RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 SIRPB1O00241 398 aa20.62■□□□□ 0.89
SMDT1-202ENST00000422252 ERP29P30040 261 aaKnown RBP20.62■□□□□ 0.89
SMDT1-202ENST00000422252 SSX2Q16385 188 aa20.62■□□□□ 0.89
SMDT1-202ENST00000422252 LDLRAD2Q5SZI1 272 aa20.62■□□□□ 0.89
SMDT1-202ENST00000422252 OR5D18Q8NGL1 313 aa20.62■□□□□ 0.89
SMDT1-202ENST00000422252 OR2T6Q8NHC8 308 aa20.62■□□□□ 0.89
SMDT1-202ENST00000422252 RHOFQ9HBH0 211 aa20.62■□□□□ 0.89
SMDT1-202ENST00000422252 ABCB10Q9NRK6 738 aa20.62■□□□□ 0.89
SMDT1-202ENST00000422252 MEGF11A6BM72 1044 aa20.61■□□□□ 0.89
SMDT1-202ENST00000422252 TMEM212A6NML5 194 aa20.61■□□□□ 0.89
SMDT1-202ENST00000422252 EBAG9O00559 213 aa20.61■□□□□ 0.89
SMDT1-202ENST00000422252 ZFPL1O95159 310 aa20.61■□□□□ 0.89
SMDT1-202ENST00000422252 TSPAN15O95858 294 aa20.61■□□□□ 0.89
SMDT1-202ENST00000422252 OR2H2O95918 312 aa20.61■□□□□ 0.89
SMDT1-202ENST00000422252 RAB13P51153 203 aa20.61■□□□□ 0.89
SMDT1-202ENST00000422252 P2RX3P56373 397 aa20.61■□□□□ 0.89
SMDT1-202ENST00000422252 HERPUD1Q15011 391 aa20.61■□□□□ 0.89
SMDT1-202ENST00000422252 C2orf68Q2NKX9 166 aa20.61■□□□□ 0.89
SMDT1-202ENST00000422252 TRAPPC6BQ86SZ2 158 aa20.61■□□□□ 0.89
SMDT1-202ENST00000422252 SAXO1Q8IYX7 474 aa20.61■□□□□ 0.89
SMDT1-202ENST00000422252 DTX3Q8N9I9 347 aa20.61■□□□□ 0.89
SMDT1-202ENST00000422252 RPS4Y2Q8TD47 263 aa20.61■□□□□ 0.89
SMDT1-202ENST00000422252 CDCA4Q9BXL8 241 aa20.61■□□□□ 0.89
SMDT1-202ENST00000422252 COMMD4Q9H0A8 199 aa20.61■□□□□ 0.89
SMDT1-202ENST00000422252 MRPS18AQ9NVS2 196 aaKnown RBP20.61■□□□□ 0.89
SMDT1-202ENST00000422252 TCF19Q9Y242 345 aa20.61■□□□□ 0.89
SMDT1-202ENST00000422252 UBE2J1Q9Y385 318 aaPredicted RBP20.61■□□□□ 0.89
SMDT1-202ENST00000422252 RPL36Q9Y3U8 105 aaKnown RBP20.61■□□□□ 0.89
SMDT1-202ENST00000422252 PCDHGB5Q9Y5G0 923 aa20.61■□□□□ 0.89
SMDT1-202ENST00000422252 IGHV2-26A0A0B4J1V2 119 aa20.6■□□□□ 0.89
SMDT1-202ENST00000422252 ALX3O95076 343 aa20.6■□□□□ 0.89
SMDT1-202ENST00000422252 CCDC159P0C7I6 412 aa20.6■□□□□ 0.89
SMDT1-202ENST00000422252 Q6ZTK2 550 aa20.6■□□□□ 0.89
SMDT1-202ENST00000422252 SERPINA12Q8IW75 414 aa20.6■□□□□ 0.89
SMDT1-202ENST00000422252 OR52I1Q8NGK6 324 aa20.6■□□□□ 0.89
SMDT1-202ENST00000422252 OR5D14Q8NGL3 314 aa20.6■□□□□ 0.89
SMDT1-202ENST00000422252 OR5AK2Q8NH90 309 aa20.6■□□□□ 0.89
SMDT1-202ENST00000422252 APH1BQ8WW43 257 aa20.6■□□□□ 0.89
SMDT1-202ENST00000422252 PDCD1LG2Q9BQ51 273 aa20.6■□□□□ 0.89
SMDT1-202ENST00000422252 DHDHQ9UQ10 334 aa20.6■□□□□ 0.89
SMDT1-202ENST00000422252 E9PI62 339 aa20.59■□□□□ 0.89
SMDT1-202ENST00000422252 HCKP08631 526 aa20.59■□□□□ 0.89
SMDT1-202ENST00000422252 LMO1P25800 156 aa20.59■□□□□ 0.89
SMDT1-202ENST00000422252 GBX2P52951 348 aaPredicted RBP20.59■□□□□ 0.89
SMDT1-202ENST00000422252 KLHL22Q53GT1 634 aa20.59■□□□□ 0.89
SMDT1-202ENST00000422252 MINOS1Q5TGZ0 78 aa20.59■□□□□ 0.89
SMDT1-202ENST00000422252 PARP16Q8N5Y8 322 aa20.59■□□□□ 0.89
SMDT1-202ENST00000422252 NKX3-1Q99801 234 aaPredicted RBP20.59■□□□□ 0.89
SMDT1-202ENST00000422252 TMEM133Q9H2Q1 129 aa20.59■□□□□ 0.89
SMDT1-202ENST00000422252 FOXJ3Q9UPW0 622 aa20.59■□□□□ 0.89
SMDT1-202ENST00000422252 MINOS1-NBL1R4GNA1 71 aa20.59■□□□□ 0.89
SMDT1-202ENST00000422252 FUOMA2VDF0 154 aa20.58■□□□□ 0.89
SMDT1-202ENST00000422252 SULT1B1O43704 296 aa20.58■□□□□ 0.89
SMDT1-202ENST00000422252 KISS1Q15726 138 aa20.58■□□□□ 0.89
SMDT1-202ENST00000422252 CCBE1Q6UXH8 406 aaPredicted RBP20.58■□□□□ 0.89
SMDT1-202ENST00000422252 KLHDC1Q8N7A1 406 aa20.58■□□□□ 0.89
SMDT1-202ENST00000422252 HAVCR2Q8TDQ0 301 aa20.58■□□□□ 0.89
SMDT1-202ENST00000422252 TSEN15Q8WW01 171 aaKnown RBP20.58■□□□□ 0.89
SMDT1-202ENST00000422252 CLEC7AQ9BXN2 247 aa20.58■□□□□ 0.89
SMDT1-202ENST00000422252 PITPNC1Q9UKF7 332 aa20.58■□□□□ 0.89
SMDT1-202ENST00000422252 TRGV10A0A0A0MS01 117 aa20.57■□□□□ 0.88
SMDT1-202ENST00000422252 A6NDX4 124 aa20.57■□□□□ 0.88
SMDT1-202ENST00000422252 MMP23AO75900 390 aa20.57■□□□□ 0.88
SMDT1-202ENST00000422252 CSF1P09603 554 aa20.57■□□□□ 0.88
SMDT1-202ENST00000422252 TMEM225BP0DP42 221 aa20.57■□□□□ 0.88
SMDT1-202ENST00000422252 ZNF44P15621 663 aa20.57■□□□□ 0.88
SMDT1-202ENST00000422252 DYNLT3P51808 116 aa20.57■□□□□ 0.88
SMDT1-202ENST00000422252 ZP1P60852 638 aa20.57■□□□□ 0.88
SMDT1-202ENST00000422252 PDLIM3Q53GG5 364 aaPredicted RBP20.57■□□□□ 0.88
SMDT1-202ENST00000422252 FAM110DQ8TAY7 271 aaPredicted RBP20.57■□□□□ 0.88
SMDT1-202ENST00000422252 NDNFQ8TB73 568 aa20.57■□□□□ 0.88
SMDT1-202ENST00000422252 GAL3ST2Q9H3Q3 398 aa20.57■□□□□ 0.88
SMDT1-202ENST00000422252 HILPDAQ9Y5L2 63 aa20.57■□□□□ 0.88
SMDT1-202ENST00000422252 TET2Q6N021 2002 aaPredicted RBP20.56■□□□□ 0.88
SMDT1-202ENST00000422252 A0A0G2JK05 382 aa20.56■□□□□ 0.88
SMDT1-202ENST00000422252 BAG2O95816 211 aa20.56■□□□□ 0.88
SMDT1-202ENST00000422252 SCN1BQ07699 218 aa20.56■□□□□ 0.88
SMDT1-202ENST00000422252 AESQ08117 197 aa20.56■□□□□ 0.88
SMDT1-202ENST00000422252 LPCAT4Q643R3 524 aa20.56■□□□□ 0.88
SMDT1-202ENST00000422252 Q6P435 159 aa20.56■□□□□ 0.88
SMDT1-202ENST00000422252 TMEM219Q86XT9 240 aa20.56■□□□□ 0.88
SMDT1-202ENST00000422252 CHST4Q8NCG5 386 aa20.56■□□□□ 0.88
SMDT1-202ENST00000422252 ZNF555Q8NEP9 628 aa20.56■□□□□ 0.88
SMDT1-202ENST00000422252 CORO2AQ92828 525 aa20.56■□□□□ 0.88
SMDT1-202ENST00000422252 RDH12Q96NR8 316 aa20.56■□□□□ 0.88
SMDT1-202ENST00000422252 JAM3Q9BX67 310 aa20.56■□□□□ 0.88
SMDT1-202ENST00000422252 ZNF702PQ9H963 129 aa20.56■□□□□ 0.88
SMDT1-202ENST00000422252 SMPD3Q9NY59 655 aaPredicted RBP20.56■□□□□ 0.88
SMDT1-202ENST00000422252 LIMS3P0CW19 117 aa20.55■□□□□ 0.88
SMDT1-202ENST00000422252 LIMS4P0CW20 117 aa20.55■□□□□ 0.88
SMDT1-202ENST00000422252 GLIPR1P48060 266 aa20.55■□□□□ 0.88
SMDT1-202ENST00000422252 SLC34A1Q06495 639 aa20.55■□□□□ 0.88
SMDT1-202ENST00000422252 IL18R1Q13478 541 aa20.55■□□□□ 0.88
SMDT1-202ENST00000422252 PRAMEF5Q5TYX0 476 aa20.55■□□□□ 0.88
SMDT1-202ENST00000422252 ZNF691Q5VV52 312 aa20.55■□□□□ 0.88
SMDT1-202ENST00000422252 OR52W1Q6IF63 320 aa20.55■□□□□ 0.88
SMDT1-202ENST00000422252 CFHR4Q92496 578 aa20.55■□□□□ 0.88
SMDT1-202ENST00000422252 FGF20Q9NP95 211 aaPredicted RBP20.55■□□□□ 0.88
SMDT1-202ENST00000422252 TAS2R3Q9NYW6 316 aa20.55■□□□□ 0.88
SMDT1-202ENST00000422252 F2RL2O00254 374 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms