RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 IL36GQ9NZH8 169 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 NPAP1Q9NZP6 1156 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 DNAJC15Q9Y5T4 150 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 A0A1W2PR48 441 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 GUCA2AQ02747 115 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 RIGQ13278 110 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 DUX5Q96PT3 197 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 GABRG3Q99928 467 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 TMEM38BQ9NVV0 291 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 FUT9Q9Y231 359 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 ST3GAL6Q9Y274 331 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 MYH2Q9UKX2 1941 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 PSG5Q15238 335 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 TMEM136Q6ZRR5 245 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 SPOCK3Q9BQ16 436 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 PRR13Q9NZ81 148 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 MRPS16Q9Y3D3 137 aaKnown RBP9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 SPTY2D1-AS1A0A0U1RR47 76 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 SHISA8B8ZZ34 492 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 NPFFO15130 113 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 NKX2-2O95096 273 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 MDKP21741 143 aaPredicted RBP9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 ARRB2P32121 409 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 SLC38A11Q08AI6 406 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 ZNF658BQ4V348 819 aaPredicted RBP9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 LHX8Q68G74 356 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 OR4D9Q8NGE8 314 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 MVB12AQ96EY5 273 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 CCL27Q9Y4X3 112 aa9.92□□□□□ -0.82
CACNA1C-217ENST00000399641 RBFOX2O43251 390 aaKnown RBP eCLIP9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 NAT1P18440 290 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 SLC35D3Q5M8T2 416 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 OR1L8Q8NGR8 309 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 Q8WTZ3 238 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 SSMEM1Q8WWF3 244 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 LRP6O75581 1613 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 A0A1W2PPC1 479 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 TAAR5O14804 337 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 ST8SIA5O15466 376 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 HOXA3O43365 443 aaPredicted RBP9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 GPR6P46095 362 aaPredicted RBP9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 SPATA45Q537H7 98 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 LIAT1Q6ZQX7 453 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 SNRNP40Q96DI7 357 aaKnown RBP9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 LHX9Q9NQ69 397 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 LRP10Q7Z4F1 713 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 WDTC1Q8N5D0 677 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 HAPLN2Q9GZV7 340 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 C7orf72A4D263 438 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 ISLRO14498 428 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 ARG1P05089 322 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 SLC37A1P57057 533 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 RPS4XP62701 263 aaKnown RBP9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 AANATQ16613 207 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 DNASE2BQ8WZ79 361 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 MED30Q96HR3 178 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 PCGF1Q9BSM1 259 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 FLRT3Q9NZU0 649 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 GMPR2Q9P2T1 348 aaKnown RBP9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 C19orf53Q9UNZ5 99 aaPredicted RBP9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 CXCL10P02778 98 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 PRB1P04280 392 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 OR2T7P0C7T2 308 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 ZNF56Q15929 161 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 TM4SF20Q53R12 229 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 SFTA2Q6UW10 78 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 GBGT1Q8N5D6 347 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 FAM89BQ8N5H3 189 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 OR5AN1Q8NGI8 311 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 MOKQ9UQ07 419 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 ETV7Q9Y603 341 aa9.91□□□□□ -0.82
CACNA1C-217ENST00000399641 ICOSLGO75144 302 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 CD99P14209 185 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 BTG2P78543 158 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 DLK1P80370 383 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 CIRBPQ14011 172 aaKnown RBP9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 EBLN2Q6P2I7 272 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 PAQR6Q6TCH4 344 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 GATA6Q92908 595 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 MARVELD3Q96A59 401 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 NTNG2Q96CW9 530 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 TCHHQ07283 1943 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 TRBV7-9A0A0J9YWB2 115 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 SP9P0CG40 484 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 HIST1H1CP16403 213 aaKnown RBP9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 ZNF117Q03924 483 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 METRNLQ641Q3 311 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 TMEM81Q6P7N7 255 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 GDF7Q7Z4P5 450 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 LOXL4Q96JB6 756 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 RHOVQ96L33 236 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 RPP25Q9BUL9 199 aaKnown RBP9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 PPM1DO15297 605 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 SRSF10O75494 262 aaKnown RBP9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 TYMSP04818 313 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 PSMB6P28072 239 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 FUT7Q11130 342 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 LCN8Q6JVE9 175 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 C16orf82Q7Z2V1 217 aa9.9□□□□□ -0.82
CACNA1C-217ENST00000399641 C16orf92Q96LL3 132 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms