RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 FAM214BQ7L5A3 538 aa14.28□□□□□ -0.12
CMTM3-202ENST00000424011 MRPL21Q7Z2W9 205 aaKnown RBP14.28□□□□□ -0.12
CMTM3-202ENST00000424011 SLC25A42Q86VD7 318 aa14.28□□□□□ -0.12
CMTM3-202ENST00000424011 KCNRGQ8N5I3 272 aa14.28□□□□□ -0.12
CMTM3-202ENST00000424011 PIGCQ92535 297 aa14.28□□□□□ -0.12
CMTM3-202ENST00000424011 OCSTAMPQ9BR26 566 aa14.28□□□□□ -0.12
CMTM3-202ENST00000424011 EGLN1Q9GZT9 426 aa14.28□□□□□ -0.12
CMTM3-202ENST00000424011 ASF1BQ9NVP2 202 aa14.28□□□□□ -0.12
CMTM3-202ENST00000424011 SSUH2Q9Y2M2 353 aa14.28□□□□□ -0.12
CMTM3-202ENST00000424011 TRAV14DV4A0A0A6YYC5 116 aa14.27□□□□□ -0.12
CMTM3-202ENST00000424011 FOXI3A8MTJ6 420 aaPredicted RBP14.27□□□□□ -0.12
CMTM3-202ENST00000424011 GPR37O15354 613 aa14.27□□□□□ -0.12
CMTM3-202ENST00000424011 CA11O75493 328 aa14.27□□□□□ -0.12
CMTM3-202ENST00000424011 CNOT4O95628 575 aaKnown RBP14.27□□□□□ -0.12
CMTM3-202ENST00000424011 HLA-AP01891 365 aaKnown RBP14.27□□□□□ -0.12
CMTM3-202ENST00000424011 IFNA6P05013 189 aa14.27□□□□□ -0.12
CMTM3-202ENST00000424011 ZNF44P15621 663 aa14.27□□□□□ -0.12
CMTM3-202ENST00000424011 MUC1P15941 1255 aaPredicted RBP14.27□□□□□ -0.12
CMTM3-202ENST00000424011 BLVRBP30043 206 aaPredicted RBP14.27□□□□□ -0.12
CMTM3-202ENST00000424011 EIF2S3P41091 472 aaKnown RBP14.27□□□□□ -0.12
CMTM3-202ENST00000424011 ARFRP1Q13795 201 aa14.27□□□□□ -0.12
CMTM3-202ENST00000424011 C9orf152Q5JTZ5 239 aa14.27□□□□□ -0.12
CMTM3-202ENST00000424011 ASCL4Q6XD76 172 aa14.27□□□□□ -0.12
CMTM3-202ENST00000424011 ZDHHC22Q8N966 263 aa14.27□□□□□ -0.12
CMTM3-202ENST00000424011 SNIP1Q8TAD8 396 aaKnown RBP14.27□□□□□ -0.12
CMTM3-202ENST00000424011 FN3KRPQ9HA64 309 aa14.27□□□□□ -0.12
CMTM3-202ENST00000424011 PLSCR2Q9NRY7 297 aa14.27□□□□□ -0.12
CMTM3-202ENST00000424011 TREM2Q9NZC2 230 aa14.27□□□□□ -0.12
CMTM3-202ENST00000424011 ZNF503-AS2A6NEH8 195 aa14.27□□□□□ -0.13
CMTM3-202ENST00000424011 BCL2L11O43521 198 aa14.27□□□□□ -0.13
CMTM3-202ENST00000424011 ZBTB25P24278 435 aa14.27□□□□□ -0.13
CMTM3-202ENST00000424011 NFYBP25208 207 aa14.27□□□□□ -0.13
CMTM3-202ENST00000424011 PPP1R1AQ13522 171 aa14.27□□□□□ -0.13
CMTM3-202ENST00000424011 FAM76BQ5HYJ3 339 aa14.27□□□□□ -0.13
CMTM3-202ENST00000424011 OR2A2Q6IF42 318 aa14.27□□□□□ -0.13
CMTM3-202ENST00000424011 CSNK2A3Q8NEV1 391 aa14.27□□□□□ -0.13
CMTM3-202ENST00000424011 ZNF75AQ96N20 296 aa14.27□□□□□ -0.13
CMTM3-202ENST00000424011 DBX1A6NMT0 343 aa14.26□□□□□ -0.13
CMTM3-202ENST00000424011 AHRRA9YTQ3 701 aa14.26□□□□□ -0.13
CMTM3-202ENST00000424011 CLN5O75503 358 aa14.26□□□□□ -0.13
CMTM3-202ENST00000424011 CD34P28906 385 aa14.26□□□□□ -0.13
CMTM3-202ENST00000424011 ZNF345Q14585 488 aa14.26□□□□□ -0.13
CMTM3-202ENST00000424011 HIKESHIQ53FT3 197 aa14.26□□□□□ -0.13
CMTM3-202ENST00000424011 LIN54Q6MZP7 749 aa14.26□□□□□ -0.13
CMTM3-202ENST00000424011 ADAD2Q8NCV1 583 aaKnown RBP14.26□□□□□ -0.13
CMTM3-202ENST00000424011 OR5L1Q8NGL2 311 aa14.26□□□□□ -0.13
CMTM3-202ENST00000424011 Q96M66 194 aa14.26□□□□□ -0.13
CMTM3-202ENST00000424011 CNTNAP3BQ96NU0 1288 aa14.26□□□□□ -0.13
CMTM3-202ENST00000424011 IL36GQ9NZH8 169 aa14.26□□□□□ -0.13
CMTM3-202ENST00000424011 ZNF230Q9UIE0 474 aaPredicted RBP14.26□□□□□ -0.13
CMTM3-202ENST00000424011 CCL2P13500 99 aa14.26□□□□□ -0.13
CMTM3-202ENST00000424011 LYG2Q86SG7 212 aa14.26□□□□□ -0.13
CMTM3-202ENST00000424011 PECRQ9BY49 303 aa14.26□□□□□ -0.13
CMTM3-202ENST00000424011 NOP16Q9Y3C1 178 aaKnown RBP14.26□□□□□ -0.13
CMTM3-202ENST00000424011 FRYQ5TBA9 3013 aa14.26□□□□□ -0.13
CMTM3-202ENST00000424011 IGKV1-27A0A075B6S5 117 aa14.25□□□□□ -0.13
CMTM3-202ENST00000424011 A0A1B0GV90 55 aa14.25□□□□□ -0.13
CMTM3-202ENST00000424011 OR2F2O95006 317 aa14.25□□□□□ -0.13
CMTM3-202ENST00000424011 PPT1P50897 306 aa14.25□□□□□ -0.13
CMTM3-202ENST00000424011 RELQ04864 619 aaPredicted RBP14.25□□□□□ -0.13
CMTM3-202ENST00000424011 OR2F1Q13607 317 aa14.25□□□□□ -0.13
CMTM3-202ENST00000424011 C15orf54Q8N8G6 183 aa14.25□□□□□ -0.13
CMTM3-202ENST00000424011 TCTEX1D2Q8WW35 142 aa14.25□□□□□ -0.13
CMTM3-202ENST00000424011 ZNF471Q9BX82 626 aaPredicted RBP14.25□□□□□ -0.13
CMTM3-202ENST00000424011 C9orf170A2RU37 121 aa14.25□□□□□ -0.13
CMTM3-202ENST00000424011 NUDT19A8MXV4 375 aa14.25□□□□□ -0.13
CMTM3-202ENST00000424011 J3QW42 95 aa14.25□□□□□ -0.13
CMTM3-202ENST00000424011 CST4P01036 141 aa14.25□□□□□ -0.13
CMTM3-202ENST00000424011 IL2RAP01589 272 aa14.25□□□□□ -0.13
CMTM3-202ENST00000424011 UBE2NP61088 152 aaKnown RBP14.25□□□□□ -0.13
CMTM3-202ENST00000424011 MRPL49Q13405 166 aaKnown RBP14.25□□□□□ -0.13
CMTM3-202ENST00000424011 GUSBP1Q15486 140 aa14.25□□□□□ -0.13
CMTM3-202ENST00000424011 VAX1Q5SQQ9 334 aa14.25□□□□□ -0.13
CMTM3-202ENST00000424011 Q6ZT83 130 aa14.25□□□□□ -0.13
CMTM3-202ENST00000424011 HOGA1Q86XE5 327 aa14.25□□□□□ -0.13
CMTM3-202ENST00000424011 ZNF561Q8N587 486 aa14.25□□□□□ -0.13
CMTM3-202ENST00000424011 ZSCAN4Q8NAM6 433 aaPredicted RBP14.25□□□□□ -0.13
CMTM3-202ENST00000424011 OR56B2PQ8NGI1 322 aa14.25□□□□□ -0.13
CMTM3-202ENST00000424011 OR5M8Q8NGP6 311 aa14.25□□□□□ -0.13
CMTM3-202ENST00000424011 MARCH1Q8TCQ1 289 aa14.25□□□□□ -0.13
CMTM3-202ENST00000424011 POM121Q96HA1 1249 aa14.25□□□□□ -0.13
CMTM3-202ENST00000424011 PLEKHJ1Q9NW61 149 aa14.25□□□□□ -0.13
CMTM3-202ENST00000424011 ZNF407Q9C0G0 2248 aa14.24□□□□□ -0.13
CMTM3-202ENST00000424011 MYO7BQ6PIF6 2116 aa14.24□□□□□ -0.13
CMTM3-202ENST00000424011 ZNF850A8MQ14 1090 aa14.24□□□□□ -0.13
CMTM3-202ENST00000424011 CCSO14618 274 aa14.24□□□□□ -0.13
CMTM3-202ENST00000424011 FGF16O43320 207 aa14.24□□□□□ -0.13
CMTM3-202ENST00000424011 SPRY1O43609 319 aaPredicted RBP14.24□□□□□ -0.13
CMTM3-202ENST00000424011 RD3LP0DJH9 198 aa14.24□□□□□ -0.13
CMTM3-202ENST00000424011 AGAP20933 346 aa14.24□□□□□ -0.13
CMTM3-202ENST00000424011 SRSF3P84103 164 aaKnown RBP14.24□□□□□ -0.13
CMTM3-202ENST00000424011 ARRDC1Q8N5I2 433 aa14.24□□□□□ -0.13
CMTM3-202ENST00000424011 SLC30A7Q8NEW0 376 aa14.24□□□□□ -0.13
CMTM3-202ENST00000424011 ARL11Q969Q4 196 aa14.24□□□□□ -0.13
CMTM3-202ENST00000424011 ST6GALNAC5Q9BVH7 336 aa14.24□□□□□ -0.13
CMTM3-202ENST00000424011 HSF4Q9ULV5 492 aa14.24□□□□□ -0.13
CMTM3-202ENST00000424011 A0A1W2PPE3 182 aa14.24□□□□□ -0.13
CMTM3-202ENST00000424011 ANGPTL7O43827 346 aa14.24□□□□□ -0.13
CMTM3-202ENST00000424011 SLC34A2O95436 690 aa14.24□□□□□ -0.13
CMTM3-202ENST00000424011 IGHV2-5P01817 119 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms