RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ST6GALNAC5Q9BVH7 336 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 TM2D1Q9BX74 207 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 LOC102724200A0A096LPH7 203 aaPredicted RBP3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 C1QTNF9BB2RNN3 333 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 CLPSP04118 112 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 CELA2BP08218 269 aaPredicted RBP3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 OR5AC1P0C628 307 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 DEFB103AP81534 67 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 FOXO1Q12778 655 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 LCN12Q6JVE5 192 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 TAF8Q7Z7C8 310 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 PRR22Q8IZ63 422 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 FAM131CQ96AQ9 280 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 ADAM29Q9UKF5 820 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 NCKAP5O14513 1909 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 AGFG2O95081 481 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 PTBP3O95758 552 aaKnown RBP3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 LCATP04180 440 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 SEC11BP0C7V7 166 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 SNU13P55769 128 aaKnown RBP3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 KIAA1644Q3SXP7 199 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 C1orf194Q5T5A4 169 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 ZNF619Q8N2I2 560 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 TMEM252Q8N6L7 170 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 CLDND2Q8NHS1 167 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 SARAFQ96BY9 339 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 OR6C1Q96RD1 312 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 GINS3Q9BRX5 216 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 SERINC1Q9NRX5 453 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 C19orf12Q9NSK7 152 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 FOXJ2Q9P0K8 574 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 OTOGQ6ZRI0 2925 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 S100A2P29034 98 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 NTF4P34130 210 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 CTRLP40313 264 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 EMP2P54851 167 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 ERVFC1-1P60608 527 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 PDGFRLQ15198 375 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 ADGRE4PQ86SQ3 457 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 ZNF429Q86V71 674 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 TMEM183AQ8IXX5 376 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 Q8N7P7 452 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 IMMP2LQ96T52 175 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 RAB18Q9NP72 206 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 SLC13A4Q9UKG4 626 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 RARRES3Q9UL19 164 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 LHFPL6Q9Y693 200 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 IGKV1-27A0A075B6S5 117 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 FSTP19883 344 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 MAOAP21397 527 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 EIF1AXP47813 144 aaKnown RBP3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 AFF3P51826 1226 aaKnown RBP3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 LINC00205P59089 165 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 PHLDA2Q53GA4 152 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 ALG10Q5BKT4 473 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 VAX1Q5SQQ9 334 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 AKR1C8PQ5T2L2 129 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 ZNF66Q6ZN08 573 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 FAM57BQ71RH2 274 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 C1orf87Q8N0U7 546 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 TMEM217Q8N7C4 229 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 BOD1Q96IK1 185 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 PBDC1Q9BVG4 233 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 FAM206AQ9NX38 181 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 F8P00451 2351 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 A0A0A6YYH2 397 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 IGKV1D-13A0A0B4J2D9 117 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 A6NJ64 397 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 TMEM212A6NML5 194 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 FTCDNL1E5RQL4 147 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 EIF1AYO14602 144 aaKnown RBP3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 TP53I11O14683 189 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 RER1O15258 196 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 SCGNO76038 276 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 DBIP07108 87 aaKnown RBP3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 SPARCP09486 303 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 IGKV1-13P0DP09 117 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 AKR1A1P14550 325 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 PGCP20142 388 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 ALDH3B1P43353 468 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 OR3A1P47881 315 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 PDLIM4P50479 330 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 SEC13P55735 322 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 PMS2P11Q13670 270 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 HLA-BQ31612 363 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 ZNF468Q5VIY5 522 aaPredicted RBP3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 DCXRQ7Z4W1 244 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 STX12Q86Y82 276 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 OR5L2Q8NGL0 311 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 OR5R1Q8NH85 324 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 MFSD8Q8NHS3 518 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 ZNF519Q8TB69 540 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 APOOQ9BUR5 198 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 GPR87Q9BY21 358 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 TUBD1Q9UJT1 453 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 RNF24Q9Y225 148 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 FUT9Q9Y231 359 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms