RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 ABCG5Q9H222 651 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 MIXL1Q9H2W2 232 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 RHBDL2Q9NX52 303 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 RCC2Q9P258 522 aaKnown RBP9.3□□□□□ -0.92
VCP-204ENST00000466100 KAAG1Q9UBP8 84 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 DUX4Q9UBX2 424 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 METRNQ9UJH8 293 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 ARHGAP32A7KAX9 2087 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 TLN2Q9Y4G6 2542 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 SVEP1Q4LDE5 3571 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 HIVEP1P15822 2718 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 WNK2Q9Y3S1 2297 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 TRAV24A0A0B4J272 114 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 CEACAM18A8MTB9 384 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 RAB27BO00194 218 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 ZNF737O75373 536 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 OR2H2O95918 312 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 HAND1O96004 215 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 EIF4EP06730 217 aaKnown RBP9.29□□□□□ -0.92
VCP-204ENST00000466100 CPT2P23786 658 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 LMO1P25800 156 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 PRDX2P32119 198 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 NR4A2P43354 598 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 TAF9Q16594 264 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 MOGAT2Q3SYC2 334 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 UBE2NLQ5JXB2 153 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 METAP1DQ6UB28 335 aaPredicted RBP9.29□□□□□ -0.92
VCP-204ENST00000466100 FIP1L1Q6UN15 594 aaKnown RBP9.29□□□□□ -0.92
VCP-204ENST00000466100 LYPD2Q6UXB3 125 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 DCDC5Q6ZRR9 648 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 PEG10Q86TG7 708 aaKnown RBP9.29□□□□□ -0.92
VCP-204ENST00000466100 RTN4RL2Q86UN3 420 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 MUC20Q8N307 709 aaPredicted RBP9.29□□□□□ -0.92
VCP-204ENST00000466100 SAMD12Q8N8I0 201 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 MCFD2Q8NI22 146 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 CMTM3Q96MX0 182 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 PIMREGQ9BSJ6 248 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 COMMD3Q9UBI1 195 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 CTSZQ9UBR2 303 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 OR14J1Q9UGF5 321 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 MAB21L2Q9Y586 359 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 KIAA2026Q5HYC2 2103 aa9.29□□□□□ -0.92
VCP-204ENST00000466100 IGHV4-61A0A0C4DH41 118 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 TMEM82A0PJX8 343 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 SLC33A1O00400 549 aaPredicted RBP9.28□□□□□ -0.92
VCP-204ENST00000466100 CTDSP2O14595 271 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 SIGLEC5O15389 551 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 SOCS1O15524 211 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 NDUFA2O43678 99 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 PSPNO60542 156 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 HPGDSO60760 199 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 APOA1P02647 267 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 SELLP14151 372 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 CHATP28329 748 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 ART1P52961 327 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 TMEM50BP56557 158 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 IKZF1Q13422 519 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 PDCD1Q15116 288 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 KCNJ8Q15842 424 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 MZT2AQ6P582 158 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 C17orf107Q6ZR85 190 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 LAX1Q8IWV1 398 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 CMTM4Q8IZR5 234 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 FAM216BQ8N7L0 139 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 CCL13Q99616 98 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 GAL3ST1Q99999 423 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 URM1Q9BTM9 101 aaKnown RBP9.28□□□□□ -0.92
VCP-204ENST00000466100 MMP27Q9H306 513 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 PTTG2Q9NZH5 202 aa9.28□□□□□ -0.92
VCP-204ENST00000466100 ANK3Q12955 4377 aaKnown RBP9.27□□□□□ -0.92
VCP-204ENST00000466100 A0A0A6YYH2 397 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 ISPDA4D126 451 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 NKX6-3A6NJ46 265 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 A6NJ64 397 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 K7N7A8 449 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 SH2D1BO14796 132 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 PDCD6O75340 191 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 OR7C1O76099 320 aaPredicted RBP9.27□□□□□ -0.93
VCP-204ENST00000466100 IGHV2-5P01817 119 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 CHRM2P08172 466 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 SLC25A16P16260 332 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 ELK1P19419 428 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 GABRR1P24046 479 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 OR3A1P47881 315 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 VEGFCP49767 419 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 LMO4P61968 165 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 IL13RA1P78552 427 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 COL10A1Q03692 680 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 PLAC9Q5JTB6 97 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 SHEQ5VZ18 495 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 ZNF841Q6ZN19 808 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 FGFRL1Q8N441 504 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 ZNF561Q8N587 486 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 SPICQ8N5J4 248 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 CHST4Q8NCG5 386 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 ZNRF1Q8ND25 227 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 OR56B1Q8NGI3 324 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 CLDND2Q8NHS1 167 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 RAB40AQ8WXH6 277 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 WDFY2Q96P53 400 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms