RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 GAL3ST1Q99999 423 aa17.1■□□□□ 0.33
VSX1-203ENST00000409285 SPACA1Q9HBV2 294 aa17.1■□□□□ 0.33
VSX1-203ENST00000409285 COMMD3Q9UBI1 195 aa17.1■□□□□ 0.33
VSX1-203ENST00000409285 A0A0A6YYD4 124 aa17.09■□□□□ 0.33
VSX1-203ENST00000409285 CHRM2P08172 466 aa17.09■□□□□ 0.33
VSX1-203ENST00000409285 SLC25A16P16260 332 aa17.09■□□□□ 0.33
VSX1-203ENST00000409285 AMY2BP19961 511 aa17.09■□□□□ 0.33
VSX1-203ENST00000409285 PRDX2P32119 198 aa17.09■□□□□ 0.33
VSX1-203ENST00000409285 NR4A2P43354 598 aa17.09■□□□□ 0.33
VSX1-203ENST00000409285 TAF9Q16594 264 aa17.09■□□□□ 0.33
VSX1-203ENST00000409285 AVPI1Q5T686 147 aa17.09■□□□□ 0.33
VSX1-203ENST00000409285 RAB12Q6IQ22 244 aa17.09■□□□□ 0.33
VSX1-203ENST00000409285 BIVMQ86UB2 503 aa17.09■□□□□ 0.33
VSX1-203ENST00000409285 ZNF561Q8N587 486 aa17.09■□□□□ 0.33
VSX1-203ENST00000409285 CD177Q8N6Q3 437 aa17.09■□□□□ 0.33
VSX1-203ENST00000409285 DEFB108BQ8NET1 73 aa17.09■□□□□ 0.33
VSX1-203ENST00000409285 OR56B1Q8NGI3 324 aa17.09■□□□□ 0.33
VSX1-203ENST00000409285 NICN1Q9BSH3 213 aa17.09■□□□□ 0.33
VSX1-203ENST00000409285 OTOGQ6ZRI0 2925 aa17.08■□□□□ 0.33
VSX1-203ENST00000409285 NKX6-3A6NJ46 265 aa17.08■□□□□ 0.32
VSX1-203ENST00000409285 RAB27BO00194 218 aa17.08■□□□□ 0.32
VSX1-203ENST00000409285 OR2H2O95918 312 aa17.08■□□□□ 0.32
VSX1-203ENST00000409285 GYPAP02724 150 aa17.08■□□□□ 0.32
VSX1-203ENST00000409285 IKZF1Q13422 519 aa17.08■□□□□ 0.32
VSX1-203ENST00000409285 SLC36A1Q7Z2H8 476 aa17.08■□□□□ 0.32
VSX1-203ENST00000409285 OR5T2Q8NGG2 359 aa17.08■□□□□ 0.32
VSX1-203ENST00000409285 GAFA1Q96PS6 74 aa17.08■□□□□ 0.32
VSX1-203ENST00000409285 C6orf62Q9GZU0 229 aaPredicted RBP17.08■□□□□ 0.32
VSX1-203ENST00000409285 ZNF665Q9H7R5 613 aa17.08■□□□□ 0.32
VSX1-203ENST00000409285 OR14J1Q9UGF5 321 aa17.08■□□□□ 0.32
VSX1-203ENST00000409285 ZNF469Q96JG9 3925 aaPredicted RBP17.08■□□□□ 0.32
VSX1-203ENST00000409285 IGHV4-30-2A0A087WSY4 118 aa17.07■□□□□ 0.32
VSX1-203ENST00000409285 ISPDA4D126 451 aa17.07■□□□□ 0.32
VSX1-203ENST00000409285 CEACAM18A8MTB9 384 aa17.07■□□□□ 0.32
VSX1-203ENST00000409285 SIGLEC5O15389 551 aa17.07■□□□□ 0.32
VSX1-203ENST00000409285 ZNF737O75373 536 aa17.07■□□□□ 0.32
VSX1-203ENST00000409285 OR7C1O76099 320 aaPredicted RBP17.07■□□□□ 0.32
VSX1-203ENST00000409285 DUSP1P28562 367 aa17.07■□□□□ 0.32
VSX1-203ENST00000409285 SNU13P55769 128 aaKnown RBP17.07■□□□□ 0.32
VSX1-203ENST00000409285 IL13RA1P78552 427 aa17.07■□□□□ 0.32
VSX1-203ENST00000409285 SIGIRRQ6IA17 410 aa17.07■□□□□ 0.32
VSX1-203ENST00000409285 MED30Q96HR3 178 aa17.07■□□□□ 0.32
VSX1-203ENST00000409285 WDFY2Q96P53 400 aa17.07■□□□□ 0.32
VSX1-203ENST00000409285 FAM234AQ9H0X4 552 aa17.07■□□□□ 0.32
VSX1-203ENST00000409285 MIOXQ9UGB7 285 aa17.07■□□□□ 0.32
VSX1-203ENST00000409285 F5H0A9 414 aaPredicted RBP17.06■□□□□ 0.32
VSX1-203ENST00000409285 SLC33A1O00400 549 aaPredicted RBP17.06■□□□□ 0.32
VSX1-203ENST00000409285 CTDSP2O14595 271 aa17.06■□□□□ 0.32
VSX1-203ENST00000409285 DEGS1O15121 323 aa17.06■□□□□ 0.32
VSX1-203ENST00000409285 HPGDSO60760 199 aa17.06■□□□□ 0.32
VSX1-203ENST00000409285 PDCD6O75340 191 aa17.06■□□□□ 0.32
VSX1-203ENST00000409285 CLPXO76031 633 aa17.06■□□□□ 0.32
VSX1-203ENST00000409285 GLAP06280 429 aa17.06■□□□□ 0.32
VSX1-203ENST00000409285 GABRR1P24046 479 aa17.06■□□□□ 0.32
VSX1-203ENST00000409285 LINC00299Q6ZSB3 139 aa17.06■□□□□ 0.32
VSX1-203ENST00000409285 CMTM4Q8IZR5 234 aa17.06■□□□□ 0.32
VSX1-203ENST00000409285 S100A16Q96FQ6 103 aaKnown RBP17.06■□□□□ 0.32
VSX1-203ENST00000409285 ATG5Q9H1Y0 275 aa17.06■□□□□ 0.32
VSX1-203ENST00000409285 MIXL1Q9H2W2 232 aa17.06■□□□□ 0.32
VSX1-203ENST00000409285 ADAM30Q9UKF2 790 aa17.06■□□□□ 0.32
VSX1-203ENST00000409285 ITGB1BP2Q9UKP3 347 aa17.06■□□□□ 0.32
VSX1-203ENST00000409285 HSF4Q9ULV5 492 aa17.06■□□□□ 0.32
VSX1-203ENST00000409285 MAB21L2Q9Y586 359 aa17.06■□□□□ 0.32
VSX1-203ENST00000409285 PEX16Q9Y5Y5 336 aa17.06■□□□□ 0.32
VSX1-203ENST00000409285 FLNAP21333 2647 aaKnown RBP17.06■□□□□ 0.32
VSX1-203ENST00000409285 CELSR1Q9NYQ6 3014 aa17.06■□□□□ 0.32
VSX1-203ENST00000409285 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.06■□□□□ 0.32
VSX1-203ENST00000409285 TRAV24A0A0B4J272 114 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 TMPRSS2O15393 492 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 CSN2P05814 226 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 EIF4EP06730 217 aaKnown RBP17.05■□□□□ 0.32
VSX1-203ENST00000409285 ZNF44P15621 663 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 ELK1P19419 428 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 FUT3P21217 361 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 CHATP28329 748 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 PITPNBP48739 271 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 CEBPDP49716 269 aaPredicted RBP17.05■□□□□ 0.32
VSX1-203ENST00000409285 VEGFCP49767 419 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 PAX5Q02548 391 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 COL10A1Q03692 680 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 LAX1Q8IWV1 398 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 OR10R2Q8NGX6 335 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 PATZ1Q9HBE1 687 aaKnown RBP17.05■□□□□ 0.32
VSX1-203ENST00000409285 MALRD1Q5VYJ5 2156 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 K7N7A8 449 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 RGS5O15539 181 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 GABRA2P47869 451 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 KCNJ3P48549 501 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 C17orf107Q6ZR85 190 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 NLRC3Q7RTR2 1065 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 SNX22Q96L94 193 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 CCL13Q99616 98 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.05■□□□□ 0.32
VSX1-203ENST00000409285 ZNF581Q9P0T4 197 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 CTSZQ9UBR2 303 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 METRNQ9UJH8 293 aa17.05■□□□□ 0.32
VSX1-203ENST00000409285 ZANQ9Y493 2812 aa17.04■□□□□ 0.32
VSX1-203ENST00000409285 A0A096LNT2 108 aa17.04■□□□□ 0.32
VSX1-203ENST00000409285 SOCS1O15524 211 aa17.04■□□□□ 0.32
VSX1-203ENST00000409285 ADAM20O43506 726 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms