RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 OR14J1Q9UGF5 321 aa13.81□□□□□ -0.2
TSPAN4-208ENST00000409531 A3GALT2U3KPV4 340 aa13.81□□□□□ -0.2
TSPAN4-208ENST00000409531 HIVEP2P31629 2446 aa13.81□□□□□ -0.2
TSPAN4-208ENST00000409531 NIPBLQ6KC79 2804 aaeCLIP13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 A0A075B6Q4 140 aa13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 IGHV3OR15-7A0A075B7D8 119 aa13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 RFPL4AA6NLU0 287 aa13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 RFPL4AL1F8VTS6 287 aa13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 SCGNO76038 276 aa13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 RBMXP38159 391 aaKnown RBP13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 SNU13P55769 128 aaKnown RBP13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 HOXA4Q00056 320 aaPredicted RBP13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 KRTAP1-1Q07627 177 aa13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 PIGYQ3MUY2 71 aa13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 AVPI1Q5T686 147 aa13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 STUMQ69YW2 141 aa13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 DCDC5Q6ZRR9 648 aa13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 SLC36A1Q7Z2H8 476 aa13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 CHST4Q8NCG5 386 aa13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 MCFD2Q8NI22 146 aa13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 ANGPTL6Q8NI99 470 aa13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 PHF21AQ96BD5 680 aa13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 SEH1LQ96EE3 360 aa13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 TM2D1Q9BX74 207 aa13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 SPACA1Q9HBV2 294 aa13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 RHBDL2Q9NX52 303 aa13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 COMMD3Q9UBI1 195 aa13.8□□□□□ -0.2
TSPAN4-208ENST00000409531 CR1P17927 2039 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 IGKV1D-17A0A075B6S4 117 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 OR7C1O76099 320 aaPredicted RBP13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 HAND1O96004 215 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 GYPAP02724 150 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 CHRM2P08172 466 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 PRDX2P32119 198 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 GABRA2P47869 451 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 IKZF1Q13422 519 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 TMEM249Q2WGJ8 235 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 UBE2NLQ5JXB2 153 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 ATPAF1Q5TC12 328 aaPredicted RBP13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 SAMD12Q8N8I0 201 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 OR5T2Q8NGG2 359 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 OR56B1Q8NGI3 324 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 OR5H6Q8NGV6 325 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 RAB40AQ8WXH6 277 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 MED30Q96HR3 178 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 GAL3ST1Q99999 423 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 TMEM246Q9BRR3 403 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 LPAR5Q9H1C0 372 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 MMP27Q9H306 513 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 ZNF665Q9H7R5 613 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 IFT22Q9H7X7 185 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 IL36RNQ9UBH0 155 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 MIOXQ9UGB7 285 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 PCDHB10Q9UN67 800 aa13.79□□□□□ -0.2
TSPAN4-208ENST00000409531 IGHV4-61A0A0C4DH41 118 aa13.78□□□□□ -0.2
TSPAN4-208ENST00000409531 GEMIN2O14893 280 aaKnown RBP13.78□□□□□ -0.2
TSPAN4-208ENST00000409531 DEGS1O15121 323 aa13.78□□□□□ -0.2
TSPAN4-208ENST00000409531 RGS5O15539 181 aa13.78□□□□□ -0.2
TSPAN4-208ENST00000409531 ZNF44P15621 663 aa13.78□□□□□ -0.2
TSPAN4-208ENST00000409531 GABRR1P24046 479 aa13.78□□□□□ -0.2
TSPAN4-208ENST00000409531 DUSP1P28562 367 aa13.78□□□□□ -0.2
TSPAN4-208ENST00000409531 TAF9Q16594 264 aa13.78□□□□□ -0.2
TSPAN4-208ENST00000409531 CNPY1Q3B7I2 92 aa13.78□□□□□ -0.2
TSPAN4-208ENST00000409531 RAB12Q6IQ22 244 aa13.78□□□□□ -0.2
TSPAN4-208ENST00000409531 ZNF788Q6ZQV5 615 aa13.78□□□□□ -0.2
TSPAN4-208ENST00000409531 NLRC3Q7RTR2 1065 aa13.78□□□□□ -0.2
TSPAN4-208ENST00000409531 ZNF561Q8N587 486 aa13.78□□□□□ -0.2
TSPAN4-208ENST00000409531 FAM89BQ8N5H3 189 aa13.78□□□□□ -0.2
TSPAN4-208ENST00000409531 C6orf62Q9GZU0 229 aaPredicted RBP13.78□□□□□ -0.2
TSPAN4-208ENST00000409531 NXF2Q9GZY0 626 aaKnown RBP13.78□□□□□ -0.2
TSPAN4-208ENST00000409531 ATG5Q9H1Y0 275 aa13.78□□□□□ -0.2
TSPAN4-208ENST00000409531 ABCG5Q9H222 651 aa13.78□□□□□ -0.2
TSPAN4-208ENST00000409531 KAAG1Q9UBP8 84 aa13.78□□□□□ -0.2
TSPAN4-208ENST00000409531 ZNF222Q9UK12 451 aa13.78□□□□□ -0.2
TSPAN4-208ENST00000409531 ADAM30Q9UKF2 790 aa13.78□□□□□ -0.2
TSPAN4-208ENST00000409531 A0A0A6YYH2 397 aa13.77□□□□□ -0.21
TSPAN4-208ENST00000409531 A6NJ64 397 aa13.77□□□□□ -0.21
TSPAN4-208ENST00000409531 TMPRSS2O15393 492 aa13.77□□□□□ -0.21
TSPAN4-208ENST00000409531 ADAM20O43506 726 aa13.77□□□□□ -0.21
TSPAN4-208ENST00000409531 CD5LO43866 347 aa13.77□□□□□ -0.21
TSPAN4-208ENST00000409531 OR2H2O95918 312 aa13.77□□□□□ -0.21
TSPAN4-208ENST00000409531 APOA1P02647 267 aa13.77□□□□□ -0.21
TSPAN4-208ENST00000409531 LMO1P25800 156 aa13.77□□□□□ -0.21
TSPAN4-208ENST00000409531 PITPNBP48739 271 aa13.77□□□□□ -0.21
TSPAN4-208ENST00000409531 EFNB2P52799 333 aa13.77□□□□□ -0.21
TSPAN4-208ENST00000409531 IL13RA1P78552 427 aa13.77□□□□□ -0.21
TSPAN4-208ENST00000409531 SCN1BQ07699 218 aa13.77□□□□□ -0.21
TSPAN4-208ENST00000409531 PPP1R35Q8TAP8 253 aa13.77□□□□□ -0.21
TSPAN4-208ENST00000409531 S100A16Q96FQ6 103 aaKnown RBP13.77□□□□□ -0.21
TSPAN4-208ENST00000409531 SDSLQ96GA7 329 aa13.77□□□□□ -0.21
TSPAN4-208ENST00000409531 NEDD4LQ96PU5 975 aa13.77□□□□□ -0.21
TSPAN4-208ENST00000409531 DIABLOQ9NR28 239 aa13.77□□□□□ -0.21
TSPAN4-208ENST00000409531 CEACAM18A8MTB9 384 aa13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 TNFRSF13BO14836 293 aaPredicted RBP13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 SIGLEC5O15389 551 aa13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 RPS2P15880 293 aaKnown RBP13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 FUT3P21217 361 aa13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 VEGFCP49767 419 aa13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 COL10A1Q03692 680 aa13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 PLA2G7Q13093 441 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms