RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 EDDM3BP56851 147 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 RPS27AP62979 156 aaKnown RBP7.08□□□□□ -1.28
TRIM48-201ENST00000417545 COL10A1Q03692 680 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 EDDM3AQ14507 147 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 PDCD1Q15116 288 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 GRK1Q15835 563 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 UBE2NLQ5JXB2 153 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 FAM166AQ6J272 317 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 NR2C2APQ86WQ0 139 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 FAM216BQ8N7L0 139 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 TMEM104Q8NE00 496 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 WFDC11Q8NEX6 87 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 MCFD2Q8NI22 146 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 ANGPTL6Q8NI99 470 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 SLC25A28Q96A46 364 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 GAFA1Q96PS6 74 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 SSBP3Q9BWW4 388 aaPredicted RBP7.08□□□□□ -1.28
TRIM48-201ENST00000417545 RBM38Q9H0Z9 239 aaKnown RBP7.08□□□□□ -1.28
TRIM48-201ENST00000417545 PATZ1Q9HBE1 687 aaKnown RBP7.08□□□□□ -1.28
TRIM48-201ENST00000417545 CHMP1AQ9HD42 196 aaPredicted RBP7.08□□□□□ -1.28
TRIM48-201ENST00000417545 DIABLOQ9NR28 239 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 PLEKHJ1Q9NW61 149 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 RHBDL2Q9NX52 303 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 ING3Q9NXR8 418 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 SLC25A10Q9UBX3 287 aaPredicted RBP7.08□□□□□ -1.28
TRIM48-201ENST00000417545 OR5V1Q9UGF6 321 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 SPATA2Q9UM82 520 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 ARID1AO14497 2285 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 IGKV1D-17A0A075B6S4 117 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 IGHV4-61A0A0C4DH41 118 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 A0A1W2PQ09 198 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.07□□□□□ -1.28
TRIM48-201ENST00000417545 H7C1Q1 480 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 SIGLEC5O15389 551 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 FSTL3O95633 263 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 IGHV2-5P01817 119 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 CFPP27918 469 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 BLVRBP30043 206 aaPredicted RBP7.07□□□□□ -1.28
TRIM48-201ENST00000417545 UNC119Q13432 240 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 ATXN7L3Q14CW9 347 aaPredicted RBP7.07□□□□□ -1.28
TRIM48-201ENST00000417545 ARL6IP1Q15041 203 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 ZNF146Q15072 292 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 NHLRC3Q5JS37 347 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 RAB12Q6IQ22 244 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 CRIP3Q6Q6R5 217 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 LYPD2Q6UXB3 125 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 ZNF788Q6ZQV5 615 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 TRAPPC6BQ86SZ2 158 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 LYPD6Q86Y78 171 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 CD177Q8N6Q3 437 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 ZNRF1Q8ND25 227 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 OR5D13Q8NGL4 314 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 DYNC2LI1Q8TCX1 351 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 PTX4Q96A99 478 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 S100A16Q96FQ6 103 aaKnown RBP7.07□□□□□ -1.28
TRIM48-201ENST00000417545 SNX22Q96L94 193 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 Q96M66 194 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 CHST6Q9GZX3 395 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 PPA2Q9H2U2 334 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 PEX16Q9Y5Y5 336 aa7.07□□□□□ -1.28
TRIM48-201ENST00000417545 FBN2P35556 2912 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 A0A1W2PPH5 198 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 VWC2LB2RUY7 222 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 DVL1O14640 695 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 PDCD6O75340 191 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 FOXH1O75593 365 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 FUT3P21217 361 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 MNDAP41218 407 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 DYNC1I2Q13409 638 aaKnown RBP7.06□□□□□ -1.28
TRIM48-201ENST00000417545 ARFRP1Q13795 201 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 ATPAF1Q5TC12 328 aaPredicted RBP7.06□□□□□ -1.28
TRIM48-201ENST00000417545 CD276Q5ZPR3 534 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 Q6ZTK2 550 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 FAM185AQ8N0U4 392 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 OR8H2Q8N162 312 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 SUMF2Q8NBJ7 301 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 MAPK1IP1LQ8NDC0 245 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 OR5H6Q8NGV6 325 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 SETD6Q8TBK2 473 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 RAB40AQ8WXH6 277 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 RAB3CQ96E17 227 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 SDSLQ96GA7 329 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 POM121Q96HA1 1249 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 C1orf147Q96MC9 270 aaPredicted RBP7.06□□□□□ -1.28
TRIM48-201ENST00000417545 NICN1Q9BSH3 213 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 DPCDQ9BVM2 203 aaPredicted RBP7.06□□□□□ -1.28
TRIM48-201ENST00000417545 BARHL1Q9BZE3 327 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 FAM234AQ9H0X4 552 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 LPAR5Q9H1C0 372 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 LPAR2Q9HBW0 351 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 ETAA1Q9NY74 926 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 KAAG1Q9UBP8 84 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 FBLN5Q9UBX5 448 aa7.06□□□□□ -1.28
TRIM48-201ENST00000417545 UBE2QL1A1L167 161 aa7.05□□□□□ -1.28
TRIM48-201ENST00000417545 SLC33A1O00400 549 aaPredicted RBP7.05□□□□□ -1.28
TRIM48-201ENST00000417545 MGST3O14880 152 aa7.05□□□□□ -1.28
TRIM48-201ENST00000417545 PHF1O43189 567 aaPredicted RBP7.05□□□□□ -1.28
TRIM48-201ENST00000417545 HPGDSO60760 199 aa7.05□□□□□ -1.28
TRIM48-201ENST00000417545 TK1P04183 234 aa7.05□□□□□ -1.28
TRIM48-201ENST00000417545 WNT2P09544 360 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms