RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 ZBTB25P24278 435 aa14.22□□□□□ -0.13
USHBP1-203ENST00000431146 IL13RA1P78552 427 aa14.22□□□□□ -0.13
USHBP1-203ENST00000431146 ELP2Q6IA86 826 aa14.22□□□□□ -0.13
USHBP1-203ENST00000431146 DOLPP1Q86YN1 238 aa14.22□□□□□ -0.13
USHBP1-203ENST00000431146 OR2A7Q96R45 310 aa14.22□□□□□ -0.13
USHBP1-203ENST00000431146 C5orf66Q9H5L9 145 aa14.22□□□□□ -0.13
USHBP1-203ENST00000431146 IGHV2OR16-5A0A0B4J2B6 119 aa14.21□□□□□ -0.13
USHBP1-203ENST00000431146 C9orf170A2RU37 121 aa14.21□□□□□ -0.13
USHBP1-203ENST00000431146 CCSO14618 274 aa14.21□□□□□ -0.13
USHBP1-203ENST00000431146 TSC22D2O75157 780 aa14.21□□□□□ -0.13
USHBP1-203ENST00000431146 IGLV1-44P01699 117 aa14.21□□□□□ -0.13
USHBP1-203ENST00000431146 FABP6P51161 128 aa14.21□□□□□ -0.13
USHBP1-203ENST00000431146 ZNF83P51522 516 aa14.21□□□□□ -0.13
USHBP1-203ENST00000431146 IKZF1Q13422 519 aa14.21□□□□□ -0.13
USHBP1-203ENST00000431146 LYG2Q86SG7 212 aa14.21□□□□□ -0.13
USHBP1-203ENST00000431146 LHFPL1Q86WI0 220 aa14.21□□□□□ -0.13
USHBP1-203ENST00000431146 TMEM17Q86X19 198 aa14.21□□□□□ -0.13
USHBP1-203ENST00000431146 SNRNP40Q96DI7 357 aaKnown RBP14.21□□□□□ -0.13
USHBP1-203ENST00000431146 RTL8AQ9BWD3 113 aa14.21□□□□□ -0.13
USHBP1-203ENST00000431146 GPR132Q9UNW8 380 aa14.21□□□□□ -0.13
USHBP1-203ENST00000431146 OSGIN2Q9Y236 505 aa14.21□□□□□ -0.13
USHBP1-203ENST00000431146 SHANK1Q9Y566 2161 aa14.21□□□□□ -0.13
USHBP1-203ENST00000431146 IQCF6A8MYZ5 107 aa14.21□□□□□ -0.13
USHBP1-203ENST00000431146 EEF1E1-BLOC1S5C9J1V9 151 aa14.21□□□□□ -0.13
USHBP1-203ENST00000431146 CD34P28906 385 aa14.21□□□□□ -0.13
USHBP1-203ENST00000431146 CEACAM8P31997 349 aaPredicted RBP14.21□□□□□ -0.13
USHBP1-203ENST00000431146 POLR2GP62487 172 aaKnown RBP eCLIP14.21□□□□□ -0.13
USHBP1-203ENST00000431146 SLC22A25Q6T423 547 aa14.21□□□□□ -0.13
USHBP1-203ENST00000431146 C5orf24Q7Z6I8 188 aa14.21□□□□□ -0.13
USHBP1-203ENST00000431146 ZNF2Q9BSG1 426 aaPredicted RBP14.21□□□□□ -0.13
USHBP1-203ENST00000431146 LIME1Q9H400 295 aa14.21□□□□□ -0.13
USHBP1-203ENST00000431146 ASF1BQ9NVP2 202 aa14.21□□□□□ -0.13
USHBP1-203ENST00000431146 ADGRG4Q8IZF6 3080 aa14.21□□□□□ -0.13
USHBP1-203ENST00000431146 CHD8Q9HCK8 2581 aa14.21□□□□□ -0.14
USHBP1-203ENST00000431146 SMG1Q96Q15 3661 aaKnown RBP14.21□□□□□ -0.14
USHBP1-203ENST00000431146 GLRA1P23415 457 aa14.2□□□□□ -0.14
USHBP1-203ENST00000431146 DTYMKP23919 212 aa14.2□□□□□ -0.14
USHBP1-203ENST00000431146 SSTR2P30874 369 aa14.2□□□□□ -0.14
USHBP1-203ENST00000431146 LY6G6FQ5SQ64 297 aa14.2□□□□□ -0.14
USHBP1-203ENST00000431146 GFRALQ6UXV0 394 aa14.2□□□□□ -0.14
USHBP1-203ENST00000431146 SCCPDHQ8NBX0 429 aa14.2□□□□□ -0.14
USHBP1-203ENST00000431146 TMEM230Q96A57 120 aa14.2□□□□□ -0.14
USHBP1-203ENST00000431146 RTBDNQ9BSG5 229 aaPredicted RBP14.2□□□□□ -0.14
USHBP1-203ENST00000431146 PRR13Q9NZ81 148 aa14.2□□□□□ -0.14
USHBP1-203ENST00000431146 OPN4Q9UHM6 478 aa14.2□□□□□ -0.14
USHBP1-203ENST00000431146 F5H5P2 479 aa14.2□□□□□ -0.14
USHBP1-203ENST00000431146 M0R1B8 84 aa14.2□□□□□ -0.14
USHBP1-203ENST00000431146 PRRG2O14669 202 aa14.2□□□□□ -0.14
USHBP1-203ENST00000431146 GRPP07492 148 aa14.2□□□□□ -0.14
USHBP1-203ENST00000431146 RBMXP38159 391 aaKnown RBP14.2□□□□□ -0.14
USHBP1-203ENST00000431146 TMPRSS3P57727 454 aa14.2□□□□□ -0.14
USHBP1-203ENST00000431146 RAP2BP61225 183 aa14.2□□□□□ -0.14
USHBP1-203ENST00000431146 FAM27E3Q08E93 113 aa14.2□□□□□ -0.14
USHBP1-203ENST00000431146 IL24Q13007 206 aa14.2□□□□□ -0.14
USHBP1-203ENST00000431146 OR8G1Q15617 311 aa14.2□□□□□ -0.14
USHBP1-203ENST00000431146 SFXN3Q9BWM7 321 aa14.2□□□□□ -0.14
USHBP1-203ENST00000431146 CHMP1AQ9HD42 196 aaPredicted RBP14.2□□□□□ -0.14
USHBP1-203ENST00000431146 OBP2BQ9NPH6 170 aa14.2□□□□□ -0.14
USHBP1-203ENST00000431146 AMDHD2Q9Y303 409 aa14.2□□□□□ -0.14
USHBP1-203ENST00000431146 NBEAQ8NFP9 2946 aa14.19□□□□□ -0.14
USHBP1-203ENST00000431146 RELNP78509 3460 aa14.19□□□□□ -0.14
USHBP1-203ENST00000431146 J3QT63 122 aa14.19□□□□□ -0.14
USHBP1-203ENST00000431146 CDIPTO14735 213 aa14.19□□□□□ -0.14
USHBP1-203ENST00000431146 HS3ST1O14792 307 aa14.19□□□□□ -0.14
USHBP1-203ENST00000431146 MLNRO43193 412 aa14.19□□□□□ -0.14
USHBP1-203ENST00000431146 NOS1APO75052 506 aaPredicted RBP14.19□□□□□ -0.14
USHBP1-203ENST00000431146 OR5H8P0DN80 308 aa14.19□□□□□ -0.14
USHBP1-203ENST00000431146 FPR2P25090 351 aa14.19□□□□□ -0.14
USHBP1-203ENST00000431146 HOXA4Q00056 320 aaPredicted RBP14.19□□□□□ -0.14
USHBP1-203ENST00000431146 ZNF154Q13106 437 aa14.19□□□□□ -0.14
USHBP1-203ENST00000431146 EIF2S3LQ2VIR3 472 aaKnown RBP14.19□□□□□ -0.14
USHBP1-203ENST00000431146 LGALSLQ3ZCW2 172 aaPredicted RBP14.19□□□□□ -0.14
USHBP1-203ENST00000431146 C22orf34Q6ZV56 151 aa14.19□□□□□ -0.14
USHBP1-203ENST00000431146 KCTD9Q7L273 389 aa14.19□□□□□ -0.14
USHBP1-203ENST00000431146 FAM58AQ8N1B3 248 aa14.19□□□□□ -0.14
USHBP1-203ENST00000431146 NEK7Q8TDX7 302 aa14.19□□□□□ -0.14
USHBP1-203ENST00000431146 PURGQ9UJV8 347 aaKnown RBP14.19□□□□□ -0.14
USHBP1-203ENST00000431146 EDARQ9UNE0 448 aa14.19□□□□□ -0.14
USHBP1-203ENST00000431146 A0A0G2JNJ9 132 aa14.18□□□□□ -0.14
USHBP1-203ENST00000431146 ATP6V1G2-DDX39BF2Z307 99 aa14.18□□□□□ -0.14
USHBP1-203ENST00000431146 ERVH48-1M5A8F1 160 aa14.18□□□□□ -0.14
USHBP1-203ENST00000431146 NHLRC3Q5JS37 347 aa14.18□□□□□ -0.14
USHBP1-203ENST00000431146 PEG10Q86TG7 708 aaKnown RBP14.18□□□□□ -0.14
USHBP1-203ENST00000431146 PKIBQ9C010 78 aa14.18□□□□□ -0.14
USHBP1-203ENST00000431146 WDR13Q9H1Z4 485 aa14.18□□□□□ -0.14
USHBP1-203ENST00000431146 NARFLQ9H6Q4 476 aa14.18□□□□□ -0.14
USHBP1-203ENST00000431146 MSL2Q9HCI7 577 aa14.18□□□□□ -0.14
USHBP1-203ENST00000431146 Q9UFV3 132 aa14.18□□□□□ -0.14
USHBP1-203ENST00000431146 SPTA1P02549 2419 aa14.18□□□□□ -0.14
USHBP1-203ENST00000431146 ICE1Q9Y2F5 2266 aa14.18□□□□□ -0.14
USHBP1-203ENST00000431146 CEACAM18A8MTB9 384 aa14.18□□□□□ -0.14
USHBP1-203ENST00000431146 TIMM8AO60220 97 aaPredicted RBP14.18□□□□□ -0.14
USHBP1-203ENST00000431146 PGAM2P15259 253 aa14.18□□□□□ -0.14
USHBP1-203ENST00000431146 NAAAQ02083 359 aa14.18□□□□□ -0.14
USHBP1-203ENST00000431146 SLC9A3R2Q15599 337 aa14.18□□□□□ -0.14
USHBP1-203ENST00000431146 TMEM128Q5BJH2 165 aa14.18□□□□□ -0.14
USHBP1-203ENST00000431146 RDH5Q92781 318 aa14.18□□□□□ -0.14
USHBP1-203ENST00000431146 SPOCK3Q9BQ16 436 aa14.18□□□□□ -0.14
USHBP1-203ENST00000431146 NECAP2Q9NVZ3 263 aa14.18□□□□□ -0.14
USHBP1-203ENST00000431146 LRP5LA4QPB2 252 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms