RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 NPFFO15130 113 aa10.4□□□□□ -0.74
GPC1-204ENST00000426280 MRPS14O60783 128 aaKnown RBP10.4□□□□□ -0.74
GPC1-204ENST00000426280 TK1P04183 234 aa10.4□□□□□ -0.74
GPC1-204ENST00000426280 CD2P06729 351 aa10.4□□□□□ -0.74
GPC1-204ENST00000426280 SNU13P55769 128 aaKnown RBP10.4□□□□□ -0.74
GPC1-204ENST00000426280 KRTAP10-3P60369 221 aa10.4□□□□□ -0.74
GPC1-204ENST00000426280 SSX1Q16384 188 aa10.4□□□□□ -0.74
GPC1-204ENST00000426280 TAF9Q16594 264 aa10.4□□□□□ -0.74
GPC1-204ENST00000426280 SMIM21Q3B7S5 101 aa10.4□□□□□ -0.74
GPC1-204ENST00000426280 FAM27D1Q5T7N8 215 aa10.4□□□□□ -0.74
GPC1-204ENST00000426280 METAP1DQ6UB28 335 aaPredicted RBP10.4□□□□□ -0.74
GPC1-204ENST00000426280 SVOPQ8N4V2 548 aa10.4□□□□□ -0.74
GPC1-204ENST00000426280 ZNF561Q8N587 486 aa10.4□□□□□ -0.74
GPC1-204ENST00000426280 TPRX1Q8N7U7 411 aa10.4□□□□□ -0.74
GPC1-204ENST00000426280 OR5D18Q8NGL1 313 aa10.4□□□□□ -0.74
GPC1-204ENST00000426280 SLC25A28Q96A46 364 aa10.4□□□□□ -0.74
GPC1-204ENST00000426280 CEP19Q96LK0 163 aa10.4□□□□□ -0.74
GPC1-204ENST00000426280 DERL3Q96Q80 235 aa10.4□□□□□ -0.74
GPC1-204ENST00000426280 ISYNA1Q9NPH2 558 aa10.4□□□□□ -0.74
GPC1-204ENST00000426280 NOX4Q9NPH5 578 aa10.4□□□□□ -0.74
GPC1-204ENST00000426280 C1RLQ9NZP8 487 aa10.4□□□□□ -0.74
GPC1-204ENST00000426280 POLDIP2Q9Y2S7 368 aa10.4□□□□□ -0.74
GPC1-204ENST00000426280 SF3B6Q9Y3B4 125 aaKnown RBP10.4□□□□□ -0.74
GPC1-204ENST00000426280 TRBV5-7A0A0A0MS05 114 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 MAGEA13PA6NCF6 341 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 K7N7A8 449 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 M0R1W7 72 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 SULT1B1O43704 296 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 PSPNO60542 156 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 KNG1P01042 644 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 HCKP08631 526 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 OCMP0CE72 109 aaPredicted RBP10.39□□□□□ -0.75
GPC1-204ENST00000426280 CPEP16870 476 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 IGFBP3P17936 291 aaPredicted RBP10.39□□□□□ -0.75
GPC1-204ENST00000426280 PRKACBP22694 351 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 POU3F4P49335 361 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 RBP2P50120 134 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 ATP1B3P54709 279 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 GP2P55259 537 aaKnown RBP10.39□□□□□ -0.75
GPC1-204ENST00000426280 MTCP1P56278 107 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 ACSM3Q53FZ2 586 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 LDLRAD2Q5SZI1 272 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 ZNF529Q6P280 563 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 UNQ9370/PRO34162Q6UXP9 181 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 C17orf107Q6ZR85 190 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 C1orf122Q6ZSJ8 110 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 DNAAF1Q8NEP3 725 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 OR5D14Q8NGL3 314 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 SPSB1Q96BD6 273 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 DMRTB1Q96MA1 342 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 ZNF747Q9BV97 191 aa10.39□□□□□ -0.75
GPC1-204ENST00000426280 UNKLQ9H9P5 680 aaKnown RBP10.39□□□□□ -0.75
GPC1-204ENST00000426280 RAB3AP20336 220 aa10.38□□□□□ -0.75
GPC1-204ENST00000426280 PSMB9P28065 219 aa10.38□□□□□ -0.75
GPC1-204ENST00000426280 SAA4P35542 130 aa10.38□□□□□ -0.75
GPC1-204ENST00000426280 TGFBR2P37173 567 aa10.38□□□□□ -0.75
GPC1-204ENST00000426280 RPL31P62899 125 aaKnown RBP10.38□□□□□ -0.75
GPC1-204ENST00000426280 FOXL1Q12952 345 aa10.38□□□□□ -0.75
GPC1-204ENST00000426280 PDZK1IP1Q13113 114 aa10.38□□□□□ -0.75
GPC1-204ENST00000426280 GPR50Q13585 617 aa10.38□□□□□ -0.75
GPC1-204ENST00000426280 NEDD8Q15843 81 aa10.38□□□□□ -0.75
GPC1-204ENST00000426280 UBE2UQ5VVX9 321 aa10.38□□□□□ -0.75
GPC1-204ENST00000426280 TMEM91Q6ZNR0 172 aa10.38□□□□□ -0.75
GPC1-204ENST00000426280 LHFPL2Q6ZUX7 228 aa10.38□□□□□ -0.75
GPC1-204ENST00000426280 SATL1Q86VE3 508 aa10.38□□□□□ -0.75
GPC1-204ENST00000426280 LDLRAD3Q86YD5 345 aa10.38□□□□□ -0.75
GPC1-204ENST00000426280 CMTM4Q8IZR5 234 aa10.38□□□□□ -0.75
GPC1-204ENST00000426280 DYNAPQ8N1N2 210 aa10.38□□□□□ -0.75
GPC1-204ENST00000426280 OR4S1Q8NGB4 309 aa10.38□□□□□ -0.75
GPC1-204ENST00000426280 EMG1Q92979 244 aaKnown RBP10.38□□□□□ -0.75
GPC1-204ENST00000426280 CHST6Q9GZX3 395 aa10.38□□□□□ -0.75
GPC1-204ENST00000426280 PPIL3Q9H2H8 161 aaKnown RBP10.38□□□□□ -0.75
GPC1-204ENST00000426280 TRBV23-1A0A0A0MS06 115 aa10.37□□□□□ -0.75
GPC1-204ENST00000426280 MEIOCA2RUB1 952 aa10.37□□□□□ -0.75
GPC1-204ENST00000426280 GPR137BO60478 399 aa10.37□□□□□ -0.75
GPC1-204ENST00000426280 ALX3O95076 343 aa10.37□□□□□ -0.75
GPC1-204ENST00000426280 TNFAIP8O95379 198 aa10.37□□□□□ -0.75
GPC1-204ENST00000426280 MAS1P04201 325 aa10.37□□□□□ -0.75
GPC1-204ENST00000426280 CHRM2P08172 466 aa10.37□□□□□ -0.75
GPC1-204ENST00000426280 BMXP51813 675 aa10.37□□□□□ -0.75
GPC1-204ENST00000426280 UBE2E1P51965 193 aa10.37□□□□□ -0.75
GPC1-204ENST00000426280 FABP5Q01469 135 aa10.37□□□□□ -0.75
GPC1-204ENST00000426280 KISS1Q15726 138 aa10.37□□□□□ -0.75
GPC1-204ENST00000426280 BAIAP2L2Q6UXY1 529 aa10.37□□□□□ -0.75
GPC1-204ENST00000426280 ZNF782Q6ZMW2 699 aaPredicted RBP10.37□□□□□ -0.75
GPC1-204ENST00000426280 CEACAM19Q7Z692 300 aa10.37□□□□□ -0.75
GPC1-204ENST00000426280 LHFPL4Q7Z7J7 247 aa10.37□□□□□ -0.75
GPC1-204ENST00000426280 FAM58AQ8N1B3 248 aa10.37□□□□□ -0.75
GPC1-204ENST00000426280 MS4A15Q8N5U1 240 aa10.37□□□□□ -0.75
GPC1-204ENST00000426280 ASCC1Q8N9N2 400 aaKnown RBP10.37□□□□□ -0.75
GPC1-204ENST00000426280 TSPAN14Q8NG11 270 aa10.37□□□□□ -0.75
GPC1-204ENST00000426280 METTL8Q9H825 291 aaKnown RBP10.37□□□□□ -0.75
GPC1-204ENST00000426280 ZMAT3Q9HA38 289 aaKnown RBP10.37□□□□□ -0.75
GPC1-204ENST00000426280 ZNRD1Q9P1U0 126 aa10.37□□□□□ -0.75
GPC1-204ENST00000426280 C17orf98A8MV24 154 aa10.36□□□□□ -0.75
GPC1-204ENST00000426280 GABRPO00591 440 aa10.36□□□□□ -0.75
GPC1-204ENST00000426280 GPX5O75715 221 aa10.36□□□□□ -0.75
GPC1-204ENST00000426280 SC5DO75845 299 aa10.36□□□□□ -0.75
GPC1-204ENST00000426280 MMP23AO75900 390 aa10.36□□□□□ -0.75
GPC1-204ENST00000426280 HAND1O96004 215 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms