RNA–Protein interactions for RNA: ENST00000461173.5

DHFR2-203, Transcript of dihydrofolate reductase 2, humanhuman

TSL 1 (best)

Gene DHFR2, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-203ENST00000461173 ARV1Q9H2C2 271 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 SPACA1Q9HBV2 294 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 SLC2A9Q9NRM0 540 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 CARHSP1Q9Y2V2 147 aaKnown RBP8.5□□□□□ -1.05
DHFR2-203ENST00000461173 SHANK1Q9Y566 2161 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 DUXBA0A1W2PPF3 345 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 M0R296 226 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 APOC3P02656 99 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 SP1P08047 785 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 DUSP1P28562 367 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 RPL12P30050 165 aaKnown RBP8.5□□□□□ -1.05
DHFR2-203ENST00000461173 FCGR2CP31995 323 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 SULT1A2P50226 295 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 RRADP55042 308 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 SOX8P57073 446 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 PJVKQ0ZLH3 352 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 IL13RA2Q14627 380 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 SLC22A25Q6T423 547 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 SLC25A26Q70HW3 274 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 LDLRAD3Q86YD5 345 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 CALHM1Q8IU99 346 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 TUSC5Q8IXB3 177 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 SPAG16Q8N0X2 631 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 SVBPQ8N300 66 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 ZFP62Q8NB50 900 aaPredicted RBP8.5□□□□□ -1.05
DHFR2-203ENST00000461173 TMED6Q8WW62 240 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 POM121L2Q96KW2 1035 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 TAF9BQ9HBM6 251 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 GSKIPQ9P0R6 139 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 MPC1Q9Y5U8 109 aa8.5□□□□□ -1.05
DHFR2-203ENST00000461173 KIR2DS1A0A191URI9 304 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 OR5B21A6NL26 309 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 CDX4O14627 284 aaPredicted RBP8.49□□□□□ -1.05
DHFR2-203ENST00000461173 ABCD4O14678 606 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 CDS2O95674 445 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 WNT2P09544 360 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 ITGA3P26006 1051 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 MAGEA5P43359 124 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 KIR2DS4P43632 304 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 KCNJ3P48549 501 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 S100A10P60903 97 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 HERV-K104P61576 105 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 POLR2GP62487 172 aaKnown RBP eCLIP8.49□□□□□ -1.05
DHFR2-203ENST00000461173 PLP2Q04941 152 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 SPEM2Q0P670 501 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 PRDX4Q13162 271 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 KIR2DS1Q14954 304 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 LPAL2Q16609 132 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 RSPO4Q2I0M5 234 aaPredicted RBP8.49□□□□□ -1.05
DHFR2-203ENST00000461173 MST1LQ2TV78 715 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 ZNF600Q6ZNG1 722 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 MRPL21Q7Z2W9 205 aaKnown RBP8.49□□□□□ -1.05
DHFR2-203ENST00000461173 COMMD1Q8N668 190 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 LYPD6BQ8NI32 183 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 GLYATL2Q8WU03 294 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 HPSE2Q8WWQ2 592 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 MRPL24Q96A35 216 aaKnown RBP8.49□□□□□ -1.05
DHFR2-203ENST00000461173 LRRC46Q96FV0 321 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 MARS2Q96GW9 593 aaKnown RBP8.49□□□□□ -1.05
DHFR2-203ENST00000461173 USB1Q9BQ65 265 aaKnown RBP8.49□□□□□ -1.05
DHFR2-203ENST00000461173 PAPOLGQ9BWT3 736 aaKnown RBP8.49□□□□□ -1.05
DHFR2-203ENST00000461173 SEC11CQ9BY50 192 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 ZNF442Q9H7R0 627 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 PARP11Q9NR21 331 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 ASF1BQ9NVP2 202 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 PRR13Q9NZ81 148 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 AMDHD2Q9Y303 409 aa8.49□□□□□ -1.05
DHFR2-203ENST00000461173 TUSC2O75896 110 aa8.48□□□□□ -1.05
DHFR2-203ENST00000461173 OR7C1O76099 320 aaPredicted RBP8.48□□□□□ -1.05
DHFR2-203ENST00000461173 DIRAS3O95661 229 aa8.48□□□□□ -1.05
DHFR2-203ENST00000461173 PLATP00750 562 aa8.48□□□□□ -1.05
DHFR2-203ENST00000461173 PPYP01298 95 aa8.48□□□□□ -1.05
DHFR2-203ENST00000461173 OR5AC1P0C628 307 aa8.48□□□□□ -1.05
DHFR2-203ENST00000461173 CD82P27701 267 aa8.48□□□□□ -1.05
DHFR2-203ENST00000461173 P2RY1P47900 373 aa8.48□□□□□ -1.05
DHFR2-203ENST00000461173 CAV2P51636 162 aa8.48□□□□□ -1.05
DHFR2-203ENST00000461173 LILRB2Q8N423 598 aa8.48□□□□□ -1.05
DHFR2-203ENST00000461173 BHLHE23Q8NDY6 225 aa8.48□□□□□ -1.05
DHFR2-203ENST00000461173 OR5L1Q8NGL2 311 aa8.48□□□□□ -1.05
DHFR2-203ENST00000461173 NANOS1Q8WY41 292 aaKnown RBP8.48□□□□□ -1.05
DHFR2-203ENST00000461173 EXTL1Q92935 676 aa8.48□□□□□ -1.05
DHFR2-203ENST00000461173 TMEM56Q96MV1 263 aa8.48□□□□□ -1.05
DHFR2-203ENST00000461173 PRRG4Q9BZD6 226 aa8.48□□□□□ -1.05
DHFR2-203ENST00000461173 PKIBQ9C010 78 aa8.48□□□□□ -1.05
DHFR2-203ENST00000461173 NKX6-2Q9C056 277 aaPredicted RBP8.48□□□□□ -1.05
DHFR2-203ENST00000461173 Q9N2K0 584 aa8.48□□□□□ -1.05
DHFR2-203ENST00000461173 ZNF629Q9UEG4 869 aaPredicted RBP8.48□□□□□ -1.05
DHFR2-203ENST00000461173 TMEM56-RWDD3S4R434 201 aa8.48□□□□□ -1.05
DHFR2-203ENST00000461173 GPR179Q6PRD1 2367 aa8.48□□□□□ -1.05
DHFR2-203ENST00000461173 SPEGQ15772 3267 aa8.48□□□□□ -1.05
DHFR2-203ENST00000461173 C5orf49A4QMS7 147 aa8.47□□□□□ -1.05
DHFR2-203ENST00000461173 PCP4L1A6NKN8 68 aa8.47□□□□□ -1.05
DHFR2-203ENST00000461173 CD300LBA8K4G0 201 aa8.47□□□□□ -1.05
DHFR2-203ENST00000461173 ZNF705EA8MWA4 302 aaPredicted RBP8.47□□□□□ -1.05
DHFR2-203ENST00000461173 DNASE2O00115 360 aaPredicted RBP8.47□□□□□ -1.05
DHFR2-203ENST00000461173 GPR137BO60478 399 aa8.47□□□□□ -1.05
DHFR2-203ENST00000461173 LRP3O75074 770 aa8.47□□□□□ -1.05
DHFR2-203ENST00000461173 TK1P04183 234 aa8.47□□□□□ -1.05
DHFR2-203ENST00000461173 CELA3AP09093 270 aa8.47□□□□□ -1.05
DHFR2-203ENST00000461173 H2AFB1P0C5Y9 115 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms