RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 GPR176Q14439 515 aa13.28□□□□□ -0.28
CD28-203ENST00000458610 TRAM1Q15629 374 aa13.28□□□□□ -0.28
CD28-203ENST00000458610 GRK1Q15835 563 aa13.28□□□□□ -0.28
CD28-203ENST00000458610 TUSC1Q2TAM9 212 aa13.28□□□□□ -0.28
CD28-203ENST00000458610 KRTAP24-1Q3LI83 254 aa13.28□□□□□ -0.28
CD28-203ENST00000458610 BCL6BQ8N143 479 aaPredicted RBP13.28□□□□□ -0.28
CD28-203ENST00000458610 OR4M1Q8NGD0 313 aa13.28□□□□□ -0.28
CD28-203ENST00000458610 UFD1Q92890 307 aa13.28□□□□□ -0.28
CD28-203ENST00000458610 DERL3Q96Q80 235 aa13.28□□□□□ -0.28
CD28-203ENST00000458610 YTHDF1Q9BYJ9 559 aaKnown RBP13.28□□□□□ -0.28
CD28-203ENST00000458610 HEXA-AS1Q9H8Q6 139 aa13.28□□□□□ -0.28
CD28-203ENST00000458610 C19orf12Q9NSK7 152 aa13.28□□□□□ -0.28
CD28-203ENST00000458610 ING4Q9UNL4 249 aa13.28□□□□□ -0.28
CD28-203ENST00000458610 SF3B6Q9Y3B4 125 aaKnown RBP13.28□□□□□ -0.28
CD28-203ENST00000458610 FAM96BQ9Y3D0 163 aa13.28□□□□□ -0.28
CD28-203ENST00000458610 ANK3Q12955 4377 aaKnown RBP13.27□□□□□ -0.28
CD28-203ENST00000458610 CALCBP10092 127 aa13.27□□□□□ -0.29
CD28-203ENST00000458610 ZNF44P15621 663 aa13.27□□□□□ -0.29
CD28-203ENST00000458610 PSMA1P25786 263 aaKnown RBP13.27□□□□□ -0.29
CD28-203ENST00000458610 ERP29P30040 261 aaKnown RBP13.27□□□□□ -0.29
CD28-203ENST00000458610 SNU13P55769 128 aaKnown RBP13.27□□□□□ -0.29
CD28-203ENST00000458610 SCN1BQ07699 218 aa13.27□□□□□ -0.29
CD28-203ENST00000458610 ACSM3Q53FZ2 586 aa13.27□□□□□ -0.29
CD28-203ENST00000458610 ASPHD2Q6ICH7 369 aa13.27□□□□□ -0.29
CD28-203ENST00000458610 BRD3OSQ6XYD6 125 aa13.27□□□□□ -0.29
CD28-203ENST00000458610 Q8N7P7 452 aa13.27□□□□□ -0.29
CD28-203ENST00000458610 NKAIN3Q8N8D7 197 aa13.27□□□□□ -0.29
CD28-203ENST00000458610 FAM216AQ8WUB2 273 aa13.27□□□□□ -0.29
CD28-203ENST00000458610 OR5M11Q96RB7 305 aa13.27□□□□□ -0.29
CD28-203ENST00000458610 C19orf24Q9BVV8 132 aa13.27□□□□□ -0.29
CD28-203ENST00000458610 PRDM13Q9H4Q3 707 aa13.27□□□□□ -0.29
CD28-203ENST00000458610 SIRT7Q9NRC8 400 aa13.27□□□□□ -0.29
CD28-203ENST00000458610 LSM2Q9Y333 95 aaKnown RBP13.27□□□□□ -0.29
CD28-203ENST00000458610 A0A1W2PPK0 400 aa13.26□□□□□ -0.29
CD28-203ENST00000458610 TMEM82A0PJX8 343 aa13.26□□□□□ -0.29
CD28-203ENST00000458610 CLDN34H7C241 214 aa13.26□□□□□ -0.29
CD28-203ENST00000458610 SIRPB1O00241 398 aa13.26□□□□□ -0.29
CD28-203ENST00000458610 HTR3BO95264 441 aa13.26□□□□□ -0.29
CD28-203ENST00000458610 OR2H2O95918 312 aa13.26□□□□□ -0.29
CD28-203ENST00000458610 HSMCR30P0CW71 290 aa13.26□□□□□ -0.29
CD28-203ENST00000458610 UBE2E1P51965 193 aa13.26□□□□□ -0.29
CD28-203ENST00000458610 ERVFRD-1P60508 538 aa13.26□□□□□ -0.29
CD28-203ENST00000458610 TPBGQ13641 420 aa13.26□□□□□ -0.29
CD28-203ENST00000458610 IL13RA2Q14627 380 aa13.26□□□□□ -0.29
CD28-203ENST00000458610 CRIP3Q6Q6R5 217 aa13.26□□□□□ -0.29
CD28-203ENST00000458610 C17orf107Q6ZR85 190 aa13.26□□□□□ -0.29
CD28-203ENST00000458610 RNF144BQ7Z419 303 aa13.26□□□□□ -0.29
CD28-203ENST00000458610 Q8NFD4 153 aa13.26□□□□□ -0.29
CD28-203ENST00000458610 OR51T1Q8NGJ9 327 aa13.26□□□□□ -0.29
CD28-203ENST00000458610 PHYHIPQ92561 330 aa13.26□□□□□ -0.29
CD28-203ENST00000458610 SLITRK2Q9H156 845 aa13.26□□□□□ -0.29
CD28-203ENST00000458610 TCF7L1Q9HCS4 588 aa13.26□□□□□ -0.29
CD28-203ENST00000458610 IL36GQ9NZH8 169 aa13.26□□□□□ -0.29
CD28-203ENST00000458610 RBP4P02753 201 aa13.25□□□□□ -0.29
CD28-203ENST00000458610 MAS1P04201 325 aa13.25□□□□□ -0.29
CD28-203ENST00000458610 ZNF728P0DKX0 622 aa13.25□□□□□ -0.29
CD28-203ENST00000458610 OR3A4PP47883 348 aa13.25□□□□□ -0.29
CD28-203ENST00000458610 GABARAPL2P60520 117 aa13.25□□□□□ -0.29
CD28-203ENST00000458610 SRSF2Q01130 221 aaKnown RBP13.25□□□□□ -0.29
CD28-203ENST00000458610 MLLT11Q13015 90 aaPredicted RBP13.25□□□□□ -0.29
CD28-203ENST00000458610 EDDM3AQ14507 147 aa13.25□□□□□ -0.29
CD28-203ENST00000458610 DEFB112Q30KQ8 113 aa13.25□□□□□ -0.29
CD28-203ENST00000458610 RUSC1-AS1Q66K80 236 aa13.25□□□□□ -0.29
CD28-203ENST00000458610 UNQ9370/PRO34162Q6UXP9 181 aa13.25□□□□□ -0.29
CD28-203ENST00000458610 SVOPQ8N4V2 548 aa13.25□□□□□ -0.29
CD28-203ENST00000458610 JAGN1Q8N5M9 183 aa13.25□□□□□ -0.29
CD28-203ENST00000458610 ZDHHC22Q8N966 263 aa13.25□□□□□ -0.29
CD28-203ENST00000458610 SGCDQ92629 289 aa13.25□□□□□ -0.29
CD28-203ENST00000458610 TNFRSF14Q92956 283 aa13.25□□□□□ -0.29
CD28-203ENST00000458610 SLC25A28Q96A46 364 aa13.25□□□□□ -0.29
CD28-203ENST00000458610 FOXRED1Q96CU9 486 aaPredicted RBP13.25□□□□□ -0.29
CD28-203ENST00000458610 NR1H4Q96RI1 486 aaPredicted RBP13.25□□□□□ -0.29
CD28-203ENST00000458610 MGLLQ99685 303 aa13.25□□□□□ -0.29
CD28-203ENST00000458610 TMED9Q9BVK6 235 aa13.25□□□□□ -0.29
CD28-203ENST00000458610 IL36RNQ9UBH0 155 aa13.25□□□□□ -0.29
CD28-203ENST00000458610 TRAV8-7A0A075B6U6 113 aa13.24□□□□□ -0.29
CD28-203ENST00000458610 A0A0G2JK05 382 aa13.24□□□□□ -0.29
CD28-203ENST00000458610 RNASEK-C17orf49H0YIS7 233 aa13.24□□□□□ -0.29
CD28-203ENST00000458610 NPFFO15130 113 aa13.24□□□□□ -0.29
CD28-203ENST00000458610 PSPNO60542 156 aa13.24□□□□□ -0.29
CD28-203ENST00000458610 CSN2P05814 226 aa13.24□□□□□ -0.29
CD28-203ENST00000458610 GTF2F2P13984 249 aa13.24□□□□□ -0.29
CD28-203ENST00000458610 RANBP1P43487 201 aa13.24□□□□□ -0.29
CD28-203ENST00000458610 P2RX3P56373 397 aa13.24□□□□□ -0.29
CD28-203ENST00000458610 UBA52P62987 128 aaKnown RBP13.24□□□□□ -0.29
CD28-203ENST00000458610 TBCEQ15813 527 aaPredicted RBP13.24□□□□□ -0.29
CD28-203ENST00000458610 LIPKQ5VXJ0 399 aa13.24□□□□□ -0.29
CD28-203ENST00000458610 ZNF367Q7RTV3 350 aa13.24□□□□□ -0.29
CD28-203ENST00000458610 CEACAM19Q7Z692 300 aa13.24□□□□□ -0.29
CD28-203ENST00000458610 LINC00596Q86U02 117 aa13.24□□□□□ -0.29
CD28-203ENST00000458610 PDZD9Q8IXQ8 264 aa13.24□□□□□ -0.29
CD28-203ENST00000458610 OSR2Q8N2R0 312 aa13.24□□□□□ -0.29
CD28-203ENST00000458610 TMEM86BQ8N661 226 aa13.24□□□□□ -0.29
CD28-203ENST00000458610 OR4S1Q8NGB4 309 aa13.24□□□□□ -0.29
CD28-203ENST00000458610 ORAI1Q96D31 301 aa13.24□□□□□ -0.29
CD28-203ENST00000458610 MRPS24Q96EL2 167 aaKnown RBP13.24□□□□□ -0.29
CD28-203ENST00000458610 ZNF48Q96MX3 618 aaPredicted RBP13.24□□□□□ -0.29
CD28-203ENST00000458610 ZNF714Q96N38 554 aa13.24□□□□□ -0.29
CD28-203ENST00000458610 UQCC2Q9BRT2 126 aa13.24□□□□□ -0.29
CD28-203ENST00000458610 BARHL1Q9BZE3 327 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms