RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 ERVFRD-1P60508 538 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 C9orf135Q5VTT2 229 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 WDR25Q64LD2 544 aaPredicted RBP7.91□□□□□ -1.14
COPB1-202ENST00000439561 ZNF787Q6DD87 383 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 TMEM37Q8WXS4 190 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 FRZBQ92765 325 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 MARS2Q96GW9 593 aaKnown RBP7.91□□□□□ -1.14
COPB1-202ENST00000439561 KCNS2Q9ULS6 477 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 HDGFL3Q9Y3E1 203 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 A0A1W2PPQ1 181 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 ZNF705FA8MVS1 300 aaPredicted RBP7.9□□□□□ -1.14
COPB1-202ENST00000439561 SCGB1D1O95968 90 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 IGHV3-9P01782 118 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 HBE1P02100 147 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 ZNF705DP0CH99 300 aaPredicted RBP7.9□□□□□ -1.14
COPB1-202ENST00000439561 ZNF705BP0CI00 300 aaPredicted RBP7.9□□□□□ -1.14
COPB1-202ENST00000439561 RPS2P15880 293 aaKnown RBP7.9□□□□□ -1.14
COPB1-202ENST00000439561 STARD6P59095 220 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 IL22RA1Q8N6P7 574 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 CHST5Q9GZS9 411 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 PLEKHF2Q9H8W4 249 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 P4HTMQ9NXG6 502 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 WNT16Q9UBV4 365 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 RANBP2P49792 3224 aaKnown RBP7.9□□□□□ -1.14
COPB1-202ENST00000439561 RALGAPA1Q6GYQ0 2036 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 C3orf85A0A1B0GTC6 90 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 A0A1B0GX78 115 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 DUX1O43812 170 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 IGHV4-34P06331 123 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 THBS4P35443 961 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 ERVS71-1P61550 626 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 CNN3Q15417 329 aaKnown RBP7.9□□□□□ -1.14
COPB1-202ENST00000439561 PLXDC1Q8IUK5 500 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 PP6455Q8WZ26 134 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 NTNG2Q96CW9 530 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 MUCL1Q96DR8 90 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 RBMXL1Q96E39 390 aaKnown RBP7.9□□□□□ -1.14
COPB1-202ENST00000439561 WFIKKN1Q96NZ8 548 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 EGLN1Q9GZT9 426 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 HS3ST3B1Q9Y662 390 aa7.9□□□□□ -1.14
COPB1-202ENST00000439561 CLDN34H7C241 214 aa7.9□□□□□ -1.15
COPB1-202ENST00000439561 LYL1P12980 280 aa7.9□□□□□ -1.15
COPB1-202ENST00000439561 DRD1P21728 446 aa7.9□□□□□ -1.15
COPB1-202ENST00000439561 TMEM187Q14656 261 aa7.9□□□□□ -1.15
COPB1-202ENST00000439561 IZUMO4Q1ZYL8 232 aa7.9□□□□□ -1.15
COPB1-202ENST00000439561 ZNF66Q6ZN08 573 aa7.9□□□□□ -1.15
COPB1-202ENST00000439561 BEND4Q6ZU67 534 aa7.9□□□□□ -1.15
COPB1-202ENST00000439561 UBALD1Q8TB05 177 aa7.9□□□□□ -1.15
COPB1-202ENST00000439561 C14orf144Q96I85 54 aa7.9□□□□□ -1.15
COPB1-202ENST00000439561 TP53RKQ96S44 253 aa7.9□□□□□ -1.15
COPB1-202ENST00000439561 GINS3Q9BRX5 216 aa7.9□□□□□ -1.15
COPB1-202ENST00000439561 BCO1Q9HAY6 547 aa7.9□□□□□ -1.15
COPB1-202ENST00000439561 ESPL1Q14674 2120 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 IGSF23A1L1A6 192 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 TERTO14746 1132 aaKnown RBP7.89□□□□□ -1.15
COPB1-202ENST00000439561 TCAPO15273 167 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 CHST1O43916 411 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 PTBP3O95758 552 aaKnown RBP7.89□□□□□ -1.15
COPB1-202ENST00000439561 NR2C1P13056 603 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 CD38P28907 300 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 PKIAP61925 76 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 RPS16P62249 146 aaKnown RBP7.89□□□□□ -1.15
COPB1-202ENST00000439561 ELOBQ15370 118 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 SLC25A26Q70HW3 274 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 C5orf24Q7Z6I8 188 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 TMEM252Q8N6L7 170 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 OR5L2Q8NGL0 311 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 GNPNAT1Q96EK6 184 aaPredicted RBP7.89□□□□□ -1.15
COPB1-202ENST00000439561 ATG101Q9BSB4 218 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 OR51B6Q9H340 312 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 ZNF665Q9H7R5 613 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 DKKL1Q9UK85 242 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 TMED3Q9Y3Q3 217 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 ZNF814B7Z6K7 855 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 E9PLN8 166 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 SOX15O60248 233 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 NRASP01111 189 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 IGHMP01871 453 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 PGA3P0DJD8 388 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 FOSL2P15408 326 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 PAX6P26367 422 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 CASP6P55212 293 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 C21orf62-AS1Q17RA5 79 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 OR8G2PQ6IF36 304 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 TBC1D26Q86UD7 250 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 OSR2Q8N2R0 312 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 C1orf147Q96MC9 270 aaPredicted RBP7.89□□□□□ -1.15
COPB1-202ENST00000439561 OXGR1Q96P68 337 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 SMIM7Q9BQ49 75 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 RSG1Q9BU20 258 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 KIAA1456Q9P272 454 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 TUBD1Q9UJT1 453 aa7.89□□□□□ -1.15
COPB1-202ENST00000439561 PPP5D1E7EU14 171 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 BMP5P22003 454 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 MRPS21P82921 87 aaKnown RBP7.88□□□□□ -1.15
COPB1-202ENST00000439561 SHBQ15464 509 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 SNAI3Q3KNW1 292 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 TGIF2LXQ8IUE1 241 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 OR10AD1Q8NGE0 317 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 NOSIPQ9Y314 301 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms