RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 PARP12Q9H0J9 701 aaKnown RBP12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 ZDHHC8Q9ULC8 765 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 BOKQ9UMX3 212 aaPredicted RBP12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 IGKV1-12A0A0C4DH73 117 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 IGKV1D-12P01611 117 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 HOXB1P14653 301 aaPredicted RBP12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 PPT1P50897 306 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 CARD18P57730 90 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 B2MP61769 119 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 CNN3Q15417 329 aaKnown RBP12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 ABCA11PQ4W5N1 156 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 DCAF10Q5QP82 559 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 TSPO2Q5TGU0 170 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 SPINK14Q6IE38 97 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 GPR137CQ8N3F9 429 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 OR10AD1Q8NGE0 317 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 HPSE2Q8WWQ2 592 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 DYRK2Q92630 601 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 HIST1H2BAQ96A08 127 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 DOCK10Q96BY6 2186 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 C14orf79Q96F83 325 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 SF3B5Q9BWJ5 86 aaKnown RBP12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 SLC2A9Q9NRM0 540 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 ZNF318Q5VUA4 2279 aa12.73□□□□□ -0.37
PRPF38B-204ENST00000467302 BORCS7-ASMTA0A0B4J1R7 106 aa12.73□□□□□ -0.37
PRPF38B-204ENST00000467302 GEMIN2O14893 280 aaKnown RBP12.73□□□□□ -0.37
PRPF38B-204ENST00000467302 DIRAS3O95661 229 aa12.73□□□□□ -0.37
PRPF38B-204ENST00000467302 CST2P09228 141 aa12.73□□□□□ -0.37
PRPF38B-204ENST00000467302 PTAFRP25105 342 aa12.73□□□□□ -0.37
PRPF38B-204ENST00000467302 GDF1P27539 372 aa12.73□□□□□ -0.37
PRPF38B-204ENST00000467302 RBP2P50120 134 aa12.73□□□□□ -0.37
PRPF38B-204ENST00000467302 RAB5BP61020 215 aa12.73□□□□□ -0.37
PRPF38B-204ENST00000467302 PIGYQ3MUY2 71 aa12.73□□□□□ -0.37
PRPF38B-204ENST00000467302 WIPI1Q5MNZ9 446 aaPredicted RBP12.73□□□□□ -0.37
PRPF38B-204ENST00000467302 ZNF774Q6NX45 483 aa12.73□□□□□ -0.37
PRPF38B-204ENST00000467302 LHFPL2Q6ZUX7 228 aa12.73□□□□□ -0.37
PRPF38B-204ENST00000467302 OR1F12Q8NHA8 337 aa12.73□□□□□ -0.37
PRPF38B-204ENST00000467302 SLC39A7Q92504 469 aa12.73□□□□□ -0.37
PRPF38B-204ENST00000467302 USB1Q9BQ65 265 aaKnown RBP12.73□□□□□ -0.37
PRPF38B-204ENST00000467302 IFT22Q9H7X7 185 aa12.73□□□□□ -0.37
PRPF38B-204ENST00000467302 PARD6AQ9NPB6 346 aa12.73□□□□□ -0.37
PRPF38B-204ENST00000467302 CNTRLQ7Z7A1 2325 aa12.73□□□□□ -0.37
PRPF38B-204ENST00000467302 KNTC1P50748 2209 aa12.73□□□□□ -0.37
PRPF38B-204ENST00000467302 PINLYPA6NC86 204 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 OR6C6A6NF89 314 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 NME2P1O60361 137 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 NTF4P34130 210 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 UCP3P55916 312 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 FXYD4P59646 89 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 S100A12P80511 92 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 IL13RA2Q14627 380 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 GUK1Q16774 197 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 RNF212Q495C1 297 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 PHLDA2Q53GA4 152 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 BRICD5Q6PL45 260 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 GGNQ86UU5 652 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 OR52M1Q8NGK5 317 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 MOB3AQ96BX8 217 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 TUBA4BQ9H853 241 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 IL36GQ9NZH8 169 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 LUZP4Q9P127 313 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 NCKAP5O14513 1909 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 XRCC2O43543 280 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 EIF3GO75821 320 aaKnown RBP eCLIP12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 ITGA3P26006 1051 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 DUSP1P28562 367 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 AKR1C3P42330 323 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 FHITP49789 147 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 PRSS12P56730 875 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 FOXO1Q12778 655 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 SLC22A25Q6T423 547 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 Q6ZPA2 131 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 BORCS8Q96FH0 119 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 FAM173AQ9BQD7 235 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 BCO1Q9HAY6 547 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 RPS10P5Q9NQ39 176 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 IL17BQ9UHF5 180 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 AHCTF1Q8WYP5 2266 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 SHANK1Q9Y566 2161 aa12.72□□□□□ -0.37
PRPF38B-204ENST00000467302 NRASP01111 189 aa12.71□□□□□ -0.37
PRPF38B-204ENST00000467302 ZNF44P15621 663 aa12.71□□□□□ -0.37
PRPF38B-204ENST00000467302 CD82P27701 267 aa12.71□□□□□ -0.37
PRPF38B-204ENST00000467302 RAB5CP51148 216 aa12.71□□□□□ -0.37
PRPF38B-204ENST00000467302 AWAT1Q58HT5 328 aa12.71□□□□□ -0.37
PRPF38B-204ENST00000467302 ZNF100Q8IYN0 542 aa12.71□□□□□ -0.37
PRPF38B-204ENST00000467302 LGI3Q8N145 548 aa12.71□□□□□ -0.37
PRPF38B-204ENST00000467302 FBXL14Q8N1E6 418 aa12.71□□□□□ -0.37
PRPF38B-204ENST00000467302 OSR2Q8N2R0 312 aa12.71□□□□□ -0.37
PRPF38B-204ENST00000467302 IL22RA1Q8N6P7 574 aa12.71□□□□□ -0.37
PRPF38B-204ENST00000467302 OR5L1Q8NGL2 311 aa12.71□□□□□ -0.37
PRPF38B-204ENST00000467302 OR2V1Q8NHB1 315 aa12.71□□□□□ -0.37
PRPF38B-204ENST00000467302 FER1L6-AS2Q96M78 137 aa12.71□□□□□ -0.37
PRPF38B-204ENST00000467302 RSRP1Q9BUV0 290 aa12.71□□□□□ -0.37
PRPF38B-204ENST00000467302 CRLF2Q9HC73 371 aa12.71□□□□□ -0.37
PRPF38B-204ENST00000467302 C19orf12Q9NSK7 152 aa12.71□□□□□ -0.37
PRPF38B-204ENST00000467302 TMEM38BQ9NVV0 291 aa12.71□□□□□ -0.37
PRPF38B-204ENST00000467302 CACNA1HO95180 2353 aa12.71□□□□□ -0.37
PRPF38B-204ENST00000467302 C7orf77A4D0Y5 90 aa12.71□□□□□ -0.38
PRPF38B-204ENST00000467302 FAM221AA4D161 298 aa12.71□□□□□ -0.38
PRPF38B-204ENST00000467302 C5orf52A6NGY3 159 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms