RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 SNX22Q96L94 193 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 DCTN5Q9BTE1 182 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 CENPOQ9BU64 300 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 SHARPINQ9H0F6 387 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 PLGRKTQ9HBL7 147 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 TMEM160Q9NX00 188 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 RPUSD1Q9UJJ7 312 aaKnown RBP20.25■□□□□ 0.83
VEGFA-209ENST00000425836 ST3GAL6Q9Y274 331 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 SIRPB1O00241 398 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 SLC17A2O00624 439 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 PSPNO60542 156 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 TFAP2AP05549 437 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 LMO1P25800 156 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 RBM11P57052 281 aaKnown RBP20.25■□□□□ 0.83
VEGFA-209ENST00000425836 OR10A3P58181 314 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 SCN1BQ07699 218 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 TIMM50Q3ZCQ8 353 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 GDPGP1Q6ZNW5 385 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 TMEM104Q8NE00 496 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 H1FXQ92522 213 aaKnown RBP20.25■□□□□ 0.83
VEGFA-209ENST00000425836 KCTD7Q96MP8 289 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 TMPRSS13Q9BYE2 586 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.24■□□□□ 0.832e-8■■■□□ 14.7
VEGFA-209ENST00000425836 DEGS1O15121 323 aa20.24■□□□□ 0.83
VEGFA-209ENST00000425836 ENSAO43768 121 aaKnown RBP20.24■□□□□ 0.83
VEGFA-209ENST00000425836 UBBP0CG47 229 aa20.24■□□□□ 0.83
VEGFA-209ENST00000425836 ZNF44P15621 663 aa20.24■□□□□ 0.83
VEGFA-209ENST00000425836 RAB3BP20337 219 aa20.24■□□□□ 0.83
VEGFA-209ENST00000425836 PAX8Q06710 450 aa20.24■□□□□ 0.83
VEGFA-209ENST00000425836 BTNL3Q6UXE8 466 aa20.24■□□□□ 0.83
VEGFA-209ENST00000425836 LY6G5BQ8NDX9 201 aa20.24■□□□□ 0.83
VEGFA-209ENST00000425836 BANF2Q9H503 90 aa20.24■□□□□ 0.83
VEGFA-209ENST00000425836 TLN2Q9Y4G6 2542 aa20.23■□□□□ 0.83
VEGFA-209ENST00000425836 A0A0G2JK05 382 aa20.23■□□□□ 0.83
VEGFA-209ENST00000425836 J3QLI3 93 aa20.23■□□□□ 0.83
VEGFA-209ENST00000425836 AIREO43918 545 aa20.23■□□□□ 0.83
VEGFA-209ENST00000425836 GABRR1P24046 479 aa20.23■□□□□ 0.83
VEGFA-209ENST00000425836 ALDH3B2P48448 385 aa20.23■□□□□ 0.83
VEGFA-209ENST00000425836 P2RY14Q15391 338 aa20.23■□□□□ 0.83
VEGFA-209ENST00000425836 RAB11BQ15907 218 aa20.23■□□□□ 0.83
VEGFA-209ENST00000425836 NR2C2APQ86WQ0 139 aa20.23■□□□□ 0.83
VEGFA-209ENST00000425836 CHST4Q8NCG5 386 aa20.23■□□□□ 0.83
VEGFA-209ENST00000425836 C8orf46Q8TAG6 207 aa20.23■□□□□ 0.83
VEGFA-209ENST00000425836 MRPS24Q96EL2 167 aaKnown RBP20.23■□□□□ 0.83
VEGFA-209ENST00000425836 FUNDC2Q9BWH2 189 aa20.23■□□□□ 0.83
VEGFA-209ENST00000425836 CHST6Q9GZX3 395 aa20.23■□□□□ 0.83
VEGFA-209ENST00000425836 C7orf69Q9H7B7 122 aa20.23■□□□□ 0.83
VEGFA-209ENST00000425836 TEP1Q99973 2627 aaKnown RBP20.22■□□□□ 0.83
VEGFA-209ENST00000425836 SLC33A1O00400 549 aaPredicted RBP20.22■□□□□ 0.83
VEGFA-209ENST00000425836 GEMIN2O14893 280 aaKnown RBP20.22■□□□□ 0.83
VEGFA-209ENST00000425836 CRTAPO75718 401 aaPredicted RBP20.22■□□□□ 0.83
VEGFA-209ENST00000425836 AVPP01185 164 aa20.22■□□□□ 0.83
VEGFA-209ENST00000425836 VSIG8P0DPA2 414 aa20.22■□□□□ 0.83
VEGFA-209ENST00000425836 FAM120AOSQ5T036 256 aa20.22■□□□□ 0.83
VEGFA-209ENST00000425836 TPRA1Q86W33 373 aa20.22■□□□□ 0.83
VEGFA-209ENST00000425836 OR8H2Q8N162 312 aa20.22■□□□□ 0.83
VEGFA-209ENST00000425836 OR4S1Q8NGB4 309 aa20.22■□□□□ 0.83
VEGFA-209ENST00000425836 OR5D13Q8NGL4 314 aa20.22■□□□□ 0.83
VEGFA-209ENST00000425836 ZNF581Q9P0T4 197 aa20.22■□□□□ 0.83
VEGFA-209ENST00000425836 OPN4Q9UHM6 478 aa20.22■□□□□ 0.83
VEGFA-209ENST00000425836 ARHGAP32A7KAX9 2087 aa20.22■□□□□ 0.83
VEGFA-209ENST00000425836 LIPFP07098 398 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 PPIAL4GP0DN37 164 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 MGMTP16455 207 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 SDC2P34741 201 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 OR3A1P47881 315 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 QRFPP83859 136 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 HES5Q5TA89 166 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 OR10K2Q6IF99 312 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 C1orf229Q6ZS94 237 aaPredicted RBP20.21■□□□□ 0.83
VEGFA-209ENST00000425836 FAM46BQ96A09 425 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 CST11Q9H112 138 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 KCNK15Q9H427 330 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 TRAV24A0A0B4J272 114 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 SMIM30A4D0T7 59 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 IFITM5A6NNB3 132 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 BPNT1O95861 308 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 CLDN12P56749 244 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 GRK1Q15835 563 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 TAF9Q16594 264 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 METAP1DQ6UB28 335 aaPredicted RBP20.21■□□□□ 0.83
VEGFA-209ENST00000425836 LINC00596Q86U02 117 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 OR4M1Q8NGD0 313 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 PPP1R35Q8TAP8 253 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 SELENOIQ9C0D9 397 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 C19orf12Q9NSK7 152 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 AUP1Q9Y679 476 aa20.21■□□□□ 0.83
VEGFA-209ENST00000425836 HIVEP2P31629 2446 aa20.2■□□□□ 0.82
VEGFA-209ENST00000425836 TRBV23-1A0A0A0MS06 115 aa20.2■□□□□ 0.82
VEGFA-209ENST00000425836 OR7C1O76099 320 aaPredicted RBP20.2■□□□□ 0.82
VEGFA-209ENST00000425836 ARSBP15848 533 aa20.2■□□□□ 0.82
VEGFA-209ENST00000425836 CFPP27918 469 aa20.2■□□□□ 0.82
VEGFA-209ENST00000425836 LSM3P62310 102 aaKnown RBP20.2■□□□□ 0.82
VEGFA-209ENST00000425836 GDPD3Q7L5L3 318 aa20.2■□□□□ 0.82
VEGFA-209ENST00000425836 MRI1Q9BV20 369 aa20.2■□□□□ 0.82
VEGFA-209ENST00000425836 IFT22Q9H7X7 185 aa20.2■□□□□ 0.82
VEGFA-209ENST00000425836 STEAP1Q9UHE8 339 aa20.2■□□□□ 0.82
VEGFA-209ENST00000425836 TMEM14DPA8MWL7 114 aa20.19■□□□□ 0.82
VEGFA-209ENST00000425836 MGST3O14880 152 aa20.19■□□□□ 0.82
VEGFA-209ENST00000425836 MPIG6BO95866 241 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms