RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 ESCO2Q56NI9 601 aa10.28□□□□□ -0.76
HLA-DQB1-203ENST00000399082 NLRC3Q7RTR2 1065 aa10.28□□□□□ -0.76
HLA-DQB1-203ENST00000399082 SLC36A1Q7Z2H8 476 aa10.28□□□□□ -0.76
HLA-DQB1-203ENST00000399082 BIVMQ86UB2 503 aa10.28□□□□□ -0.76
HLA-DQB1-203ENST00000399082 RTN4RL2Q86UN3 420 aa10.28□□□□□ -0.76
HLA-DQB1-203ENST00000399082 TPRA1Q86W33 373 aa10.28□□□□□ -0.76
HLA-DQB1-203ENST00000399082 LINC01356Q8N9X3 169 aa10.28□□□□□ -0.76
HLA-DQB1-203ENST00000399082 OR51D1Q8NGF3 324 aa10.28□□□□□ -0.76
HLA-DQB1-203ENST00000399082 FAM46BQ96A09 425 aa10.28□□□□□ -0.76
HLA-DQB1-203ENST00000399082 Q96M66 194 aa10.28□□□□□ -0.76
HLA-DQB1-203ENST00000399082 SHARPINQ9H0F6 387 aa10.28□□□□□ -0.76
HLA-DQB1-203ENST00000399082 PLGRKTQ9HBL7 147 aa10.28□□□□□ -0.76
HLA-DQB1-203ENST00000399082 MMP26Q9NRE1 261 aa10.28□□□□□ -0.76
HLA-DQB1-203ENST00000399082 GHRLQ9UBU3 117 aa10.28□□□□□ -0.76
HLA-DQB1-203ENST00000399082 CLN8Q9UBY8 286 aa10.28□□□□□ -0.76
HLA-DQB1-203ENST00000399082 STEAP1Q9UHE8 339 aa10.28□□□□□ -0.76
HLA-DQB1-203ENST00000399082 SCOCQ9UIL1 159 aa10.28□□□□□ -0.76
HLA-DQB1-203ENST00000399082 DSCAML1Q8TD84 2053 aa10.27□□□□□ -0.76
HLA-DQB1-203ENST00000399082 A0A0A6YYD4 124 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 TRAV24A0A0B4J272 114 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 K7N7A8 449 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 SIRPB1O00241 398 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 SLC33A1O00400 549 aaPredicted RBP10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 GEMIN2O14893 280 aaKnown RBP10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 ZNF780AO75290 641 aaPredicted RBP10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 BPNT1O95861 308 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 TK1P04183 234 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 HEXAP06865 529 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 UBBP0CG47 229 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 MGMTP16455 207 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 RPS19P39019 145 aaKnown RBP10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 OR3A1P47881 315 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 BMXP51813 675 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 CYB5R2Q6BCY4 276 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 SIGIRRQ6IA17 410 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 SFXN4Q6P4A7 337 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 ZNF561Q8N587 486 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 TMEM185AQ8NFB2 350 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 OR4S1Q8NGB4 309 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 ST8SIA4Q92187 359 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 FAM3DQ96BQ1 224 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 MED30Q96HR3 178 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 S100A13Q99584 98 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 BARHL1Q9BZE3 327 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 SLC25A10Q9UBX3 287 aaPredicted RBP10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 FBLN5Q9UBX5 448 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 ST3GAL6Q9Y274 331 aa10.27□□□□□ -0.77
HLA-DQB1-203ENST00000399082 TEP1Q99973 2627 aaKnown RBP10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 IGHV2-70DA0A0C4DH43 119 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 TMEM272A0A1B0GTI8 110 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 SH2D1BO14796 132 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 NDUFB3O43676 98 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 FOXH1O75593 365 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 CRTAPO75718 401 aaPredicted RBP10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 MPIG6BO95866 241 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 TGFAP01135 160 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 CSTBP04080 98 aaKnown RBP10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 CHRM2P08172 466 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 GTF2F2P13984 249 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 NPY4RP50391 375 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 PSMD7P51665 324 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 EFNB2P52799 333 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 DVL1P1P54792 670 aaPredicted RBP10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 GPR176Q14439 515 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 TAF9Q16594 264 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 C2orf76Q3KRA6 126 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 FIP1L1Q6UN15 594 aaKnown RBP10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 BTN2A1Q7KYR7 527 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 CLVS1Q8IUQ0 354 aaPredicted RBP10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 ASCC1Q8N9N2 400 aaKnown RBP10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 LY6G5BQ8NDX9 201 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 NDNFQ8TB73 568 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 TMEM186Q96B77 213 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 MRPS24Q96EL2 167 aaKnown RBP10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 SNX22Q96L94 193 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 NICN1Q9BSH3 213 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 DCTN5Q9BTE1 182 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 TM2D1Q9BX74 207 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 SELENOIQ9C0D9 397 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 CHST6Q9GZX3 395 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 RBM38Q9H0Z9 239 aaKnown RBP10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 LPAR5Q9H1C0 372 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 IFT22Q9H7X7 185 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 LIN7BQ9HAP6 207 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 C19orf12Q9NSK7 152 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 HIF1ANQ9NWT6 349 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 RCC2Q9P258 522 aaKnown RBP10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 OR5V1Q9UGF6 321 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 CEPT1Q9Y6K0 416 aa10.26□□□□□ -0.77
HLA-DQB1-203ENST00000399082 WNK2Q9Y3S1 2297 aa10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 LOC105371242A0A075B767 164 aa10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 PPIAL4CA0A0B4J2A2 164 aa10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 FOXI3A8MTJ6 420 aaPredicted RBP10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 PAHP00439 452 aa10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 IL1AP01583 271 aa10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 SNRPBP14678 240 aaKnown RBP10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 ZNF44P15621 663 aa10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 ARSBP15848 533 aa10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 SERPINB10P48595 397 aa10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 CAPZA1P52907 286 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms