RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 TRAT1Q6PIZ9 186 aa4.59□□□□□ -1.68
LMBR1-204ENST00000415428 ANKRD13BQ86YJ7 626 aa4.59□□□□□ -1.68
LMBR1-204ENST00000415428 ABHD12Q8N2K0 398 aa4.59□□□□□ -1.68
LMBR1-204ENST00000415428 FAM86B1Q8N7N1 296 aa4.59□□□□□ -1.68
LMBR1-204ENST00000415428 CMC2Q9NRP2 79 aa4.59□□□□□ -1.68
LMBR1-204ENST00000415428 MOSP00540 346 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 LPLP06858 475 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 CAPGP40121 348 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 RAB9AP51151 201 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 ABCA11PQ4W5N1 156 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 FAM131AQ6UXB0 335 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 HMGN2P46Q86SG4 172 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 CDH26Q8IXH8 852 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 ELMOD2Q8IZ81 293 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 DNAJC9Q8WXX5 260 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 RPL3LQ92901 407 aaKnown RBP4.58□□□□□ -1.68
LMBR1-204ENST00000415428 UTP4Q969X6 686 aaKnown RBP4.58□□□□□ -1.68
LMBR1-204ENST00000415428 KIRREL1Q96J84 757 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 HMG20AQ9NP66 347 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 IDI2-AS1Q9NZ38 188 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 IL1AP01583 271 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 CCL3L1P16619 93 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 ZP3P21754 424 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 IDH3AP50213 366 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 ELF3P78545 371 aaPredicted RBP4.58□□□□□ -1.68
LMBR1-204ENST00000415428 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.58□□□□□ -1.68
LMBR1-204ENST00000415428 IFI44LQ53G44 452 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 NRMQ8IXM6 262 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 BOLLQ8N9W6 283 aaKnown RBP4.58□□□□□ -1.68
LMBR1-204ENST00000415428 SLC37A3Q8NCC5 494 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 PXT1Q8NFP0 134 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 EPS8L3Q8TE67 593 aaKnown RBP4.58□□□□□ -1.68
LMBR1-204ENST00000415428 EAF1Q96JC9 268 aaPredicted RBP4.58□□□□□ -1.68
LMBR1-204ENST00000415428 SPACA5Q96QH8 159 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 PNPOQ9NVS9 261 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 SLC22A13Q9Y226 551 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 IGHV1-3A0A0C4DH29 117 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 TMEM11P17152 192 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 GLP1RP43220 463 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 DHDDSQ86SQ9 333 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 TMEM219Q86XT9 240 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 ZNRF1Q8ND25 227 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 SLC7A6Q92536 515 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 DLX4Q92988 240 aaPredicted RBP4.58□□□□□ -1.68
LMBR1-204ENST00000415428 USMG5Q96IX5 58 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 CLUHP3Q96NS8 147 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 GGTLC1Q9BX51 225 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 CHST5Q9GZS9 411 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 WDR13Q9H1Z4 485 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 TNFRSF19Q9NS68 423 aa4.58□□□□□ -1.68
LMBR1-204ENST00000415428 DHRS12A0PJE2 317 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 C12orf77C9JDV5 145 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 HIST1H1CP16403 213 aaKnown RBP4.57□□□□□ -1.68
LMBR1-204ENST00000415428 GNALP38405 381 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 PTGFRP43088 359 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 FUT6P51993 359 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 RIDAP52758 137 aaKnown RBP4.57□□□□□ -1.68
LMBR1-204ENST00000415428 RNF212Q495C1 297 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 MORN3Q6PF18 240 aaPredicted RBP4.57□□□□□ -1.68
LMBR1-204ENST00000415428 C4orf33Q8N1A6 199 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 OR2T27Q8NH04 317 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 OR8S1Q8NH09 359 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 RTN4IP1Q8WWV3 396 aaPredicted RBP4.57□□□□□ -1.68
LMBR1-204ENST00000415428 COQ2Q96H96 371 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 OR52B2Q96RD2 323 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 ZNF436Q9C0F3 470 aaPredicted RBP4.57□□□□□ -1.68
LMBR1-204ENST00000415428 NDUFAF4Q9P032 175 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 FBXL7Q9UJT9 491 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 ADAM18Q9Y3Q7 739 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.57□□□□□ -1.68
LMBR1-204ENST00000415428 TRBV6-6A0A0A6YYG2 114 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 IGHV7-81A0A0B4J1V7 117 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 ALOX5APP20292 161 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 IFNA8P32881 189 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 RIPPLY1Q0D2K3 151 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 CYLC2Q14093 348 aaPredicted RBP4.57□□□□□ -1.68
LMBR1-204ENST00000415428 PLA1AQ53H76 456 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 RSBN1Q5VWQ0 802 aaPredicted RBP4.57□□□□□ -1.68
LMBR1-204ENST00000415428 MICU2Q8IYU8 434 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 FAM185AQ8N0U4 392 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 OR8B12Q8NGG6 310 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 HAVCR2Q8TDQ0 301 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 CEPT1Q9Y6K0 416 aa4.57□□□□□ -1.68
LMBR1-204ENST00000415428 DEDDO75618 318 aa4.56□□□□□ -1.68
LMBR1-204ENST00000415428 GAPDHP04406 335 aaKnown RBP4.56□□□□□ -1.68
LMBR1-204ENST00000415428 DBTP11182 482 aaKnown RBP4.56□□□□□ -1.68
LMBR1-204ENST00000415428 IKZF1Q13422 519 aa4.56□□□□□ -1.68
LMBR1-204ENST00000415428 SNAPC1Q16533 368 aa4.56□□□□□ -1.68
LMBR1-204ENST00000415428 ZNF880Q6PDB4 577 aa4.56□□□□□ -1.68
LMBR1-204ENST00000415428 HAGHLQ6PII5 290 aaPredicted RBP4.56□□□□□ -1.68
LMBR1-204ENST00000415428 PTX4Q96A99 478 aa4.56□□□□□ -1.68
LMBR1-204ENST00000415428 SPSB1Q96BD6 273 aa4.56□□□□□ -1.68
LMBR1-204ENST00000415428 ASCL2Q99929 193 aa4.56□□□□□ -1.68
LMBR1-204ENST00000415428 NSRP1Q9H0G5 558 aaKnown RBP4.56□□□□□ -1.68
LMBR1-204ENST00000415428 MAGIXQ9H6Y5 334 aa4.56□□□□□ -1.68
LMBR1-204ENST00000415428 RAB9BQ9NP90 201 aa4.56□□□□□ -1.68
LMBR1-204ENST00000415428 PUS1Q9Y606 427 aaKnown RBP eCLIP4.56□□□□□ -1.68
LMBR1-204ENST00000415428 RFPL4AA6NLU0 287 aa4.56□□□□□ -1.68
LMBR1-204ENST00000415428 RFPL4AL1F8VTS6 287 aa4.56□□□□□ -1.68
LMBR1-204ENST00000415428 SPI1P17947 270 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms