RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, human

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL12A1-205	ENST00000425443	FXYD4	P59646	89 aa		11.31	□□□□□ -0.6
COL12A1-205	ENST00000425443	SP6	Q3SY56	376 aa		11.31	□□□□□ -0.6
COL12A1-205	ENST00000425443	C10orf128	Q5T292	105 aa		11.31	□□□□□ -0.6
COL12A1-205	ENST00000425443	GPR137C	Q8N3F9	429 aa		11.31	□□□□□ -0.6
COL12A1-205	ENST00000425443	TMEM54	Q969K7	222 aa		11.31	□□□□□ -0.6
COL12A1-205	ENST00000425443	CNTNAP3B	Q96NU0	1288 aa		11.31	□□□□□ -0.6
COL12A1-205	ENST00000425443	OCSTAMP	Q9BR26	566 aa		11.31	□□□□□ -0.6
COL12A1-205	ENST00000425443	TMEM208	Q9BTX3	173 aa		11.31	□□□□□ -0.6
COL12A1-205	ENST00000425443	SRXN1	Q9BYN0	137 aa		11.31	□□□□□ -0.6
COL12A1-205	ENST00000425443	TMPRSS5	Q9H3S3	457 aa		11.31	□□□□□ -0.6
COL12A1-205	ENST00000425443	PRDM13	Q9H4Q3	707 aa		11.31	□□□□□ -0.6
COL12A1-205	ENST00000425443	MMP26	Q9NRE1	261 aa		11.31	□□□□□ -0.6
COL12A1-205	ENST00000425443	PLEKHJ1	Q9NW61	149 aa		11.31	□□□□□ -0.6
COL12A1-205	ENST00000425443	FOXI3	A8MTJ6	420 aa	Predicted RBP	11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	TSTD3	H0UI37	97 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	IGHV3-9	P01782	118 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	LCAT	P04180	440 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	NME2	P22392	152 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	PTGER4	P35408	488 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	THBS4	P35443	961 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	NAAA	Q02083	359 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	ACTBL2	Q562R1	376 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	C1orf210	Q8IVY1	113 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	ADAMTS17	Q8TE56	1095 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	THOC3	Q96J01	351 aa	Known RBP	11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	ALKBH3	Q96Q83	286 aa	Predicted RBP	11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	C20orf24	Q9BUV8	137 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	RHOF	Q9HBH0	211 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	RAB18	Q9NP72	206 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	KCNIP3	Q9Y2W7	256 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443		A6NNC1	897 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	CXCL13	O43927	109 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	CSTB	P04080	98 aa	Known RBP	11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	CCL1	P22362	96 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	MTCP1	P56278	107 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	PJVK	Q0ZLH3	352 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	SNAI3	Q3KNW1	292 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	AAED1	Q7RTV5	226 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	DMBX1	Q8NFW5	382 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	RNASE8	Q8TDE3	154 aa	Known RBP	11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	NEK7	Q8TDX7	302 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	PP6455	Q8WZ26	134 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	NRIP2	Q9BQI9	281 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	NUDT16L1	Q9BRJ7	211 aa	Known RBP	11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	LIME1	Q9H400	295 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	LSM5	Q9Y4Y9	91 aa	Known RBP	11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	DNAJC13	O75165	2243 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443	ZNF407	Q9C0G0	2248 aa		11.3	□□□□□ -0.6
COL12A1-205	ENST00000425443		A0A0G2JMM0	328 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443		A0A1W2PPB8	328 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443		A0A1W2PRS3	328 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	MED19	A0JLT2	244 aa	Predicted RBP	11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	KIR3DP1	A8MWS1	328 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	IGHE	P01854	428 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	ZNF44	P15621	663 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	FPR2	P25090	351 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	GDF1	P27539	372 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	HTR5A	P47898	357 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	RAC3	P60763	192 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	TSPO2	Q5TGU0	170 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	TMEM123	Q8N131	208 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	SCGB3A2	Q96PL1	93 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	AQP10	Q96PS8	301 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	RCC2	Q9P258	522 aa	Known RBP	11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	TCFL5	Q9UL49	500 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	MCTS1	Q9ULC4	181 aa	Known RBP	11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	DLEU1	O43261	78 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	OR8U8	P0C7N1	319 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	HKR1	P10072	659 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	B4GALT1	P15291	398 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	WIPI1	Q5MNZ9	446 aa	Predicted RBP	11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	PLXDC2	Q6UX71	529 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	SEMA6D	Q8NFY4	1073 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	NABP1	Q96AH0	204 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	ZNF2	Q9BSG1	426 aa	Predicted RBP	11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	LOXL2	Q9Y4K0	774 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443		A0A0U1RQV5	110 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	DHRS7C	A6NNS2	312 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	TCF21	O43680	179 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	JMJD7	P0C870	316 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	DAO	P14920	347 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	ZNF708	P17019	499 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	CPT2	P23786	658 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	SRD5A2	P31213	254 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	SMIM8	Q96KF7	97 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	FAAP24	Q9BTP7	215 aa		11.29	□□□□□ -0.6
COL12A1-205	ENST00000425443	CCDC187	A0A096LP49	1063 aa		11.28	□□□□□ -0.6
COL12A1-205	ENST00000425443	YIF1A	O95070	293 aa		11.28	□□□□□ -0.6
COL12A1-205	ENST00000425443	CTSS	P25774	331 aa		11.28	□□□□□ -0.6
COL12A1-205	ENST00000425443	RBX1	P62877	108 aa		11.28	□□□□□ -0.6
COL12A1-205	ENST00000425443	RSU1	Q15404	277 aa		11.28	□□□□□ -0.6
COL12A1-205	ENST00000425443	RSPO1	Q2MKA7	263 aa	Predicted RBP	11.28	□□□□□ -0.6
COL12A1-205	ENST00000425443	IAH1	Q2TAA2	248 aa	Predicted RBP	11.28	□□□□□ -0.6
COL12A1-205	ENST00000425443	ZNF774	Q6NX45	483 aa		11.28	□□□□□ -0.6
COL12A1-205	ENST00000425443	C6orf15	Q6UXA7	325 aa	Predicted RBP	11.28	□□□□□ -0.6
COL12A1-205	ENST00000425443	ZIC4	Q8N9L1	334 aa		11.28	□□□□□ -0.6
COL12A1-205	ENST00000425443	ISOC2	Q96AB3	205 aa		11.28	□□□□□ -0.6
COL12A1-205	ENST00000425443	NECAB3	Q96P71	396 aa	Predicted RBP	11.28	□□□□□ -0.6
COL12A1-205	ENST00000425443	SEC11C	Q9BY50	192 aa		11.28	□□□□□ -0.6
COL12A1-205	ENST00000425443	FAM157A	C9JC47	383 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms