RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 TERTO14746 1132 aaKnown RBP11.62□□□□□ -0.55
USP42-203ENST00000426246 MBPP02686 304 aaPredicted RBP11.62□□□□□ -0.55
USP42-203ENST00000426246 CD37P11049 281 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 SLC25A4P12235 298 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 NDUFA6P56556 154 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 CLDN15P56746 228 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 PLGLB1Q02325 96 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 ZNF92Q03936 586 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 HSPB2A8KAH6 182 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 MFNGO00587 321 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 HKR1P10072 659 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 AADACP22760 399 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 ELLP55199 621 aaPredicted RBP11.62□□□□□ -0.55
USP42-203ENST00000426246 MRPS34P82930 218 aaKnown RBP11.62□□□□□ -0.55
USP42-203ENST00000426246 HSPB2Q16082 182 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 SPINK9Q5DT21 86 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 CXorf66Q5JRM2 361 aaPredicted RBP11.62□□□□□ -0.55
USP42-203ENST00000426246 NECAP1Q8NC96 275 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 HIST1H2AAQ96QV6 131 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 LIME1Q9H400 295 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 RAB18Q9NP72 206 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 MMP26Q9NRE1 261 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 SLC2A9Q9NRM0 540 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 MED9Q9NWA0 146 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 PCSK5Q92824 1860 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 NKX2-6A6NCS4 301 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 TTLL8A6PVC2 850 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 SOHLH1Q5JUK2 328 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 AGBL5Q8NDL9 886 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 OR6X1Q8NH79 312 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 RNF138Q8WVD3 245 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 MRPL13Q9BYD1 178 aaKnown RBP11.61□□□□□ -0.55
USP42-203ENST00000426246 FAM234AQ9H0X4 552 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 BARX1Q9HBU1 254 aaPredicted RBP11.61□□□□□ -0.55
USP42-203ENST00000426246 CYTL1Q9NRR1 136 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 FAM212BQ9NTI7 297 aaPredicted RBP11.61□□□□□ -0.55
USP42-203ENST00000426246 PPP1R3CQ9UQK1 317 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 SRSF10O75494 262 aaKnown RBP11.61□□□□□ -0.55
USP42-203ENST00000426246 KLF7O75840 302 aaPredicted RBP11.61□□□□□ -0.55
USP42-203ENST00000426246 FOXG1P55316 489 aaPredicted RBP11.61□□□□□ -0.55
USP42-203ENST00000426246 EIF2S3LQ2VIR3 472 aaKnown RBP11.61□□□□□ -0.55
USP42-203ENST00000426246 SHEQ5VZ18 495 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 OPN5Q6U736 354 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 C5orf46Q6UWT4 87 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 MCEMP1Q8IX19 187 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 SUMF2Q8NBJ7 301 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 OR56B2PQ8NGI1 322 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 OR1K1Q8NGR3 316 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 EDEM2Q9BV94 578 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 WDR54Q9H977 334 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 NECAP2Q9NVZ3 263 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 C7orf77A4D0Y5 90 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 WDR1O75083 606 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 UMODP07911 640 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 TMEM267Q0VDI3 215 aaPredicted RBP11.61□□□□□ -0.55
USP42-203ENST00000426246 ZNF345Q14585 488 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 MRPL21Q7Z2W9 205 aaKnown RBP11.61□□□□□ -0.55
USP42-203ENST00000426246 CALHM1Q8IU99 346 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 USB1Q9BQ65 265 aaKnown RBP11.61□□□□□ -0.55
USP42-203ENST00000426246 PLCE1Q9P212 2302 aa11.61□□□□□ -0.55
USP42-203ENST00000426246 SPENQ96T58 3664 aaKnown RBP11.6□□□□□ -0.55
USP42-203ENST00000426246 LINC01387J3KSC0 135 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 MRPL33O75394 65 aaKnown RBP11.6□□□□□ -0.55
USP42-203ENST00000426246 PABPC1L2AQ5JQF8 200 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 ZNF343Q6P1L6 599 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 SLC25A47Q6Q0C1 308 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 SLC35G3Q8N808 338 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 OR10AD1Q8NGE0 317 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 GLYATL2Q8WU03 294 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 ZNF286AQ9HBT8 521 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 CFAP47Q6ZTR5 3102 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 A0A1W2PPE3 182 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 ST8SIA3O43173 380 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 MLF1P58340 268 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 QRFPP83859 136 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 NMES1Q9C002 83 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 LUZP4Q9P127 313 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 LOC102723996A0A087X1L8 192 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 ZNF724A8MTY0 619 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 ADAM20O43506 726 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 DKK1O94907 266 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 YIF1AO95070 293 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 SCTP09683 121 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 FOLR3P41439 243 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 MECP2P51608 486 aaKnown RBP11.6□□□□□ -0.55
USP42-203ENST00000426246 HGFACQ04756 655 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 TESK1Q15569 626 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 OR8G2PQ6IF36 304 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 OSR2Q8N2R0 312 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 RHBDD1Q8TEB9 315 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 RBMXL1Q96E39 390 aaKnown RBP11.6□□□□□ -0.55
USP42-203ENST00000426246 HS3ST6Q96QI5 342 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 LIPGQ9Y5X9 500 aa11.6□□□□□ -0.55
USP42-203ENST00000426246 AQP7P3A6NL99 342 aa11.59□□□□□ -0.55
USP42-203ENST00000426246 CYC1P08574 325 aa11.59□□□□□ -0.55
USP42-203ENST00000426246 OR5C1Q8NGR4 320 aa11.59□□□□□ -0.55
USP42-203ENST00000426246 OR10D3Q8NH80 312 aa11.59□□□□□ -0.55
USP42-203ENST00000426246 FOXB1Q99853 325 aa11.59□□□□□ -0.55
USP42-203ENST00000426246 GNG13Q9P2W3 67 aa11.59□□□□□ -0.55
USP42-203ENST00000426246 NOSIPQ9Y314 301 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms