RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 CCDC182A6NF36 153 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 INMTO95050 263 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 FAM106CPP0CH98 169 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 OSMP13725 252 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 SNRPBP14678 240 aaKnown RBP8.56□□□□□ -1.04
CBX3-205ENST00000462165 CCL1P22362 96 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 CDK2P24941 298 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 CHATP28329 748 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 GDNFP39905 211 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 MNDAP41218 407 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 OR3A1P47881 315 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 FUT6P51993 359 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 ACTR3P61158 418 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 SLC35B1P78383 322 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 UBE2V2Q15819 145 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 FAM98BQ52LJ0 330 aaKnown RBP8.56□□□□□ -1.04
CBX3-205ENST00000462165 TPTE2P1Q5T6R2 138 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 SLC25A26Q70HW3 274 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 ZNF695Q8IW36 515 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 PRR25Q96S07 402 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 ASCL2Q99929 193 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 APOL4Q9BPW4 351 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 ZNF286AQ9HBT8 521 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 GLS2Q9UI32 602 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 SNX5Q9Y5X3 404 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 PLECQ15149 4684 aaKnown RBP8.56□□□□□ -1.04
CBX3-205ENST00000462165 A0A087X0M5 115 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 TRBV2A0A0J9YWF9 115 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 A0A1B0GX30 115 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 J3QL48 77 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 CCL24O00175 119 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 TOR1AO14656 332 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 FGF16O43320 207 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 ENTPD6O75354 484 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 GATBO75879 557 aaKnown RBP8.55□□□□□ -1.04
CBX3-205ENST00000462165 CST1P01037 141 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 SNRNP70P08621 437 aaKnown RBP8.55□□□□□ -1.04
CBX3-205ENST00000462165 NPBWR2P48146 333 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 LUMP51884 338 aaPredicted RBP8.55□□□□□ -1.04
CBX3-205ENST00000462165 PRRX1P54821 245 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 CDC42P60953 191 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 CXCR4P61073 352 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 C9orf66Q5T8R8 295 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 ZNF322Q6U7Q0 402 aaPredicted RBP8.55□□□□□ -1.04
CBX3-205ENST00000462165 PLEKHG7Q6ZR37 379 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 TMEM179BQ7Z7N9 219 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 FAM58AQ8N1B3 248 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 C5orf56Q8N8D9 126 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 BORCS8Q96FH0 119 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 RAX2Q96IS3 184 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 DUX3Q96PT4 197 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 TEX12Q9BXU0 123 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 PLEKHA1Q9HB21 404 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 SLC25A19Q9HC21 320 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 PCDHB16Q9NRJ7 776 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 RBFOX1Q9NWB1 397 aaKnown RBP8.55□□□□□ -1.04
CBX3-205ENST00000462165 TAGLN3Q9UI15 199 aa8.55□□□□□ -1.04
CBX3-205ENST00000462165 FUOMA2VDF0 154 aa8.54□□□□□ -1.04
CBX3-205ENST00000462165 SERPINE3A8MV23 424 aa8.54□□□□□ -1.04
CBX3-205ENST00000462165 MAGEB4O15481 346 aaPredicted RBP8.54□□□□□ -1.04
CBX3-205ENST00000462165 IGHG2P01859 326 aa8.54□□□□□ -1.04
CBX3-205ENST00000462165 RAP2AP10114 183 aa8.54□□□□□ -1.04
CBX3-205ENST00000462165 PRKACAP17612 351 aa8.54□□□□□ -1.04
CBX3-205ENST00000462165 BCL3P20749 454 aa8.54□□□□□ -1.04
CBX3-205ENST00000462165 DUSP1P28562 367 aa8.54□□□□□ -1.04
CBX3-205ENST00000462165 PTGFRP43088 359 aa8.54□□□□□ -1.04
CBX3-205ENST00000462165 RAB25P57735 213 aa8.54□□□□□ -1.04
CBX3-205ENST00000462165 KPNB1Q14974 876 aaKnown RBP8.54□□□□□ -1.04
CBX3-205ENST00000462165 SPIN3Q5JUX0 258 aa8.54□□□□□ -1.04
CBX3-205ENST00000462165 TMEM236Q5W0B7 351 aa8.54□□□□□ -1.04
CBX3-205ENST00000462165 DHFR2Q86XF0 187 aa8.54□□□□□ -1.04
CBX3-205ENST00000462165 STPG2Q8N412 459 aa8.54□□□□□ -1.04
CBX3-205ENST00000462165 CCDC54Q8NEL0 328 aa8.54□□□□□ -1.04
CBX3-205ENST00000462165 Q8NFD4 153 aa8.54□□□□□ -1.04
CBX3-205ENST00000462165 OR5M8Q8NGP6 311 aa8.54□□□□□ -1.04
CBX3-205ENST00000462165 CNN2Q99439 309 aaKnown RBP8.54□□□□□ -1.04
CBX3-205ENST00000462165 MNTQ99583 582 aa8.54□□□□□ -1.04
CBX3-205ENST00000462165 CHST5Q9GZS9 411 aa8.54□□□□□ -1.04
CBX3-205ENST00000462165 ZNF556Q9HAH1 456 aa8.54□□□□□ -1.04
CBX3-205ENST00000462165 ARL8BQ9NVJ2 186 aa8.54□□□□□ -1.04
CBX3-205ENST00000462165 TVP23BQ9NYZ1 205 aa8.54□□□□□ -1.04
CBX3-205ENST00000462165 MRM2Q9UI43 246 aaKnown RBP8.54□□□□□ -1.04
CBX3-205ENST00000462165 LINC00527Q9UJ94 153 aa8.54□□□□□ -1.04
CBX3-205ENST00000462165 SIRPB1O00241 398 aa8.53□□□□□ -1.04
CBX3-205ENST00000462165 SYT7O43581 403 aa8.53□□□□□ -1.04
CBX3-205ENST00000462165 SNX3O60493 162 aa8.53□□□□□ -1.04
CBX3-205ENST00000462165 OR2H2O95918 312 aa8.53□□□□□ -1.04
CBX3-205ENST00000462165 CYB5AP00167 134 aa8.53□□□□□ -1.04
CBX3-205ENST00000462165 CSN2P05814 226 aa8.53□□□□□ -1.04
CBX3-205ENST00000462165 ANXA8P13928 327 aa8.53□□□□□ -1.04
CBX3-205ENST00000462165 ECI1P42126 302 aa8.53□□□□□ -1.04
CBX3-205ENST00000462165 GLIPR1P48060 266 aa8.53□□□□□ -1.04
CBX3-205ENST00000462165 RBP2P50120 134 aa8.53□□□□□ -1.04
CBX3-205ENST00000462165 AESQ08117 197 aa8.53□□□□□ -1.04
CBX3-205ENST00000462165 DOC2BQ14184 412 aa8.53□□□□□ -1.04
CBX3-205ENST00000462165 TRIM25Q14258 630 aaKnown RBP8.53□□□□□ -1.04
CBX3-205ENST00000462165 RBM39Q14498 530 aaKnown RBP8.53□□□□□ -1.04
CBX3-205ENST00000462165 TEX38Q6PEX7 206 aa8.53□□□□□ -1.04
CBX3-205ENST00000462165 SLC35E3Q7Z769 313 aa8.53□□□□□ -1.04
CBX3-205ENST00000462165 FOXRED2Q8IWF2 684 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms