RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 OR5D18Q8NGL1 313 aa10.08□□□□□ -0.8
CPSF4-208ENST00000452047 OR4C13Q8NGP0 309 aa10.08□□□□□ -0.8
CPSF4-208ENST00000452047 MALSU1Q96EH3 234 aa10.08□□□□□ -0.8
CPSF4-208ENST00000452047 Q96MT0 163 aa10.08□□□□□ -0.8
CPSF4-208ENST00000452047 COMMD4Q9H0A8 199 aa10.08□□□□□ -0.8
CPSF4-208ENST00000452047 ZCCHC4Q9H5U6 513 aa10.08□□□□□ -0.8
CPSF4-208ENST00000452047 TCF19Q9Y242 345 aa10.08□□□□□ -0.8
CPSF4-208ENST00000452047 KIAA2026Q5HYC2 2103 aa10.07□□□□□ -0.8
CPSF4-208ENST00000452047 TMEM212A6NML5 194 aa10.07□□□□□ -0.8
CPSF4-208ENST00000452047 SIRPB1O00241 398 aa10.07□□□□□ -0.8
CPSF4-208ENST00000452047 OR2H2O95918 312 aa10.07□□□□□ -0.8
CPSF4-208ENST00000452047 LIMS3P0CW19 117 aa10.07□□□□□ -0.8
CPSF4-208ENST00000452047 LIMS4P0CW20 117 aa10.07□□□□□ -0.8
CPSF4-208ENST00000452047 LMO1P25800 156 aa10.07□□□□□ -0.8
CPSF4-208ENST00000452047 P2RX3P56373 397 aa10.07□□□□□ -0.8
CPSF4-208ENST00000452047 ZP1P60852 638 aa10.07□□□□□ -0.8
CPSF4-208ENST00000452047 DEFA6Q01524 100 aa10.07□□□□□ -0.8
CPSF4-208ENST00000452047 MRPL28Q13084 256 aaKnown RBP10.07□□□□□ -0.8
CPSF4-208ENST00000452047 PLA1AQ53H76 456 aa10.07□□□□□ -0.8
CPSF4-208ENST00000452047 CCBE1Q6UXH8 406 aaPredicted RBP10.07□□□□□ -0.8
CPSF4-208ENST00000452047 SAXO1Q8IYX7 474 aa10.07□□□□□ -0.8
CPSF4-208ENST00000452047 PARP16Q8N5Y8 322 aa10.07□□□□□ -0.8
CPSF4-208ENST00000452047 MYCBPQ99417 103 aaPredicted RBP10.07□□□□□ -0.8
CPSF4-208ENST00000452047 PDCD1LG2Q9BQ51 273 aa10.07□□□□□ -0.8
CPSF4-208ENST00000452047 JAM3Q9BX67 310 aa10.07□□□□□ -0.8
CPSF4-208ENST00000452047 CDCA4Q9BXL8 241 aa10.07□□□□□ -0.8
CPSF4-208ENST00000452047 RHOFQ9HBH0 211 aa10.07□□□□□ -0.8
CPSF4-208ENST00000452047 EXOSC4Q9NPD3 245 aaKnown RBP10.07□□□□□ -0.8
CPSF4-208ENST00000452047 GLS2Q9UI32 602 aa10.07□□□□□ -0.8
CPSF4-208ENST00000452047 GSTK1Q9Y2Q3 226 aa10.07□□□□□ -0.8
CPSF4-208ENST00000452047 SESN1Q9Y6P5 492 aa10.07□□□□□ -0.8
CPSF4-208ENST00000452047 IGHV2-26A0A0B4J1V2 119 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 A6NDX4 124 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 SH2D1BO14796 132 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 SULT1B1O43704 296 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 WBP4O75554 376 aaKnown RBP10.06□□□□□ -0.8
CPSF4-208ENST00000452047 MMP23AO75900 390 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 RPSAP08865 295 aaKnown RBP10.06□□□□□ -0.8
CPSF4-208ENST00000452047 CCDC159P0C7I6 412 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 OCM2P0CE71 109 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 OCMP0CE72 109 aaPredicted RBP10.06□□□□□ -0.8
CPSF4-208ENST00000452047 RAB13P51153 203 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 DYNLT3P51808 116 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 KISS1Q15726 138 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 FAM189A2Q15884 450 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 SSX2Q16385 188 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 SMN1Q16637 294 aaKnown RBP10.06□□□□□ -0.8
CPSF4-208ENST00000452047 C2orf68Q2NKX9 166 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 MINOS1Q5TGZ0 78 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 ZNF529Q6P280 563 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 C11orf88Q6PI97 169 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 SERPINA12Q8IW75 414 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 OR5AK2Q8NH90 309 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 OR2T6Q8NHC8 308 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 RPS4Y2Q8TD47 263 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 CFHR4Q92496 578 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 RGP1Q92546 391 aaPredicted RBP10.06□□□□□ -0.8
CPSF4-208ENST00000452047 RDH12Q96NR8 316 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 NPFFR1Q9GZQ6 430 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 TMEM133Q9H2Q1 129 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 ZNF702PQ9H963 129 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 FGF20Q9NP95 211 aaPredicted RBP10.06□□□□□ -0.8
CPSF4-208ENST00000452047 UBE2J1Q9Y385 318 aaPredicted RBP10.06□□□□□ -0.8
CPSF4-208ENST00000452047 RPL36Q9Y3U8 105 aaKnown RBP10.06□□□□□ -0.8
CPSF4-208ENST00000452047 MINOS1-NBL1R4GNA1 71 aa10.06□□□□□ -0.8
CPSF4-208ENST00000452047 A0A0G2JK05 382 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 CSN2P05814 226 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 HCKP08631 526 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 JUNBP17275 347 aaPredicted RBP10.05□□□□□ -0.8
CPSF4-208ENST00000452047 GTF2A1P52655 376 aaPredicted RBP10.05□□□□□ -0.8
CPSF4-208ENST00000452047 DYNC1I2Q13409 638 aaKnown RBP10.05□□□□□ -0.8
CPSF4-208ENST00000452047 IL18R1Q13478 541 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 HERPUD1Q15011 391 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 CDK5R1Q15078 307 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 KLHL22Q53GT1 634 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 LPCAT4Q643R3 524 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 XAF1Q6GPH4 301 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 Q6P435 159 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 BAIAP2L2Q6UXY1 529 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 TRAPPC6BQ86SZ2 158 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 TMEM219Q86XT9 240 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 Q8N2B8 174 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 KLHDC1Q8N7A1 406 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 OR5D14Q8NGL3 314 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 OR4P4Q8NGL7 312 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 HAVCR2Q8TDQ0 301 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 CORO2AQ92828 525 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 COQ2Q96H96 371 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 CLEC7AQ9BXN2 247 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 NEK6Q9HC98 313 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 SERTAD4Q9NUC0 356 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 SMPD3Q9NY59 655 aaPredicted RBP10.05□□□□□ -0.8
CPSF4-208ENST00000452047 FOXJ3Q9UPW0 622 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 DHDHQ9UQ10 334 aa10.05□□□□□ -0.8
CPSF4-208ENST00000452047 H0YHG0 523 aa10.04□□□□□ -0.8
CPSF4-208ENST00000452047 SLC33A1O00400 549 aaPredicted RBP10.04□□□□□ -0.8
CPSF4-208ENST00000452047 ZNF44P15621 663 aa10.04□□□□□ -0.8
CPSF4-208ENST00000452047 GLIPR1P48060 266 aa10.04□□□□□ -0.8
CPSF4-208ENST00000452047 GBX2P52951 348 aaPredicted RBP10.04□□□□□ -0.8
CPSF4-208ENST00000452047 AESQ08117 197 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms