RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 KCNMB2Q9Y691 235 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 TRAV6A0A075B6T7 132 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 TRDCB7Z8K6 153 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 SEMA7AO75326 666 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 PMP2P02689 132 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 PGA4P0DJD7 388 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 PGA5P0DJD9 388 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 ZNF708P17019 499 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 MAS1LP35410 378 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 SNRPEP62304 92 aaKnown RBP3.31□□□□□ -1.88
SHPRH-205ENST00000433355 HOXC5Q00444 222 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 ZNF718Q3SXZ3 478 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 HIKESHIQ53FT3 197 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 WDR38Q5JTN6 314 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 DOLPP1Q86YN1 238 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 TMEM123Q8N131 208 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 BVESQ8NE79 360 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 TMEM68Q96MH6 324 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 TMEM56Q96MV1 263 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 RBCK1Q9BYM8 510 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 RAB1BQ9H0U4 201 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 R3HDMLQ9H3Y0 253 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 CLEC1BQ9P126 229 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 NOSIPQ9Y314 301 aaKnown RBP3.31□□□□□ -1.88
SHPRH-205ENST00000433355 TMEM56-RWDD3S4R434 201 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 KMT2EQ8IZD2 1858 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 NBEAL1Q6ZS30 2694 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 MFSD2BA6NFX1 497 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 TBX6O95947 436 aaPredicted RBP3.31□□□□□ -1.88
SHPRH-205ENST00000433355 MRPL3P09001 348 aaKnown RBP3.31□□□□□ -1.88
SHPRH-205ENST00000433355 SNRPBP14678 240 aaKnown RBP3.31□□□□□ -1.88
SHPRH-205ENST00000433355 MUC1P15941 1255 aaPredicted RBP3.31□□□□□ -1.88
SHPRH-205ENST00000433355 BLVRBP30043 206 aaPredicted RBP3.31□□□□□ -1.88
SHPRH-205ENST00000433355 HRH1P35367 487 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 ARG2P78540 354 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 SLC25A47Q6Q0C1 308 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 UBE2FQ969M7 185 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 GALMQ96C23 342 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 PLA2G10O15496 165 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 ZNF14P17017 642 aaPredicted RBP3.31□□□□□ -1.88
SHPRH-205ENST00000433355 RBM11P57052 281 aaKnown RBP3.31□□□□□ -1.88
SHPRH-205ENST00000433355 SMAGPQ0VAQ4 97 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 FFAR4Q5NUL3 377 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 GGNBP1Q5YKI7 109 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 SLC36A1Q7Z2H8 476 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 OR4C3Q8NH37 302 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 MRGPRDQ8TDS7 321 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 C1QTNF5Q9BXJ0 243 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 FAM206AQ9NX38 181 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 SLCO1B1Q9Y6L6 691 aa3.31□□□□□ -1.88
SHPRH-205ENST00000433355 PPP1R17O96001 155 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 CLEC3BP05452 202 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 LIPCP11150 499 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 IL11P20809 199 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 IGFBP4P22692 258 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 ITGA3P26006 1051 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 NHLH1Q02575 133 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 MRPL14Q6P1L8 145 aaKnown RBP3.3□□□□□ -1.88
SHPRH-205ENST00000433355 IL22RA1Q8N6P7 574 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 PFN4Q8NHR9 129 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 CACNG8Q8WXS5 425 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 PDCD1LG2Q9BQ51 273 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 PCDH15Q96QU1 1955 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 FBXO24O75426 580 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 ZBTB25P24278 435 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 FOXF1Q12946 379 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 HERPUD1Q15011 391 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 PDLIM3Q53GG5 364 aaPredicted RBP3.3□□□□□ -1.88
SHPRH-205ENST00000433355 FAM180AQ6UWF9 173 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 ACBD4Q8NC06 268 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 OR52N4Q8NGI2 321 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 FOXB1Q99853 325 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 PROCRQ9UNN8 238 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 CHCHD2Q9Y6H1 151 aaPredicted RBP3.3□□□□□ -1.88
SHPRH-205ENST00000433355 PRR14LQ5THK1 2151 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 ZNF705EA8MWA4 302 aaPredicted RBP3.3□□□□□ -1.88
SHPRH-205ENST00000433355 LDLRAD4O15165 306 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 CT45A6P0DMU7 189 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 CT45A5P0DMU8 189 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 CT45A7P0DMV0 189 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 GDF1P27539 372 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 IL2RGP31785 369 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 LGALS7P47929 136 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 TESK1Q15569 626 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 CT45A1Q5HYN5 189 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 MRGPRGQ86SM5 289 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 GLRX5Q86SX6 157 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 YRDCQ86U90 279 aaKnown RBP3.3□□□□□ -1.88
SHPRH-205ENST00000433355 ANGPTL5Q86XS5 388 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 CT45A3Q8NHU0 189 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 WDR77Q9BQA1 342 aaPredicted RBP3.3□□□□□ -1.88
SHPRH-205ENST00000433355 TAF9BQ9HBM6 251 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 TRGV10A0A0A0MS01 117 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 OOEPA6NGQ2 149 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 AKR7A3O95154 331 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 MT-ND4P03905 459 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 NQO2P16083 231 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 MEF2BQ02080 365 aaPredicted RBP3.3□□□□□ -1.88
SHPRH-205ENST00000433355 PDZK1IP1Q13113 114 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 C1orf189Q5VU69 101 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms