RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 RPUSD1Q9UJJ7 312 aaKnown RBP17.88■□□□□ 0.45
C9orf3-208ENST00000451893 AK6Q9Y3D8 172 aaKnown RBP17.88■□□□□ 0.45
C9orf3-208ENST00000451893 V9GYS6 101 aa17.88■□□□□ 0.45
C9orf3-208ENST00000451893 NBEAL1Q6ZS30 2694 aa17.88■□□□□ 0.45
C9orf3-208ENST00000451893 IGHV1-69DA0A0B4J2H0 117 aa17.87■□□□□ 0.45
C9orf3-208ENST00000451893 CENPVL3A0A0U1RRI6 287 aa17.87■□□□□ 0.45
C9orf3-208ENST00000451893 IFITM5A6NNB3 132 aa17.87■□□□□ 0.45
C9orf3-208ENST00000451893 POM121CA8CG34 1229 aa17.87■□□□□ 0.45
C9orf3-208ENST00000451893 CTDSP2O14595 271 aa17.87■□□□□ 0.45
C9orf3-208ENST00000451893 RGS5O15539 181 aa17.87■□□□□ 0.45
C9orf3-208ENST00000451893 DHRS3O75911 302 aa17.87■□□□□ 0.45
C9orf3-208ENST00000451893 ALX3O95076 343 aa17.87■□□□□ 0.45
C9orf3-208ENST00000451893 CST4P01036 141 aa17.87■□□□□ 0.45
C9orf3-208ENST00000451893 IGHV1-69P01742 117 aa17.87■□□□□ 0.45
C9orf3-208ENST00000451893 ZNF20P17024 532 aa17.87■□□□□ 0.45
C9orf3-208ENST00000451893 GPM6AP51674 278 aa17.87■□□□□ 0.45
C9orf3-208ENST00000451893 CAPZA1P52907 286 aa17.87■□□□□ 0.45
C9orf3-208ENST00000451893 CAV3P56539 151 aa17.87■□□□□ 0.45
C9orf3-208ENST00000451893 SPANXN2Q5MJ10 180 aa17.87■□□□□ 0.45
C9orf3-208ENST00000451893 GLT8D1Q68CQ7 371 aa17.87■□□□□ 0.45
C9orf3-208ENST00000451893 NR2C2APQ86WQ0 139 aa17.87■□□□□ 0.45
C9orf3-208ENST00000451893 NKAIN3Q8N8D7 197 aa17.87■□□□□ 0.45
C9orf3-208ENST00000451893 OR10Z1Q8NGY1 313 aa17.87■□□□□ 0.45
C9orf3-208ENST00000451893 OR14K1Q8NGZ2 314 aa17.87■□□□□ 0.45
C9orf3-208ENST00000451893 OR5P3Q8WZ94 311 aa17.87■□□□□ 0.45
C9orf3-208ENST00000451893 KPTNQ9Y664 436 aa17.87■□□□□ 0.45
C9orf3-208ENST00000451893 FAM181BA6NEQ2 426 aa17.86■□□□□ 0.45
C9orf3-208ENST00000451893 TNFRSF13BO14836 293 aaPredicted RBP17.86■□□□□ 0.45
C9orf3-208ENST00000451893 GPR37O15354 613 aa17.86■□□□□ 0.45
C9orf3-208ENST00000451893 AKR7A2O43488 359 aa17.86■□□□□ 0.45
C9orf3-208ENST00000451893 NDUFB7P17568 137 aa17.86■□□□□ 0.45
C9orf3-208ENST00000451893 GLRA1P23415 457 aa17.86■□□□□ 0.45
C9orf3-208ENST00000451893 ACKR3P25106 362 aa17.86■□□□□ 0.45
C9orf3-208ENST00000451893 GABRA2P47869 451 aa17.86■□□□□ 0.45
C9orf3-208ENST00000451893 ZNF529Q6P280 563 aa17.86■□□□□ 0.45
C9orf3-208ENST00000451893 Q6YL49 198 aa17.86■□□□□ 0.45
C9orf3-208ENST00000451893 C17orf107Q6ZR85 190 aa17.86■□□□□ 0.45
C9orf3-208ENST00000451893 VMO1Q7Z5L0 202 aa17.86■□□□□ 0.45
C9orf3-208ENST00000451893 CCDC190Q86UF4 302 aa17.86■□□□□ 0.45
C9orf3-208ENST00000451893 OR4F5Q8NH21 305 aa17.86■□□□□ 0.45
C9orf3-208ENST00000451893 SSMEM1Q8WWF3 244 aa17.86■□□□□ 0.45
C9orf3-208ENST00000451893 PP6455Q8WZ26 134 aa17.86■□□□□ 0.45
C9orf3-208ENST00000451893 BORCS5Q969J3 196 aa17.86■□□□□ 0.45
C9orf3-208ENST00000451893 SEH1LQ96EE3 360 aa17.86■□□□□ 0.45
C9orf3-208ENST00000451893 MED30Q96HR3 178 aa17.86■□□□□ 0.45
C9orf3-208ENST00000451893 SIRPDQ9H106 197 aa17.86■□□□□ 0.45
C9orf3-208ENST00000451893 TLNRD1Q9H1K6 362 aa17.86■□□□□ 0.45
C9orf3-208ENST00000451893 NEK6Q9HC98 313 aa17.86■□□□□ 0.45
C9orf3-208ENST00000451893 PALMDQ9NP74 551 aa17.86■□□□□ 0.45
C9orf3-208ENST00000451893 DAPK2Q9UIK4 370 aa17.86■□□□□ 0.45
C9orf3-208ENST00000451893 TRAV8-7A0A075B6U6 113 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 A0A1B0GW55 424 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 A0A1W2PQ09 198 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 BTBD17A6NE02 478 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 KNG1P01042 644 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 DUX4L2P0CJ85 424 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 DUX4L3P0CJ86 424 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 DUX4L4P0CJ87 422 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 DUX4L5P0CJ88 424 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 DUX4L6P0CJ89 424 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 DUX4L7P0CJ90 424 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 CALCBP10092 127 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 MMP9P14780 707 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 PTBP1P26599 531 aaKnown RBP eCLIP17.85■□□□□ 0.45
C9orf3-208ENST00000451893 CD40LGP29965 261 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 TNFSF8P32971 234 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 OR10A3P58181 314 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 GNG3P63215 75 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 RIPPLY1Q0D2K3 151 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 DCTN2Q13561 401 aaKnown RBP17.85■□□□□ 0.45
C9orf3-208ENST00000451893 ZBTB37Q5TC79 503 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 PLCXD3Q63HM9 321 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 DUX4L9Q6RFH8 374 aaPredicted RBP17.85■□□□□ 0.45
C9orf3-208ENST00000451893 METAP1DQ6UB28 335 aaPredicted RBP17.85■□□□□ 0.45
C9orf3-208ENST00000451893 MOB3CQ70IA8 216 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 UTS2BQ765I0 119 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 ZNF671Q8TAW3 534 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 LYZL4Q96KX0 146 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 DNTTIP1Q9H147 329 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 PLEKHA1Q9HB21 404 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 BEX1Q9HBH7 125 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 TMEM138Q9NPI0 162 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 DUX4Q9UBX2 424 aa17.85■□□□□ 0.45
C9orf3-208ENST00000451893 SLC25A10Q9UBX3 287 aaPredicted RBP17.85■□□□□ 0.45
C9orf3-208ENST00000451893 A0A1B0GUS0 222 aa17.84■□□□□ 0.45
C9orf3-208ENST00000451893 ZNF732B4DXR9 585 aa17.84■□□□□ 0.45
C9orf3-208ENST00000451893 MAS1P04201 325 aa17.84■□□□□ 0.45
C9orf3-208ENST00000451893 ALDOBP05062 364 aa17.84■□□□□ 0.45
C9orf3-208ENST00000451893 MELTFP08582 738 aa17.84■□□□□ 0.45
C9orf3-208ENST00000451893 RAB3AP20336 220 aa17.84■□□□□ 0.45
C9orf3-208ENST00000451893 MDKP21741 143 aaPredicted RBP17.84■□□□□ 0.45
C9orf3-208ENST00000451893 RAG2P55895 527 aa17.84■□□□□ 0.45
C9orf3-208ENST00000451893 GUCA2AQ02747 115 aa17.84■□□□□ 0.45
C9orf3-208ENST00000451893 STUMQ69YW2 141 aa17.84■□□□□ 0.45
C9orf3-208ENST00000451893 MFSD4AQ8N468 514 aa17.84■□□□□ 0.45
C9orf3-208ENST00000451893 TMEM86BQ8N661 226 aa17.84■□□□□ 0.45
C9orf3-208ENST00000451893 TAF15Q92804 592 aaKnown RBP eCLIP17.84■□□□□ 0.45
C9orf3-208ENST00000451893 WDR13Q9H1Z4 485 aa17.84■□□□□ 0.45
C9orf3-208ENST00000451893 SIRT7Q9NRC8 400 aa17.84■□□□□ 0.45
C9orf3-208ENST00000451893 TAS2R4Q9NYW5 299 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms