RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 ASCL4Q6XD76 172 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 CPT1CQ8TCG5 803 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 NTNG2Q96CW9 530 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 IL36RNQ9UBH0 155 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 GJE1A6NN92 205 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 NXPH3O95157 252 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 PDGFBP01127 241 aaPredicted RBP12.5□□□□□ -0.41
HDAC9-208ENST00000417496 HEXAP06865 529 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 DANCRP0C864 163 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 SNCAP37840 140 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 SRYQ05066 204 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 MALLQ13021 153 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 CLINT1Q14677 625 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 DMBX1Q8NFW5 382 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 LYPD6BQ8NI32 183 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 ZNF286AQ9HBT8 521 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 SLC7A11Q9UPY5 501 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 STARD10Q9Y365 291 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 ASPMQ8IZT6 3477 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 LRRC3CA6NJW4 275 aa12.49□□□□□ -0.41
HDAC9-208ENST00000417496 H7C1Q1 480 aa12.49□□□□□ -0.41
HDAC9-208ENST00000417496 PDCD6O75340 191 aa12.49□□□□□ -0.41
HDAC9-208ENST00000417496 DUSP1P28562 367 aa12.49□□□□□ -0.41
HDAC9-208ENST00000417496 SRD5A2P31213 254 aa12.49□□□□□ -0.41
HDAC9-208ENST00000417496 CAMLGP49069 296 aa12.49□□□□□ -0.41
HDAC9-208ENST00000417496 RBM11P57052 281 aaKnown RBP12.49□□□□□ -0.41
HDAC9-208ENST00000417496 SCRT1Q9BWW7 348 aa12.49□□□□□ -0.41
HDAC9-208ENST00000417496 MAGT1Q9H0U3 335 aa12.49□□□□□ -0.41
HDAC9-208ENST00000417496 GPR35Q9HC97 309 aa12.49□□□□□ -0.41
HDAC9-208ENST00000417496 BIN3Q9NQY0 253 aa12.49□□□□□ -0.41
HDAC9-208ENST00000417496 FBXO7Q9Y3I1 522 aa12.49□□□□□ -0.41
HDAC9-208ENST00000417496 DOCK7Q96N67 2140 aa12.49□□□□□ -0.41
HDAC9-208ENST00000417496 NKX2-6A6NCS4 301 aa12.49□□□□□ -0.41
HDAC9-208ENST00000417496 PPYP01298 95 aa12.49□□□□□ -0.41
HDAC9-208ENST00000417496 CBR1P16152 277 aa12.49□□□□□ -0.41
HDAC9-208ENST00000417496 FUT6P51993 359 aa12.49□□□□□ -0.41
HDAC9-208ENST00000417496 SNRPEP62304 92 aaKnown RBP12.49□□□□□ -0.41
HDAC9-208ENST00000417496 GUK1Q16774 197 aa12.49□□□□□ -0.41
HDAC9-208ENST00000417496 SPINK14Q6IE38 97 aa12.49□□□□□ -0.41
HDAC9-208ENST00000417496 MOB3AQ96BX8 217 aa12.49□□□□□ -0.41
HDAC9-208ENST00000417496 SMOC1Q9H4F8 434 aa12.49□□□□□ -0.41
HDAC9-208ENST00000417496 SPACA1Q9HBV2 294 aa12.49□□□□□ -0.41
HDAC9-208ENST00000417496 FAM24AA6NFZ4 105 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 ST8SIA3O43173 380 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 GPR137BO60478 399 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 GNRHRP30968 328 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 FOXG1P55316 489 aaPredicted RBP12.48□□□□□ -0.41
HDAC9-208ENST00000417496 HABP2Q14520 560 aaPredicted RBP12.48□□□□□ -0.41
HDAC9-208ENST00000417496 AWAT1Q58HT5 328 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 SPIN3Q5JUX0 258 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 TMEM182Q6ZP80 229 aaPredicted RBP12.48□□□□□ -0.41
HDAC9-208ENST00000417496 LGI3Q8N145 548 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 HPSE2Q8WWQ2 592 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 SGCZQ96LD1 299 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 USB1Q9BQ65 265 aaKnown RBP12.48□□□□□ -0.41
HDAC9-208ENST00000417496 ABHD14AQ9BUJ0 271 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 SUCNR1Q9BXA5 334 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 SLC7A10Q9NS82 523 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 COA4Q9NYJ1 87 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 M0R036 132 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 SCTP09683 121 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 FUT3P21217 361 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 GDF1P27539 372 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 PPP1CCP36873 323 aaKnown RBP12.48□□□□□ -0.41
HDAC9-208ENST00000417496 P2RY1P47900 373 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 HERV-K104P61576 105 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 POLR2GP62487 172 aaKnown RBP eCLIP12.48□□□□□ -0.41
HDAC9-208ENST00000417496 ZFP36L1Q07352 338 aaKnown RBP12.48□□□□□ -0.41
HDAC9-208ENST00000417496 KRTAP27-1Q3LI81 207 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 CCDC54Q8NEL0 328 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 OR2V1Q8NHB1 315 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 SLAMF9Q96A28 289 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 PAPOLGQ9BWT3 736 aaKnown RBP12.48□□□□□ -0.41
HDAC9-208ENST00000417496 ARV1Q9H2C2 271 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 SMCO4Q9NRQ5 59 aa12.48□□□□□ -0.41
HDAC9-208ENST00000417496 BORCS7-ASMTA0A0B4J1R7 106 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 ZNF816-ZNF321PA0A0X1KG74 233 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 C3orf85A0A1B0GTC6 90 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 C7orf77A4D0Y5 90 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 NTN3O00634 580 aaPredicted RBP12.47□□□□□ -0.41
HDAC9-208ENST00000417496 GPR37O15354 613 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 MPPED1O15442 326 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 SEC11BP0C7V7 166 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 BCL3P20749 454 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 PPP1R32Q7Z5V6 425 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 LRTM2Q8N967 370 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 FAM213BQ8TBF2 198 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 SFT2D1Q8WV19 159 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 ADGRG7Q96K78 797 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 SYT3Q9BQG1 590 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 FGF23Q9GZV9 251 aaPredicted RBP12.47□□□□□ -0.41
HDAC9-208ENST00000417496 C19orf12Q9NSK7 152 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 LOC400499M0QZD8 3231 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 HLA-HP01893 362 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 ARG1P05089 322 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 CYC1P08574 325 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 OR13C7P0DN81 318 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 GLP1RP43220 463 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 HAAOP46952 286 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 GPM6AP51674 278 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms