q9HB21 404 aa10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 PCDHB16Q9NRJ7 776 aa10.06□□□□□ -0.8
TRAPPC12-216ENST00000469400 LYSTQ99698 3801 aa10.05□□□□□ -0.8
TRAPPC12-216ENST00000469400 FUOMA2VDF0 154 aa10.05□□□□□ -0.8
TRAPPC12-216ENST00000469400 OSMP13725 252 aa10.05□□□□□ -0.8
TRAPPC12-216ENST00000469400 PRKACAP17612 351 aa10.05□□□□□ -0.8
TRAPPC12-216ENST00000469400 PTGFRP43088 359 aa10.05□□□□□ -0.8
TRAPPC12-216ENST00000469400 CDX1P47902 265 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC12-216ENST00000469400 CXCR4P61073 352 aa10.05□□□□□ -0.8
TRAPPC12-216ENST00000469400 ACTR3P61158 418 aa10.05□□□□□ -0.8
TRAPPC12-216ENST00000469400 GK3PQ14409 553 aa10.05□□□□□ -0.8
TRAPPC12-216ENST00000469400 PNLIPRP3Q17RR3 467 aa10.05□□□□□ -0.8
TRAPPC12-216ENST00000469400 ODF4Q2M2E3 257 aa10.05□□□□□ -0.8
TRAPPC12-216ENST00000469400 FAM98BQ52LJ0 330 aaKnown RBP10.05□□□□□ -0.8
TRAPPC12-216ENST00000469400 SPIN3Q5JUX0 258 aa10.05□□□□□ -0.8
TRAPPC12-216ENST00000469400 TMEM236Q5W0B7 351 aa10.05□□□□□ -0.8
TRAPPC12-216ENST00000469400 ZFAND6Q6FIF0 208 aa10.05□□□□□ -0.8
TRAPPC12-216ENST00000469400 OR9G1Q8NH87 305 aa10.05□□□□□ -0.8
TRAPPC12-216ENST00000469400 BORCS8Q96FH0 119 aa10.05□□□□□ -0.8
TRAPPC12-216ENST00000469400 CNN2Q99439 309 aaKnown RBP10.05□□□□□ -0.8
TRAPPC12-216ENST00000469400 CHST5Q9GZS9 411 aa10.05□□□□□ -0.8
TRAPPC12-216ENST00000469400 ARGLU1Q9NWB6 273 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC12-216ENST00000469400 MRM2Q9UI43 246 aaKnown RBP10.05□□□□□ -0.8
TRAPPC12-216ENST00000469400 A0A1W2PPI3 338 aa10.04□□□□□ -0.8
TRAPPC12-216ENST00000469400 ODAMA1E959 279 aa10.04□□□□□ -0.8
TRAPPC12-216ENST00000469400 SH2D1BO14796 132 aa10.04□□□□□ -0.8
TRAPPC12-216ENST00000469400 SYT7O43581 403 aa10.04□□□□□ -0.8
TRAPPC12-216ENST00000469400 GATBO75879 557 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-216ENST00000469400 LY86O95711 162 aa10.04□□□□□ -0.8
TRAPPC12-216ENST00000469400 OR2H2O95918 312 aa10.04□□□□□ -0.8
TRAPPC12-216ENST00000469400 NFYBP25208 207 aa10.04□□□□□ -0.8
TRAPPC12-216ENST00000469400 POU3F4P49335 361 aa10.04□□□□□ -0.8
TRAPPC12-216ENST00000469400 DIAPH2-AS1Q14236 149 aa10.04□□□□□ -0.8
TRAPPC12-216ENST00000469400 C17orf58Q2M2W7 97 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms