RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 C5orf49A4QMS7 147 aa13.97□□□□□ -0.17
SMC4-204ENST00000462787 C11orf94C9JXX5 98 aa13.97□□□□□ -0.17
SMC4-204ENST00000462787 TOX3O15405 576 aaPredicted RBP13.97□□□□□ -0.17
SMC4-204ENST00000462787 UPK3AO75631 287 aa13.97□□□□□ -0.17
SMC4-204ENST00000462787 GNG4P50150 75 aa13.97□□□□□ -0.17
SMC4-204ENST00000462787 ZNF816Q0VGE8 651 aaPredicted RBP13.97□□□□□ -0.17
SMC4-204ENST00000462787 OR10V1Q8NGI7 309 aa13.97□□□□□ -0.17
SMC4-204ENST00000462787 AQP3Q92482 292 aa13.97□□□□□ -0.17
SMC4-204ENST00000462787 NHSL1Q5SYE7 1610 aa13.97□□□□□ -0.17
SMC4-204ENST00000462787 A0A1B0GTQ1 180 aa13.97□□□□□ -0.17
SMC4-204ENST00000462787 BCAT2O15382 392 aaPredicted RBP13.97□□□□□ -0.17
SMC4-204ENST00000462787 ELOBQ15370 118 aa13.97□□□□□ -0.17
SMC4-204ENST00000462787 AGBL5Q8NDL9 886 aa13.97□□□□□ -0.17
SMC4-204ENST00000462787 OR11L1Q8NGX0 322 aa13.97□□□□□ -0.17
SMC4-204ENST00000462787 WDR13Q9H1Z4 485 aa13.97□□□□□ -0.17
SMC4-204ENST00000462787 MIA3Q5JRA6 1907 aa13.96□□□□□ -0.17
SMC4-204ENST00000462787 LNP1A1A4G5 178 aa13.96□□□□□ -0.17
SMC4-204ENST00000462787 NKX2-6A6NCS4 301 aa13.96□□□□□ -0.17
SMC4-204ENST00000462787 PCP4P48539 62 aa13.96□□□□□ -0.17
SMC4-204ENST00000462787 C16orf82Q7Z2V1 217 aa13.96□□□□□ -0.17
SMC4-204ENST00000462787 PAM16Q9Y3D7 125 aa13.96□□□□□ -0.17
SMC4-204ENST00000462787 CENPVL1A0A0U1RR11 272 aa13.96□□□□□ -0.17
SMC4-204ENST00000462787 A0A1W2PQD3 144 aa13.96□□□□□ -0.17
SMC4-204ENST00000462787 CD226Q15762 336 aa13.96□□□□□ -0.17
SMC4-204ENST00000462787 GSX1Q9H4S2 264 aaPredicted RBP13.96□□□□□ -0.17
SMC4-204ENST00000462787 ZNF253O75346 499 aa13.96□□□□□ -0.18
SMC4-204ENST00000462787 PPYP01298 95 aa13.96□□□□□ -0.18
SMC4-204ENST00000462787 MMP9P14780 707 aa13.96□□□□□ -0.18
SMC4-204ENST00000462787 B4GALT1P15291 398 aa13.96□□□□□ -0.18
SMC4-204ENST00000462787 PDE6DO43924 150 aa13.96□□□□□ -0.18
SMC4-204ENST00000462787 CT45A10P0DMU9 189 aa13.96□□□□□ -0.18
SMC4-204ENST00000462787 SRP14P37108 136 aaKnown RBP13.96□□□□□ -0.18
SMC4-204ENST00000462787 MDH2P40926 338 aaKnown RBP13.96□□□□□ -0.18
SMC4-204ENST00000462787 CCR5P51681 352 aa13.96□□□□□ -0.18
SMC4-204ENST00000462787 CCDC74BQ96LY2 380 aa13.96□□□□□ -0.18
SMC4-204ENST00000462787 SLC45A2Q9UMX9 530 aa13.96□□□□□ -0.18
SMC4-204ENST00000462787 WNK3Q9BYP7 1800 aa13.95□□□□□ -0.18
SMC4-204ENST00000462787 BGLAPP02818 100 aa13.95□□□□□ -0.18
SMC4-204ENST00000462787 DANCRP0C864 163 aa13.95□□□□□ -0.18
SMC4-204ENST00000462787 TMEM255AQ5JRV8 349 aa13.95□□□□□ -0.18
SMC4-204ENST00000462787 ACER2Q5QJU3 275 aa13.95□□□□□ -0.18
SMC4-204ENST00000462787 FAM219AQ8IW50 185 aa13.95□□□□□ -0.18
SMC4-204ENST00000462787 OR5AS1Q8N127 324 aa13.95□□□□□ -0.18
SMC4-204ENST00000462787 OR13G1Q8NGZ3 307 aa13.95□□□□□ -0.18
SMC4-204ENST00000462787 MRPL30Q8TCC3 161 aaKnown RBP13.95□□□□□ -0.18
SMC4-204ENST00000462787 THOC3Q96J01 351 aaKnown RBP13.95□□□□□ -0.18
SMC4-204ENST00000462787 IGHV3-9P01782 118 aa13.95□□□□□ -0.18
SMC4-204ENST00000462787 CD27P26842 260 aa13.95□□□□□ -0.18
SMC4-204ENST00000462787 P2RY4P51582 365 aa13.95□□□□□ -0.18
SMC4-204ENST00000462787 RRADP55042 308 aa13.95□□□□□ -0.18
SMC4-204ENST00000462787 FAM122AQ96E09 287 aa13.95□□□□□ -0.18
SMC4-204ENST00000462787 S1PR3Q99500 378 aa13.95□□□□□ -0.18
SMC4-204ENST00000462787 SLX1AQ9BQ83 275 aa13.95□□□□□ -0.18
SMC4-204ENST00000462787 HEXA-AS1Q9H8Q6 139 aa13.95□□□□□ -0.18
SMC4-204ENST00000462787 EFNB1P98172 346 aa13.95□□□□□ -0.18
SMC4-204ENST00000462787 APOBEC3DQ96AK3 386 aaPredicted RBP13.95□□□□□ -0.18
SMC4-204ENST00000462787 LRRC3BQ96PB8 259 aa13.95□□□□□ -0.18
SMC4-204ENST00000462787 LILRA5A6NI73 299 aa13.95□□□□□ -0.18
SMC4-204ENST00000462787 TTRP02766 147 aa13.95□□□□□ -0.18
SMC4-204ENST00000462787 RHOBP62745 196 aa13.95□□□□□ -0.18
SMC4-204ENST00000462787 ELSPBP1Q96BH3 223 aa13.95□□□□□ -0.18
SMC4-204ENST00000462787 MSL2Q9HCI7 577 aa13.95□□□□□ -0.18
SMC4-204ENST00000462787 LOC102723971A0A1B0GUV8 181 aa13.94□□□□□ -0.18
SMC4-204ENST00000462787 CYC1P08574 325 aa13.94□□□□□ -0.18
SMC4-204ENST00000462787 SERF2P84101 59 aa13.94□□□□□ -0.18
SMC4-204ENST00000462787 PDCD1Q15116 288 aa13.94□□□□□ -0.18
SMC4-204ENST00000462787 CNEP1R1Q8N9A8 125 aa13.94□□□□□ -0.18
SMC4-204ENST00000462787 OR6X1Q8NH79 312 aa13.94□□□□□ -0.18
SMC4-204ENST00000462787 ADAT3Q96EY9 351 aaPredicted RBP13.94□□□□□ -0.18
SMC4-204ENST00000462787 TUBA4BQ9H853 241 aa13.94□□□□□ -0.18
SMC4-204ENST00000462787 CTXND1A0A1B0GTU2 59 aa13.94□□□□□ -0.18
SMC4-204ENST00000462787 CYR61O00622 381 aa13.94□□□□□ -0.18
SMC4-204ENST00000462787 GYPAP02724 150 aa13.94□□□□□ -0.18
SMC4-204ENST00000462787 HOXC4P09017 264 aaPredicted RBP13.94□□□□□ -0.18
SMC4-204ENST00000462787 CD99P14209 185 aa13.94□□□□□ -0.18
SMC4-204ENST00000462787 TMEM211Q6ICI0 200 aa13.94□□□□□ -0.18
SMC4-204ENST00000462787 Q8IYB0 196 aa13.94□□□□□ -0.18
SMC4-204ENST00000462787 UTP23Q9BRU9 249 aaKnown RBP13.94□□□□□ -0.18
SMC4-204ENST00000462787 TGIF2-C20orf24A0A0A6YYL0 155 aa13.94□□□□□ -0.18
SMC4-204ENST00000462787 SIAH2O43255 324 aa13.94□□□□□ -0.18
SMC4-204ENST00000462787 PGA4P0DJD7 388 aa13.94□□□□□ -0.18
SMC4-204ENST00000462787 PGA5P0DJD9 388 aa13.94□□□□□ -0.18
SMC4-204ENST00000462787 GPM6AP51674 278 aa13.94□□□□□ -0.18
SMC4-204ENST00000462787 SUCLG1P53597 346 aaKnown RBP13.94□□□□□ -0.18
SMC4-204ENST00000462787 ROM1Q03395 351 aa13.94□□□□□ -0.18
SMC4-204ENST00000462787 PRR27Q6MZM9 219 aa13.94□□□□□ -0.18
SMC4-204ENST00000462787 YRDCQ86U90 279 aaKnown RBP13.94□□□□□ -0.18
SMC4-204ENST00000462787 NRTNQ99748 197 aa13.94□□□□□ -0.18
SMC4-204ENST00000462787 FOXB1Q99853 325 aa13.94□□□□□ -0.18
SMC4-204ENST00000462787 LANCL2Q9NS86 450 aa13.94□□□□□ -0.18
SMC4-204ENST00000462787 A0A1B0GU03 582 aa13.93□□□□□ -0.18
SMC4-204ENST00000462787 M0R1X1 148 aa13.93□□□□□ -0.18
SMC4-204ENST00000462787 GALNSP34059 522 aa13.93□□□□□ -0.18
SMC4-204ENST00000462787 C1QL3Q5VWW1 255 aa13.93□□□□□ -0.18
SMC4-204ENST00000462787 VN1R17PQ8TDU5 208 aa13.93□□□□□ -0.18
SMC4-204ENST00000462787 TEX50A0A1B0GTY4 177 aa13.93□□□□□ -0.18
SMC4-204ENST00000462787 KMT5CQ86Y97 462 aa13.93□□□□□ -0.18
SMC4-204ENST00000462787 KISS1RQ969F8 398 aaPredicted RBP13.93□□□□□ -0.18
SMC4-204ENST00000462787 P2RX4Q99571 388 aa13.93□□□□□ -0.18
SMC4-204ENST00000462787 NUDT16L1Q9BRJ7 211 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms