RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 LOC100130705A0A1B0GUX0 176 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 ODF3BA8MYP8 253 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 PSPNO60542 156 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 MT-ND2P03891 347 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 GABRB1P18505 474 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 RAB40BQ12829 278 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 ZNF626Q68DY1 528 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 SYS1Q8N2H4 156 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 PQLC1Q8N2U9 271 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 OR5D18Q8NGL1 313 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 OR5D14Q8NGL3 314 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 RHOXF1Q8NHV9 184 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 RPS4Y2Q8TD47 263 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 SPACA5Q96QH8 159 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 NKX3-1Q99801 234 aaPredicted RBP10.43□□□□□ -0.74
CHD3-206ENST00000452447 SLC29A1Q99808 456 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 COMMD4Q9H0A8 199 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 ZCCHC4Q9H5U6 513 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 ISG20L2Q9H9L3 353 aaKnown RBP10.43□□□□□ -0.74
CHD3-206ENST00000452447 EXOSC4Q9NPD3 245 aaKnown RBP10.43□□□□□ -0.74
CHD3-206ENST00000452447 INPP5EQ9NRR6 644 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 PITPNC1Q9UKF7 332 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 FUOMA2VDF0 154 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 TMEM212A6NML5 194 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 SIRPB1O00241 398 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 ATP6V1G2O95670 118 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 HCKP08631 526 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 RAB13P51153 203 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 EFNB2P52799 333 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 GBX2P52951 348 aaPredicted RBP10.43□□□□□ -0.74
CHD3-206ENST00000452447 SCN1BQ07699 218 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 MRPL28Q13084 256 aaKnown RBP10.43□□□□□ -0.74
CHD3-206ENST00000452447 CRIP3Q6Q6R5 217 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 TCF23Q7RTU1 214 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 SERPINA12Q8IW75 414 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 OR4S1Q8NGB4 309 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 PIFOQ8TCI5 191 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 CDCA4Q9BXL8 241 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 ERVK13-1Q9NX77 482 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 DHDHQ9UQ10 334 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 UBE2J1Q9Y385 318 aaPredicted RBP10.43□□□□□ -0.74
CHD3-206ENST00000452447 RPL36Q9Y3U8 105 aaKnown RBP10.43□□□□□ -0.74
CHD3-206ENST00000452447 SESN1Q9Y6P5 492 aa10.43□□□□□ -0.74
CHD3-206ENST00000452447 TRGV10A0A0A0MS01 117 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 IGKV1-12A0A0C4DH73 117 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 CHST1O43916 411 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 KDM4BO94953 1096 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 ZFPL1O95159 310 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 OR2H2O95918 312 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 IGKV1D-12P01611 117 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 CSF1P09603 554 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 CCDC159P0C7I6 412 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 ZNF44P15621 663 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 ERP29P30040 261 aaKnown RBP10.42□□□□□ -0.74
CHD3-206ENST00000452447 P2RX3P56373 397 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 SLC34A1Q06495 639 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 HERPUD1Q15011 391 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 KLHL22Q53GT1 634 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 MINOS1Q5TGZ0 78 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 SAXO1Q8IYX7 474 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 DYNAPQ8N1N2 210 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 OR5AK2Q8NH90 309 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 FAM110DQ8TAY7 271 aaPredicted RBP10.42□□□□□ -0.74
CHD3-206ENST00000452447 NDNFQ8TB73 568 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 HAVCR2Q8TDQ0 301 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 TSEN15Q8WW01 171 aaKnown RBP10.42□□□□□ -0.74
CHD3-206ENST00000452447 TMEM133Q9H2Q1 129 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 RHOFQ9HBH0 211 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 FAM118AQ9NWS6 357 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 TCF19Q9Y242 345 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 MINOS1-NBL1R4GNA1 71 aa10.42□□□□□ -0.74
CHD3-206ENST00000452447 IGHV2-26A0A0B4J1V2 119 aa10.41□□□□□ -0.74
CHD3-206ENST00000452447 H3BUI4 141 aa10.41□□□□□ -0.74
CHD3-206ENST00000452447 F2RL2O00254 374 aa10.41□□□□□ -0.74
CHD3-206ENST00000452447 SULT1B1O43704 296 aa10.41□□□□□ -0.74
CHD3-206ENST00000452447 TSPAN15O95858 294 aa10.41□□□□□ -0.74
CHD3-206ENST00000452447 TMEM225BP0DP42 221 aa10.41□□□□□ -0.74
CHD3-206ENST00000452447 OR3A1P47881 315 aa10.41□□□□□ -0.74
CHD3-206ENST00000452447 KISS1Q15726 138 aa10.41□□□□□ -0.74
CHD3-206ENST00000452447 KLHDC1Q8N7A1 406 aa10.41□□□□□ -0.74
CHD3-206ENST00000452447 C11orf44Q8N8P7 122 aa10.41□□□□□ -0.74
CHD3-206ENST00000452447 ZNF555Q8NEP9 628 aa10.41□□□□□ -0.74
CHD3-206ENST00000452447 PDCD1LG2Q9BQ51 273 aa10.41□□□□□ -0.74
CHD3-206ENST00000452447 CLEC7AQ9BXN2 247 aa10.41□□□□□ -0.74
CHD3-206ENST00000452447 GAL3ST2Q9H3Q3 398 aa10.41□□□□□ -0.74
CHD3-206ENST00000452447 HILPDAQ9Y5L2 63 aa10.41□□□□□ -0.74
CHD3-206ENST00000452447 MAGEB3O15480 346 aa10.4□□□□□ -0.74
CHD3-206ENST00000452447 ALX3O95076 343 aa10.4□□□□□ -0.74
CHD3-206ENST00000452447 VSIG10L2P0DP72 767 aa10.4□□□□□ -0.74
CHD3-206ENST00000452447 LMO1P25800 156 aa10.4□□□□□ -0.74
CHD3-206ENST00000452447 HTR1DP28221 377 aa10.4□□□□□ -0.74
CHD3-206ENST00000452447 AESQ08117 197 aa10.4□□□□□ -0.74
CHD3-206ENST00000452447 PDLIM3Q53GG5 364 aaPredicted RBP10.4□□□□□ -0.74
CHD3-206ENST00000452447 LDLRAD2Q5SZI1 272 aa10.4□□□□□ -0.74
CHD3-206ENST00000452447 OR52W1Q6IF63 320 aa10.4□□□□□ -0.74
CHD3-206ENST00000452447 RNF144BQ7Z419 303 aa10.4□□□□□ -0.74
CHD3-206ENST00000452447 TMEM219Q86XT9 240 aa10.4□□□□□ -0.74
CHD3-206ENST00000452447 PARP16Q8N5Y8 322 aa10.4□□□□□ -0.74
CHD3-206ENST00000452447 OR52I1Q8NGK6 324 aa10.4□□□□□ -0.74
CHD3-206ENST00000452447 CPNE2Q96FN4 548 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms