RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 ZNF146Q15072 292 aa16.43■□□□□ 0.22
COL6A1-203ENST00000466285 C11orf87Q6NUJ2 197 aa16.43■□□□□ 0.22
COL6A1-203ENST00000466285 COQ2Q96H96 371 aa16.43■□□□□ 0.22
COL6A1-203ENST00000466285 GABARAPL3Q9BY60 117 aa16.43■□□□□ 0.22
COL6A1-203ENST00000466285 ING3Q9NXR8 418 aa16.43■□□□□ 0.22
COL6A1-203ENST00000466285 GSTK1Q9Y2Q3 226 aa16.43■□□□□ 0.22
COL6A1-203ENST00000466285 MGST3O14880 152 aa16.42■□□□□ 0.22
COL6A1-203ENST00000466285 IGLV1-47P01700 117 aa16.42■□□□□ 0.22
COL6A1-203ENST00000466285 ATF1P18846 271 aa16.42■□□□□ 0.22
COL6A1-203ENST00000466285 CDK2P24941 298 aa16.42■□□□□ 0.22
COL6A1-203ENST00000466285 HTR1DP28221 377 aa16.42■□□□□ 0.22
COL6A1-203ENST00000466285 RBP2P50120 134 aa16.42■□□□□ 0.22
COL6A1-203ENST00000466285 AESQ08117 197 aa16.42■□□□□ 0.22
COL6A1-203ENST00000466285 ABCA11PQ4W5N1 156 aa16.42■□□□□ 0.22
COL6A1-203ENST00000466285 OR2G2Q8NGZ5 317 aa16.42■□□□□ 0.22
COL6A1-203ENST00000466285 MYDGFQ969H8 173 aa16.42■□□□□ 0.22
COL6A1-203ENST00000466285 FGGYQ96C11 551 aa16.42■□□□□ 0.22
COL6A1-203ENST00000466285 SLC25A33Q9BSK2 321 aa16.42■□□□□ 0.22
COL6A1-203ENST00000466285 PPIL3Q9H2H8 161 aaKnown RBP16.42■□□□□ 0.22
COL6A1-203ENST00000466285 HMG20AQ9NP66 347 aa16.42■□□□□ 0.22
COL6A1-203ENST00000466285 FRRS1LQ9P0K9 344 aa16.42■□□□□ 0.22
COL6A1-203ENST00000466285 AASSQ9UDR5 926 aa16.42■□□□□ 0.22
COL6A1-203ENST00000466285 ZNF281Q9Y2X9 895 aa16.42■□□□□ 0.22
COL6A1-203ENST00000466285 SULT1C4O75897 302 aa16.41■□□□□ 0.22
COL6A1-203ENST00000466285 UBCP0CG48 685 aaKnown RBP16.41■□□□□ 0.22
COL6A1-203ENST00000466285 CD33P20138 364 aa16.41■□□□□ 0.22
COL6A1-203ENST00000466285 MTCP1P56278 107 aa16.41■□□□□ 0.22
COL6A1-203ENST00000466285 GABPB1Q06547 395 aaPredicted RBP16.41■□□□□ 0.22
COL6A1-203ENST00000466285 ABHD12Q8N2K0 398 aa16.41■□□□□ 0.22
COL6A1-203ENST00000466285 WFDC9Q8NEX5 89 aa16.41■□□□□ 0.22
COL6A1-203ENST00000466285 SEBOXQ9HB31 216 aaPredicted RBP16.41■□□□□ 0.22
COL6A1-203ENST00000466285 OAZ3Q9UMX2 235 aa16.41■□□□□ 0.22
COL6A1-203ENST00000466285 WI2-2373I1.2A0A1W2PRP0 233 aa16.4■□□□□ 0.22
COL6A1-203ENST00000466285 SAC3D1A6NKF1 404 aa16.4■□□□□ 0.22
COL6A1-203ENST00000466285 ATP1B3P54709 279 aa16.4■□□□□ 0.22
COL6A1-203ENST00000466285 PDZK1IP1Q13113 114 aa16.4■□□□□ 0.22
COL6A1-203ENST00000466285 Q6P435 159 aa16.4■□□□□ 0.22
COL6A1-203ENST00000466285 ZDHHC13Q8IUH4 622 aa16.4■□□□□ 0.22
COL6A1-203ENST00000466285 DNAAF1Q8NEP3 725 aa16.4■□□□□ 0.22
COL6A1-203ENST00000466285 OR13C9Q8NGT0 318 aa16.4■□□□□ 0.22
COL6A1-203ENST00000466285 PP6455Q8WZ26 134 aa16.4■□□□□ 0.22
COL6A1-203ENST00000466285 MBOAT4Q96T53 435 aa16.4■□□□□ 0.22
COL6A1-203ENST00000466285 ADI1Q9BV57 179 aa16.4■□□□□ 0.22
COL6A1-203ENST00000466285 UBE2J1Q9Y385 318 aaPredicted RBP16.4■□□□□ 0.22
COL6A1-203ENST00000466285 J3QRE1 110 aa16.39■□□□□ 0.21
COL6A1-203ENST00000466285 PF4V1P10720 104 aa16.39■□□□□ 0.21
COL6A1-203ENST00000466285 FASP25445 335 aa16.39■□□□□ 0.21
COL6A1-203ENST00000466285 ERP29P30040 261 aaKnown RBP16.39■□□□□ 0.21
COL6A1-203ENST00000466285 BDH1Q02338 343 aa16.39■□□□□ 0.21
COL6A1-203ENST00000466285 ATXN7L3Q14CW9 347 aaPredicted RBP16.39■□□□□ 0.21
COL6A1-203ENST00000466285 C17orf58Q2M2W7 97 aa16.39■□□□□ 0.21
COL6A1-203ENST00000466285 SPIN3Q5JUX0 258 aa16.39■□□□□ 0.21
COL6A1-203ENST00000466285 HEPN1Q6WQI6 88 aa16.39■□□□□ 0.21
COL6A1-203ENST00000466285 ETV3LQ6ZN32 361 aa16.39■□□□□ 0.21
COL6A1-203ENST00000466285 C18orf65Q6ZTR6 163 aa16.39■□□□□ 0.21
COL6A1-203ENST00000466285 Q8IYB0 196 aa16.39■□□□□ 0.21
COL6A1-203ENST00000466285 OPALINQ96PE5 141 aa16.39■□□□□ 0.21
COL6A1-203ENST00000466285 LIN7BQ9HAP6 207 aa16.39■□□□□ 0.21
COL6A1-203ENST00000466285 EXOSC4Q9NPD3 245 aaKnown RBP16.39■□□□□ 0.21
COL6A1-203ENST00000466285 INPP5EQ9NRR6 644 aa16.39■□□□□ 0.21
COL6A1-203ENST00000466285 DPM3Q9P2X0 92 aa16.39■□□□□ 0.21
COL6A1-203ENST00000466285 HHLA2Q9UM44 414 aa16.39■□□□□ 0.21
COL6A1-203ENST00000466285 TCRBV4S1A1TA0A5B7 111 aa16.38■□□□□ 0.21
COL6A1-203ENST00000466285 ODAMA1E959 279 aa16.38■□□□□ 0.21
COL6A1-203ENST00000466285 LY6LH3BQJ8 138 aa16.38■□□□□ 0.21
COL6A1-203ENST00000466285 KDM4BO94953 1096 aa16.38■□□□□ 0.21
COL6A1-203ENST00000466285 IGHV3-7P01780 117 aa16.38■□□□□ 0.21
COL6A1-203ENST00000466285 HOXD3P31249 432 aaPredicted RBP16.38■□□□□ 0.21
COL6A1-203ENST00000466285 HLA-DRB5Q30154 266 aa16.38■□□□□ 0.21
COL6A1-203ENST00000466285 TPTE2P1Q5T6R2 138 aa16.38■□□□□ 0.21
COL6A1-203ENST00000466285 LHFPL2Q6ZUX7 228 aa16.38■□□□□ 0.21
COL6A1-203ENST00000466285 UTS2BQ765I0 119 aa16.38■□□□□ 0.21
COL6A1-203ENST00000466285 FAM220AQ7Z4H9 259 aa16.38■□□□□ 0.21
COL6A1-203ENST00000466285 ENTHD1Q8IYW4 607 aa16.38■□□□□ 0.21
COL6A1-203ENST00000466285 DTX3Q8N9I9 347 aa16.38■□□□□ 0.21
COL6A1-203ENST00000466285 OR8J1Q8NGP2 316 aa16.38■□□□□ 0.21
COL6A1-203ENST00000466285 COMMD4Q9H0A8 199 aa16.38■□□□□ 0.21
COL6A1-203ENST00000466285 ZNF581Q9P0T4 197 aa16.38■□□□□ 0.21
COL6A1-203ENST00000466285 AP4S1Q9Y587 144 aa16.38■□□□□ 0.21
COL6A1-203ENST00000466285 SLC33A1O00400 549 aaPredicted RBP16.37■□□□□ 0.21
COL6A1-203ENST00000466285 HSPB6O14558 160 aa16.37■□□□□ 0.21
COL6A1-203ENST00000466285 ATP5HO75947 161 aa16.37■□□□□ 0.21
COL6A1-203ENST00000466285 SERPINA3P01011 423 aa16.37■□□□□ 0.21
COL6A1-203ENST00000466285 ZNF20P17024 532 aa16.37■□□□□ 0.21
COL6A1-203ENST00000466285 CD34P28906 385 aa16.37■□□□□ 0.21
COL6A1-203ENST00000466285 OR3A4PP47883 348 aa16.37■□□□□ 0.21
COL6A1-203ENST00000466285 SCN1BQ07699 218 aa16.37■□□□□ 0.21
COL6A1-203ENST00000466285 DIAPH2-AS1Q14236 149 aa16.37■□□□□ 0.21
COL6A1-203ENST00000466285 CDK5R1Q15078 307 aa16.37■□□□□ 0.21
COL6A1-203ENST00000466285 KHDC1LQ5JSQ8 128 aa16.37■□□□□ 0.21
COL6A1-203ENST00000466285 LEAP2Q969E1 77 aa16.37■□□□□ 0.21
COL6A1-203ENST00000466285 C10orf35Q96D05 121 aa16.37■□□□□ 0.21
COL6A1-203ENST00000466285 RBM14Q96PK6 669 aaKnown RBP16.37■□□□□ 0.21
COL6A1-203ENST00000466285 OSBPL10Q9BXB5 764 aa16.37■□□□□ 0.21
COL6A1-203ENST00000466285 TRGV10A0A0A0MS01 117 aa16.36■□□□□ 0.21
COL6A1-203ENST00000466285 OR4C45A6NMZ5 311 aa16.36■□□□□ 0.21
COL6A1-203ENST00000466285 OR2F2O95006 317 aa16.36■□□□□ 0.21
COL6A1-203ENST00000466285 PF4P02776 101 aa16.36■□□□□ 0.21
COL6A1-203ENST00000466285 ZNF44P15621 663 aa16.36■□□□□ 0.21
COL6A1-203ENST00000466285 ATP6V1E1P36543 226 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms