RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 PAX6P26367 422 aa10.87□□□□□ -0.67
VCX3A-202ENST00000398729 LPCAT4Q643R3 524 aa10.87□□□□□ -0.67
VCX3A-202ENST00000398729 ZNF626Q68DY1 528 aa10.87□□□□□ -0.67
VCX3A-202ENST00000398729 LIAT1Q6ZQX7 453 aa10.87□□□□□ -0.67
VCX3A-202ENST00000398729 TCF23Q7RTU1 214 aa10.87□□□□□ -0.67
VCX3A-202ENST00000398729 LHFPL4Q7Z7J7 247 aa10.87□□□□□ -0.67
VCX3A-202ENST00000398729 SAXO1Q8IYX7 474 aa10.87□□□□□ -0.67
VCX3A-202ENST00000398729 PARP16Q8N5Y8 322 aa10.87□□□□□ -0.67
VCX3A-202ENST00000398729 TPRX1Q8N7U7 411 aa10.87□□□□□ -0.67
VCX3A-202ENST00000398729 OR4S1Q8NGB4 309 aa10.87□□□□□ -0.67
VCX3A-202ENST00000398729 OR11H6Q8NGC7 330 aa10.87□□□□□ -0.67
VCX3A-202ENST00000398729 TSEN15Q8WW01 171 aaKnown RBP10.87□□□□□ -0.67
VCX3A-202ENST00000398729 APH1BQ8WW43 257 aa10.87□□□□□ -0.67
VCX3A-202ENST00000398729 TCF7L1Q9HCS4 588 aa10.87□□□□□ -0.67
VCX3A-202ENST00000398729 FBLN5Q9UBX5 448 aa10.87□□□□□ -0.67
VCX3A-202ENST00000398729 DHDHQ9UQ10 334 aa10.87□□□□□ -0.67
VCX3A-202ENST00000398729 ZNF281Q9Y2X9 895 aa10.87□□□□□ -0.67
VCX3A-202ENST00000398729 FUOMA2VDF0 154 aa10.86□□□□□ -0.67
VCX3A-202ENST00000398729 VGLL3A8MV65 326 aa10.86□□□□□ -0.67
VCX3A-202ENST00000398729 ODF3BA8MYP8 253 aa10.86□□□□□ -0.67
VCX3A-202ENST00000398729 E9PI62 339 aa10.86□□□□□ -0.67
VCX3A-202ENST00000398729 SIRPB1O00241 398 aa10.86□□□□□ -0.67
VCX3A-202ENST00000398729 SULT1B1O43704 296 aa10.86□□□□□ -0.67
VCX3A-202ENST00000398729 ALX3O95076 343 aa10.86□□□□□ -0.67
VCX3A-202ENST00000398729 OR2H2O95918 312 aa10.86□□□□□ -0.67
VCX3A-202ENST00000398729 TMEM225BP0DP42 221 aa10.86□□□□□ -0.67
VCX3A-202ENST00000398729 ERP29P30040 261 aaKnown RBP10.86□□□□□ -0.67
VCX3A-202ENST00000398729 GABRA5P31644 462 aa10.86□□□□□ -0.67
VCX3A-202ENST00000398729 OR3A1P47881 315 aa10.86□□□□□ -0.67
VCX3A-202ENST00000398729 P2RX3P56373 397 aa10.86□□□□□ -0.67
VCX3A-202ENST00000398729 DYNC1I2Q13409 638 aaKnown RBP10.86□□□□□ -0.67
VCX3A-202ENST00000398729 KISS1Q15726 138 aa10.86□□□□□ -0.67
VCX3A-202ENST00000398729 TRAPPC6BQ86SZ2 158 aa10.86□□□□□ -0.67
VCX3A-202ENST00000398729 DTX3Q8N9I9 347 aa10.86□□□□□ -0.67
VCX3A-202ENST00000398729 OR4C13Q8NGP0 309 aa10.86□□□□□ -0.67
VCX3A-202ENST00000398729 MALSU1Q96EH3 234 aa10.86□□□□□ -0.67
VCX3A-202ENST00000398729 CPNE2Q96FN4 548 aaPredicted RBP10.86□□□□□ -0.67
VCX3A-202ENST00000398729 JAM3Q9BX67 310 aa10.86□□□□□ -0.67
VCX3A-202ENST00000398729 RANBP3Q9H6Z4 567 aaPredicted RBP10.86□□□□□ -0.67
VCX3A-202ENST00000398729 FGF20Q9NP95 211 aaPredicted RBP10.86□□□□□ -0.67
VCX3A-202ENST00000398729 ABCB10Q9NRK6 738 aa10.86□□□□□ -0.67
VCX3A-202ENST00000398729 UBE2J1Q9Y385 318 aaPredicted RBP10.86□□□□□ -0.67
VCX3A-202ENST00000398729 IRGMA1A4Y4 181 aa10.85□□□□□ -0.67
VCX3A-202ENST00000398729 WBP4O75554 376 aaKnown RBP10.85□□□□□ -0.67
VCX3A-202ENST00000398729 LIMS3P0CW19 117 aa10.85□□□□□ -0.67
VCX3A-202ENST00000398729 LIMS4P0CW20 117 aa10.85□□□□□ -0.67
VCX3A-202ENST00000398729 ZNF44P15621 663 aa10.85□□□□□ -0.67
VCX3A-202ENST00000398729 LMO1P25800 156 aa10.85□□□□□ -0.67
VCX3A-202ENST00000398729 DCKP27707 260 aa10.85□□□□□ -0.67
VCX3A-202ENST00000398729 KIR2DS4P43632 304 aa10.85□□□□□ -0.67
VCX3A-202ENST00000398729 FAM189A2Q15884 450 aa10.85□□□□□ -0.67
VCX3A-202ENST00000398729 SSX2Q16385 188 aa10.85□□□□□ -0.67
VCX3A-202ENST00000398729 SMN1Q16637 294 aaKnown RBP10.85□□□□□ -0.67
VCX3A-202ENST00000398729 PLA1AQ53H76 456 aa10.85□□□□□ -0.67
VCX3A-202ENST00000398729 ASPHD2Q6ICH7 369 aa10.85□□□□□ -0.67
VCX3A-202ENST00000398729 C11orf88Q6PI97 169 aa10.85□□□□□ -0.67
VCX3A-202ENST00000398729 CRIP3Q6Q6R5 217 aa10.85□□□□□ -0.67
VCX3A-202ENST00000398729 TMPRSS11AQ6ZMR5 421 aa10.85□□□□□ -0.67
VCX3A-202ENST00000398729 RNF144BQ7Z419 303 aa10.85□□□□□ -0.67
VCX3A-202ENST00000398729 DYNAPQ8N1N2 210 aa10.85□□□□□ -0.67
VCX3A-202ENST00000398729 PIFOQ8TCI5 191 aa10.85□□□□□ -0.67
VCX3A-202ENST00000398729 NPFFR1Q9GZQ6 430 aa10.85□□□□□ -0.67
VCX3A-202ENST00000398729 MMP27Q9H306 513 aa10.85□□□□□ -0.67
VCX3A-202ENST00000398729 C8orf4Q9NR00 106 aa10.85□□□□□ -0.67
VCX3A-202ENST00000398729 SESN1Q9Y6P5 492 aa10.85□□□□□ -0.67
VCX3A-202ENST00000398729 TRGV10A0A0A0MS01 117 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 IGHV2-26A0A0B4J1V2 119 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 MAGEB3O15480 346 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 CD2P06729 351 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 RAB3AP20336 220 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 GTF2A1P52655 376 aaPredicted RBP10.84□□□□□ -0.67
VCX3A-202ENST00000398729 ZP1P60852 638 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 SCN1BQ07699 218 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 LRRC36Q1X8D7 754 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 CCDC58Q4VC31 144 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 MINOS1Q5TGZ0 78 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 ZNF691Q5VV52 312 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 TTC23Q5W5X9 447 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 RPL22L1Q6P5R6 122 aaKnown RBP10.84□□□□□ -0.67
VCX3A-202ENST00000398729 CHST4Q8NCG5 386 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 OR2T6Q8NHC8 308 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 CNIH3Q8TBE1 160 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 RPS4Y2Q8TD47 263 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 GPR148Q8TDV2 347 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 CYGBQ8WWM9 190 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 CDCA4Q9BXL8 241 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 CLEC7AQ9BXN2 247 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 TMEM133Q9H2Q1 129 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 GAL3ST2Q9H3Q3 398 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 TCF19Q9Y242 345 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 MINOS1-NBL1R4GNA1 71 aa10.84□□□□□ -0.67
VCX3A-202ENST00000398729 DEGS1O15121 323 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 CHST1O43916 411 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 CLIC3O95833 236 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 CSN2P05814 226 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 MYL12AP19105 171 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 SOX2P48431 317 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 MTNR1BP49286 362 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 ETV1P50549 477 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 RAB13P51153 203 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms