RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 SLC2A1P11166 492 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 GABRG2P18507 467 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 DTYMKP23919 212 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 MAGEA12P43365 314 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 UBE2E1P51965 193 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 OR4D2P58180 307 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 OR10A3P58181 314 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 SRSF6Q13247 344 aaKnown RBP3.12□□□□□ -1.91
PTCD3-205ENST00000464541 TBC1D28Q2M2D7 210 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 CEACAM21Q3KPI0 293 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 ZNF684Q5T5D7 378 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 AVPI1Q5T686 147 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 CD200R1LQ6Q8B3 271 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 UGT2A3Q6UWM9 527 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 SMIM15Q7Z3B0 74 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 FAM19A1Q7Z5A9 133 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 RIBC1Q8N443 379 aaPredicted RBP3.12□□□□□ -1.91
PTCD3-205ENST00000464541 STOML3Q8TAV4 291 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 NELFBQ8WX92 580 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 AP3S1Q92572 193 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 DDIT4LQ96D03 193 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 SMIM12Q96EX1 92 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 NARS2Q96I59 477 aaKnown RBP3.12□□□□□ -1.91
PTCD3-205ENST00000464541 UBE2E2Q96LR5 201 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 ZNF488Q96MN9 340 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 GABRG3Q99928 467 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 DHRS9Q9BPW9 319 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 SULT4A1Q9BR01 284 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 TMEM208Q9BTX3 173 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 NUDT9Q9BW91 350 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 METTL9Q9H1A3 318 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 LHX5Q9H2C1 402 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 OR51B5Q9H339 312 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 C8orf4Q9NR00 106 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 FAM49BQ9NUQ9 324 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 FAM206AQ9NX38 181 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 MRPS18BQ9Y676 258 aaKnown RBP3.12□□□□□ -1.91
PTCD3-205ENST00000464541 ARL5AQ9Y689 179 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 ZNF233A6NK53 670 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 CXCR6O00574 342 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 ENTPD6O75354 484 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 GATBO75879 557 aaKnown RBP3.11□□□□□ -1.91
PTCD3-205ENST00000464541 GLSO94925 669 aaPredicted RBP3.11□□□□□ -1.91
PTCD3-205ENST00000464541 SOX14O95416 240 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 TCRBP04435 133 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 TYMSP04818 313 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 IFNA16P05015 189 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 PGA4P0DJD7 388 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 PGA3P0DJD8 388 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 ERGP11308 486 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 PSMA1P25786 263 aaKnown RBP3.11□□□□□ -1.91
PTCD3-205ENST00000464541 GALR1P47211 349 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 TTPAP49638 278 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 ERVS71-1P61550 626 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 IRF4Q15306 451 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 TOMM34Q15785 309 aaPredicted RBP3.11□□□□□ -1.91
PTCD3-205ENST00000464541 FAM78AQ5JUQ0 283 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 SYPL2Q5VXT5 272 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 CST9Q5W186 159 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 FAM131AQ6UXB0 335 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 NCCRP1Q6ZVX7 275 aaPredicted RBP3.11□□□□□ -1.91
PTCD3-205ENST00000464541 BLIDQ8IZY5 108 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 STK40Q8N2I9 435 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 UBAC2Q8NBM4 344 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 DTD1Q8TEA8 209 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 DYDC1Q8WWB3 177 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 RAB8BQ92930 207 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 RMI2Q96E14 147 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 COL21A1Q96P44 957 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 OR2M4Q96R27 311 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 ZNF382Q96SR6 550 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 TEAD3Q99594 435 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 UGT2B28Q9BY64 529 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 ULBP1Q9BZM6 244 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 ARV1Q9H2C2 271 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 TMEM27Q9HBJ8 222 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 MED4Q9NPJ6 270 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 DIABLOQ9NR28 239 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 FBXO8Q9NRD0 319 aa3.11□□□□□ -1.91
PTCD3-205ENST00000464541 DDX19AQ9NUU7 478 aaKnown RBP3.11□□□□□ -1.91
PTCD3-205ENST00000464541 ADAMTS13Q76LX8 1427 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 GPATCH8Q9UKJ3 1502 aaKnown RBP3.1□□□□□ -1.91
PTCD3-205ENST00000464541 C21orf140B9A014 251 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 ZNF207O43670 478 aaKnown RBP3.1□□□□□ -1.91
PTCD3-205ENST00000464541 CTNSO60931 367 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 CIAO1O76071 339 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 SLC22A5O76082 557 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 SERPINA1P01009 418 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 MMP7P09237 267 aaPredicted RBP3.1□□□□□ -1.91
PTCD3-205ENST00000464541 OR5H8P0DN80 308 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 THRAP10827 490 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 UCHL3P15374 230 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 ATF1P18846 271 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 ATF6P18850 670 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 RAB3BP20337 219 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 G0S2P27469 103 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 CEACAM6P40199 344 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 MTPNP58546 118 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 LSM6P62312 80 aaKnown RBP3.1□□□□□ -1.91
PTCD3-205ENST00000464541 IL5RAQ01344 420 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms