RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 DPY19L4Q7Z388 723 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 HAPLN4Q86UW8 402 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 SLC30A7Q8NEW0 376 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 OR1L6Q8NGR2 347 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 RPS4Y2Q8TD47 263 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 NRIP2Q9BQI9 281 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 TMEM27Q9HBJ8 222 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 DUSP22Q9NRW4 184 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 TREM2Q9NZC2 230 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 RCC2Q9P258 522 aaKnown RBP8.18□□□□□ -1.1
SNHG3-201ENST00000413987 SMPXQ9UHP9 88 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 GNG8Q9UK08 70 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 PSG11Q9UQ72 335 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 ZNF337Q9Y3M9 751 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 NINQ8N4C6 2090 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 NKX6-3A6NJ46 265 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 M0QZ24 198 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 SULT2B1O00204 365 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 ICOSLGO75144 302 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 TMEM225BP0DP42 221 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 MAKP20794 623 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 PRSS3P35030 304 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 TAS2R19P59542 299 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 SSBP2P81877 361 aaPredicted RBP8.17□□□□□ -1.1
SNHG3-201ENST00000413987 LTBQ06643 244 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 EGR3Q06889 387 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 NKPD1Q17RQ9 610 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 FAM71F2Q6NXP2 309 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 STEAP1BQ6NZ63 245 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 BAP18Q8IXM2 172 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 DMRTC2Q8IXT2 367 aaPredicted RBP8.17□□□□□ -1.1
SNHG3-201ENST00000413987 SLC35F2Q8IXU6 374 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 LINC00528Q8N1L1 170 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 CDRT4Q8N9R6 151 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 OR5AP2Q8NGF4 316 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 OR11L1Q8NGX0 322 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 C10orf35Q96D05 121 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 PIK3IP1Q96FE7 263 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 ZNF681Q96N22 645 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 PFDN5Q99471 154 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 PDCD1LG2Q9BQ51 273 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 TUBA4BQ9H853 241 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 SEC61A2Q9H9S3 476 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 ZNF443Q9Y2A4 671 aaPredicted RBP8.17□□□□□ -1.1
SNHG3-201ENST00000413987 WDR45Q9Y484 360 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 FAM186AA6NE01 2351 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 BOD1L1Q8NFC6 3051 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 A0A1B0GV72 72 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 ANKUB1A6NFN9 424 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 PCNX2A6NKB5 2137 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 NPIPB9F8W1W9 429 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 NTN3O00634 580 aaPredicted RBP8.17□□□□□ -1.1
SNHG3-201ENST00000413987 PRKNO60260 465 aaPredicted RBP8.17□□□□□ -1.1
SNHG3-201ENST00000413987 SFTPBP07988 381 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 PTHLHP12272 177 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 ZNF14P17017 642 aaPredicted RBP8.17□□□□□ -1.1
SNHG3-201ENST00000413987 NFYBP25208 207 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 TSFMP43897 325 aaKnown RBP8.17□□□□□ -1.1
SNHG3-201ENST00000413987 RAB5CP51148 216 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 PRKXP51817 358 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 ATP1B3P54709 279 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 CLDN12P56749 244 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 ERVK11-1P61568 191 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 LINC01620Q4KN68 170 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 OR2B11Q5JQS5 317 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 UTF1Q5T230 341 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 LCN10Q6JVE6 187 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 ANKRD16Q6P6B7 361 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 STAC2Q6ZMT1 411 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 C19orf35Q6ZS72 473 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 C8orf31Q8N9H6 132 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 MOB3AQ96BX8 217 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 VSTM2LQ96N03 204 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 PRSS27Q9BQR3 290 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 CHST6Q9GZX3 395 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 ICAM5Q9UMF0 924 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 SIGLEC7Q9Y286 467 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 NTNG1Q9Y2I2 539 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 MED31Q9Y3C7 131 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 LSM4Q9Y4Z0 139 aaKnown RBP8.17□□□□□ -1.1
SNHG3-201ENST00000413987 KCNE3Q9Y6H6 103 aa8.17□□□□□ -1.1
SNHG3-201ENST00000413987 COL27A1Q8IZC6 1860 aaPredicted RBP8.16□□□□□ -1.1
SNHG3-201ENST00000413987 DMXL2Q8TDJ6 3036 aa8.16□□□□□ -1.1
SNHG3-201ENST00000413987 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.16□□□□□ -1.1
SNHG3-201ENST00000413987 ZNF705EA8MWA4 302 aaPredicted RBP8.16□□□□□ -1.1
SNHG3-201ENST00000413987 PRSS46E5RG02 174 aa8.16□□□□□ -1.1
SNHG3-201ENST00000413987 MAGEB4O15481 346 aaPredicted RBP8.16□□□□□ -1.1
SNHG3-201ENST00000413987 ZNF432O94892 652 aa8.16□□□□□ -1.1
SNHG3-201ENST00000413987 IGHV2-5P01817 119 aa8.16□□□□□ -1.1
SNHG3-201ENST00000413987 CD74P04233 296 aa8.16□□□□□ -1.1
SNHG3-201ENST00000413987 CT62P0C5K7 136 aa8.16□□□□□ -1.1
SNHG3-201ENST00000413987 NBEAP1P0C6P0 100 aa8.16□□□□□ -1.1
SNHG3-201ENST00000413987 ZNF883P0CG24 379 aa8.16□□□□□ -1.1
SNHG3-201ENST00000413987 CCKBRP32239 447 aa8.16□□□□□ -1.1
SNHG3-201ENST00000413987 TNFSF10P50591 281 aa8.16□□□□□ -1.1
SNHG3-201ENST00000413987 PLEKHN1Q494U1 663 aaPredicted RBP8.16□□□□□ -1.1
SNHG3-201ENST00000413987 TRMT12Q53H54 448 aaKnown RBP8.16□□□□□ -1.1
SNHG3-201ENST00000413987 TMEM244Q5VVB8 128 aa8.16□□□□□ -1.1
SNHG3-201ENST00000413987 ZNF529Q6P280 563 aa8.16□□□□□ -1.1
SNHG3-201ENST00000413987 TMEM205Q6UW68 189 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms