RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 RPSAP08865 295 aaKnown RBP12.85□□□□□ -0.35
ATG4B-203ENST00000400772 LMO1P25800 156 aa12.85□□□□□ -0.35
ATG4B-203ENST00000400772 DCKP27707 260 aa12.85□□□□□ -0.35
ATG4B-203ENST00000400772 IL18R1Q13478 541 aa12.85□□□□□ -0.35
ATG4B-203ENST00000400772 KISS1Q15726 138 aa12.85□□□□□ -0.35
ATG4B-203ENST00000400772 LY6EQ16553 131 aa12.85□□□□□ -0.35
ATG4B-203ENST00000400772 AANATQ16613 207 aa12.85□□□□□ -0.35
ATG4B-203ENST00000400772 LRRC75BQ2VPJ9 315 aa12.85□□□□□ -0.35
ATG4B-203ENST00000400772 Q6P435 159 aa12.85□□□□□ -0.35
ATG4B-203ENST00000400772 PACRGLQ8N7B6 248 aa12.85□□□□□ -0.35
ATG4B-203ENST00000400772 OR11H6Q8NGC7 330 aa12.85□□□□□ -0.35
ATG4B-203ENST00000400772 RPS4Y2Q8TD47 263 aa12.85□□□□□ -0.35
ATG4B-203ENST00000400772 HAVCR2Q8TDQ0 301 aa12.85□□□□□ -0.35
ATG4B-203ENST00000400772 CYGBQ8WWM9 190 aa12.85□□□□□ -0.35
ATG4B-203ENST00000400772 ZNF714Q96N38 554 aa12.85□□□□□ -0.35
ATG4B-203ENST00000400772 COMMD4Q9H0A8 199 aa12.85□□□□□ -0.35
ATG4B-203ENST00000400772 PPA2Q9H2U2 334 aa12.85□□□□□ -0.35
ATG4B-203ENST00000400772 CLEC2DQ9UHP7 191 aa12.85□□□□□ -0.35
ATG4B-203ENST00000400772 LINC00312Q9Y6C7 94 aa12.85□□□□□ -0.35
ATG4B-203ENST00000400772 A0A0G2JK05 382 aa12.84□□□□□ -0.35
ATG4B-203ENST00000400772 SIRPB1O00241 398 aa12.84□□□□□ -0.35
ATG4B-203ENST00000400772 SH2D1BO14796 132 aa12.84□□□□□ -0.35
ATG4B-203ENST00000400772 MMP23AO75900 390 aa12.84□□□□□ -0.35
ATG4B-203ENST00000400772 ARG1P05089 322 aa12.84□□□□□ -0.35
ATG4B-203ENST00000400772 HCKP08631 526 aa12.84□□□□□ -0.35
ATG4B-203ENST00000400772 ERP29P30040 261 aaKnown RBP12.84□□□□□ -0.35
ATG4B-203ENST00000400772 LGALS4P56470 323 aa12.84□□□□□ -0.35
ATG4B-203ENST00000400772 CDK5R1Q15078 307 aa12.84□□□□□ -0.35
ATG4B-203ENST00000400772 RCN1Q15293 331 aa12.84□□□□□ -0.35
ATG4B-203ENST00000400772 CCDC58Q4VC31 144 aa12.84□□□□□ -0.35
ATG4B-203ENST00000400772 TTC23Q5W5X9 447 aa12.84□□□□□ -0.35
ATG4B-203ENST00000400772 SLC35E4Q6ICL7 350 aa12.84□□□□□ -0.35
ATG4B-203ENST00000400772 RPL22L1Q6P5R6 122 aaKnown RBP12.84□□□□□ -0.35
ATG4B-203ENST00000400772 OR51A2Q8NGJ7 313 aa12.84□□□□□ -0.35
ATG4B-203ENST00000400772 OR13D1Q8NGV5 346 aa12.84□□□□□ -0.35
ATG4B-203ENST00000400772 TSEN15Q8WW01 171 aaKnown RBP12.84□□□□□ -0.35
ATG4B-203ENST00000400772 RHOFQ9HBH0 211 aa12.84□□□□□ -0.35
ATG4B-203ENST00000400772 NEK6Q9HC98 313 aa12.84□□□□□ -0.35
ATG4B-203ENST00000400772 EXOSC4Q9NPD3 245 aaKnown RBP12.84□□□□□ -0.35
ATG4B-203ENST00000400772 C8orf4Q9NR00 106 aa12.84□□□□□ -0.35
ATG4B-203ENST00000400772 GLS2Q9UI32 602 aa12.84□□□□□ -0.35
ATG4B-203ENST00000400772 DIMT1Q9UNQ2 313 aaKnown RBP12.84□□□□□ -0.35
ATG4B-203ENST00000400772 VGLL3A8MV65 326 aa12.83□□□□□ -0.36
ATG4B-203ENST00000400772 OGG1O15527 345 aa12.83□□□□□ -0.36
ATG4B-203ENST00000400772 LALBAP00709 142 aa12.83□□□□□ -0.36
ATG4B-203ENST00000400772 TMEM225BP0DP42 221 aa12.83□□□□□ -0.36
ATG4B-203ENST00000400772 SOX2P48431 317 aa12.83□□□□□ -0.36
ATG4B-203ENST00000400772 P2RX3P56373 397 aa12.83□□□□□ -0.36
ATG4B-203ENST00000400772 ZNF626Q68DY1 528 aa12.83□□□□□ -0.36
ATG4B-203ENST00000400772 LAIR2Q6ISS4 152 aa12.83□□□□□ -0.36
ATG4B-203ENST00000400772 BRICD5Q6PL45 260 aa12.83□□□□□ -0.36
ATG4B-203ENST00000400772 TREML4Q6UXN2 200 aa12.83□□□□□ -0.36
ATG4B-203ENST00000400772 DHRSXQ8N5I4 330 aa12.83□□□□□ -0.36
ATG4B-203ENST00000400772 GGHQ92820 318 aa12.83□□□□□ -0.36
ATG4B-203ENST00000400772 BABAM2Q9NXR7 383 aa12.83□□□□□ -0.36
ATG4B-203ENST00000400772 TAS2R4Q9NYW5 299 aa12.83□□□□□ -0.36
ATG4B-203ENST00000400772 SESN1Q9Y6P5 492 aa12.83□□□□□ -0.36
ATG4B-203ENST00000400772 MGAM2Q2M2H8 2515 aa12.83□□□□□ -0.36
ATG4B-203ENST00000400772 ANKRD65E5RJM6 399 aa12.82□□□□□ -0.36
ATG4B-203ENST00000400772 SLC33A1O00400 549 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-203ENST00000400772 RAB3AP20336 220 aa12.82□□□□□ -0.36
ATG4B-203ENST00000400772 RAB13P51153 203 aa12.82□□□□□ -0.36
ATG4B-203ENST00000400772 AESQ08117 197 aa12.82□□□□□ -0.36
ATG4B-203ENST00000400772 OGFRL1Q5TC84 451 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-203ENST00000400772 BAIAP2L2Q6UXY1 529 aa12.82□□□□□ -0.36
ATG4B-203ENST00000400772 TMPRSS11AQ6ZMR5 421 aa12.82□□□□□ -0.36
ATG4B-203ENST00000400772 ZNF485Q8NCK3 441 aa12.82□□□□□ -0.36
ATG4B-203ENST00000400772 PXT1Q8NFP0 134 aa12.82□□□□□ -0.36
ATG4B-203ENST00000400772 GPR148Q8TDV2 347 aa12.82□□□□□ -0.36
ATG4B-203ENST00000400772 CORO2AQ92828 525 aa12.82□□□□□ -0.36
ATG4B-203ENST00000400772 MALSU1Q96EH3 234 aa12.82□□□□□ -0.36
ATG4B-203ENST00000400772 TMEM80Q96HE8 168 aa12.82□□□□□ -0.36
ATG4B-203ENST00000400772 FBLN5Q9UBX5 448 aa12.82□□□□□ -0.36
ATG4B-203ENST00000400772 UBE2J1Q9Y385 318 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-203ENST00000400772 TBL2Q9Y4P3 447 aaKnown RBP12.82□□□□□ -0.36
ATG4B-203ENST00000400772 IGHV2-26A0A0B4J1V2 119 aa12.81□□□□□ -0.36
ATG4B-203ENST00000400772 IRGMA1A4Y4 181 aa12.81□□□□□ -0.36
ATG4B-203ENST00000400772 GABRPO00591 440 aa12.81□□□□□ -0.36
ATG4B-203ENST00000400772 CASQ2O14958 399 aaPredicted RBP12.81□□□□□ -0.36
ATG4B-203ENST00000400772 DEGS1O15121 323 aa12.81□□□□□ -0.36
ATG4B-203ENST00000400772 CHST1O43916 411 aa12.81□□□□□ -0.36
ATG4B-203ENST00000400772 GNAO1P09471 354 aa12.81□□□□□ -0.36
ATG4B-203ENST00000400772 ZNF44P15621 663 aa12.81□□□□□ -0.36
ATG4B-203ENST00000400772 GLIPR1P48060 266 aa12.81□□□□□ -0.36
ATG4B-203ENST00000400772 SCN1BQ07699 218 aa12.81□□□□□ -0.36
ATG4B-203ENST00000400772 SSX2Q16385 188 aa12.81□□□□□ -0.36
ATG4B-203ENST00000400772 PLA1AQ53H76 456 aa12.81□□□□□ -0.36
ATG4B-203ENST00000400772 ELP2Q6IA86 826 aa12.81□□□□□ -0.36
ATG4B-203ENST00000400772 CCBE1Q6UXH8 406 aaPredicted RBP12.81□□□□□ -0.36
ATG4B-203ENST00000400772 ASCL4Q6XD76 172 aa12.81□□□□□ -0.36
ATG4B-203ENST00000400772 SETD9Q8NE22 299 aa12.81□□□□□ -0.36
ATG4B-203ENST00000400772 COQ2Q96H96 371 aa12.81□□□□□ -0.36
ATG4B-203ENST00000400772 NKX3-1Q99801 234 aaPredicted RBP12.81□□□□□ -0.36
ATG4B-203ENST00000400772 SIGLEC9Q9Y336 463 aa12.81□□□□□ -0.36
ATG4B-203ENST00000400772 EXOSC1Q9Y3B2 195 aaKnown RBP12.81□□□□□ -0.36
ATG4B-203ENST00000400772 KIAA2026Q5HYC2 2103 aa12.8□□□□□ -0.36
ATG4B-203ENST00000400772 ALDOBP05062 364 aa12.8□□□□□ -0.36
ATG4B-203ENST00000400772 CSN2P05814 226 aa12.8□□□□□ -0.36
ATG4B-203ENST00000400772 JUNBP17275 347 aaPredicted RBP12.8□□□□□ -0.36
ATG4B-203ENST00000400772 GDNFP39905 211 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms