RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 AGBL5Q8NDL9 886 aa11.55□□□□□ -0.56
TRIM40-207ENST00000396581 SGK3Q96BR1 496 aa11.55□□□□□ -0.56
TRIM40-207ENST00000396581 UNKLQ9H9P5 680 aaKnown RBP11.55□□□□□ -0.56
TRIM40-207ENST00000396581 IGKV1-27A0A075B6S5 117 aa11.54□□□□□ -0.56
TRIM40-207ENST00000396581 ZFAND5O76080 213 aa11.54□□□□□ -0.56
TRIM40-207ENST00000396581 CDS2O95674 445 aa11.54□□□□□ -0.56
TRIM40-207ENST00000396581 OR13C7P0DN81 318 aa11.54□□□□□ -0.56
TRIM40-207ENST00000396581 CRYGSP22914 178 aa11.54□□□□□ -0.56
TRIM40-207ENST00000396581 OPRM1P35372 400 aa11.54□□□□□ -0.56
TRIM40-207ENST00000396581 CDX1P47902 265 aaPredicted RBP11.54□□□□□ -0.56
TRIM40-207ENST00000396581 ZNF266Q14584 549 aa11.54□□□□□ -0.56
TRIM40-207ENST00000396581 SNAI3Q3KNW1 292 aa11.54□□□□□ -0.56
TRIM40-207ENST00000396581 TMEM123Q8N131 208 aa11.54□□□□□ -0.56
TRIM40-207ENST00000396581 FBXL14Q8N1E6 418 aa11.54□□□□□ -0.56
TRIM40-207ENST00000396581 SUMF2Q8NBJ7 301 aa11.54□□□□□ -0.56
TRIM40-207ENST00000396581 GGACTQ9BVM4 153 aa11.54□□□□□ -0.56
TRIM40-207ENST00000396581 TOLLIPQ9H0E2 274 aa11.54□□□□□ -0.56
TRIM40-207ENST00000396581 IL36GQ9NZH8 169 aa11.54□□□□□ -0.56
TRIM40-207ENST00000396581 ZNF581Q9P0T4 197 aa11.54□□□□□ -0.56
TRIM40-207ENST00000396581 NXT1Q9UKK6 140 aaKnown RBP11.54□□□□□ -0.56
TRIM40-207ENST00000396581 RBFOX3A6NFN3 312 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 ZNF729A6NN14 1252 aaPredicted RBP11.53□□□□□ -0.56
TRIM40-207ENST00000396581 WRBO00258 174 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 DHHO43323 396 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 PITX3O75364 302 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 SFTPDP35247 375 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 RSU1Q15404 277 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 OR8B8Q15620 311 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 TSPO2Q5TGU0 170 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 FAM69BQ5VUD6 431 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 TMEM42Q69YG0 159 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 TMEM182Q6ZP80 229 aaPredicted RBP11.53□□□□□ -0.56
TRIM40-207ENST00000396581 OR2C3Q8N628 320 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 FAM213BQ8TBF2 198 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 ABHD14BQ96IU4 210 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 RARRES2Q99969 163 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 BCL2L14Q9BZR8 327 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 GPR173Q9NS66 373 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 KIAA1456Q9P272 454 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 FOXD3Q9UJU5 478 aaPredicted RBP11.53□□□□□ -0.56
TRIM40-207ENST00000396581 PTRH2Q9Y3E5 179 aaKnown RBP11.53□□□□□ -0.56
TRIM40-207ENST00000396581 IFITM10A6NMD0 228 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 ANGPTL7O43827 346 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 OR2J2O76002 312 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 DBHP09172 617 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 GNMTQ14749 295 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 PHLDA2Q53GA4 152 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 CPEB2Q7Z5Q1 589 aaKnown RBP11.53□□□□□ -0.56
TRIM40-207ENST00000396581 CCDC71LQ8N9Z2 235 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 OR10AD1Q8NGE0 317 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 MR1Q95460 341 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 SPTSSAQ969W0 71 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 SPACA9Q96E40 222 aaPredicted RBP11.53□□□□□ -0.56
TRIM40-207ENST00000396581 PLSCR2Q9NRY7 297 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 R4GN57 208 aa11.53□□□□□ -0.56
TRIM40-207ENST00000396581 NCOA6Q14686 2063 aaPredicted RBP11.52□□□□□ -0.56
TRIM40-207ENST00000396581 CXorf65A6NEN9 183 aa11.52□□□□□ -0.57
TRIM40-207ENST00000396581 HSD17B6O14756 317 aa11.52□□□□□ -0.57
TRIM40-207ENST00000396581 SRP19P09132 144 aaKnown RBP11.52□□□□□ -0.57
TRIM40-207ENST00000396581 ATP6V0CP27449 155 aa11.52□□□□□ -0.57
TRIM40-207ENST00000396581 RAB2AP61019 212 aa11.52□□□□□ -0.57
TRIM40-207ENST00000396581 CNN3Q15417 329 aaKnown RBP11.52□□□□□ -0.57
TRIM40-207ENST00000396581 EXT1Q16394 746 aa11.52□□□□□ -0.57
TRIM40-207ENST00000396581 NCMAPQ5T1S8 102 aa11.52□□□□□ -0.57
TRIM40-207ENST00000396581 FAM27BQ5VT28 67 aa11.52□□□□□ -0.57
TRIM40-207ENST00000396581 LHFPL2Q6ZUX7 228 aa11.52□□□□□ -0.57
TRIM40-207ENST00000396581 SLC35G3Q8N808 338 aa11.52□□□□□ -0.57
TRIM40-207ENST00000396581 OR5L1Q8NGL2 311 aa11.52□□□□□ -0.57
TRIM40-207ENST00000396581 INTS12Q96CB8 462 aaKnown RBP11.52□□□□□ -0.57
TRIM40-207ENST00000396581 REEP6Q96HR9 211 aa11.52□□□□□ -0.57
TRIM40-207ENST00000396581 ZNF286AQ9HBT8 521 aa11.52□□□□□ -0.57
TRIM40-207ENST00000396581 CHCHD2Q9Y6H1 151 aaPredicted RBP11.52□□□□□ -0.57
TRIM40-207ENST00000396581 WDFY3Q8IZQ1 3526 aa11.52□□□□□ -0.57
TRIM40-207ENST00000396581 A0A087WZY1 265 aa11.51□□□□□ -0.57
TRIM40-207ENST00000396581 ZNF732B4DXR9 585 aa11.51□□□□□ -0.57
TRIM40-207ENST00000396581 TRDCB7Z8K6 153 aa11.51□□□□□ -0.57
TRIM40-207ENST00000396581 CDX4O14627 284 aaPredicted RBP11.51□□□□□ -0.57
TRIM40-207ENST00000396581 PHF1O43189 567 aaPredicted RBP11.51□□□□□ -0.57
TRIM40-207ENST00000396581 GALR2O43603 387 aaPredicted RBP11.51□□□□□ -0.57
TRIM40-207ENST00000396581 SPRY1O43609 319 aaPredicted RBP11.51□□□□□ -0.57
TRIM40-207ENST00000396581 GDF9O60383 454 aa11.51□□□□□ -0.57
TRIM40-207ENST00000396581 VAMP5O95183 116 aa11.51□□□□□ -0.57
TRIM40-207ENST00000396581 FXYD4P59646 89 aa11.51□□□□□ -0.57
TRIM40-207ENST00000396581 SRPXP78539 464 aa11.51□□□□□ -0.57
TRIM40-207ENST00000396581 CCL20P78556 96 aa11.51□□□□□ -0.57
TRIM40-207ENST00000396581 KRTAP27-1Q3LI81 207 aa11.51□□□□□ -0.57
TRIM40-207ENST00000396581 MRPL14Q6P1L8 145 aaKnown RBP11.51□□□□□ -0.57
TRIM40-207ENST00000396581 SLC22A25Q6T423 547 aa11.51□□□□□ -0.57
TRIM40-207ENST00000396581 Q6ZPA2 131 aa11.51□□□□□ -0.57
TRIM40-207ENST00000396581 FAM185AQ8N0U4 392 aa11.51□□□□□ -0.57
TRIM40-207ENST00000396581 OR11L1Q8NGX0 322 aa11.51□□□□□ -0.57
TRIM40-207ENST00000396581 OR14L1PQ8NHC6 308 aa11.51□□□□□ -0.57
TRIM40-207ENST00000396581 POM121Q96HA1 1249 aa11.51□□□□□ -0.57
TRIM40-207ENST00000396581 TMEM56Q96MV1 263 aa11.51□□□□□ -0.57
TRIM40-207ENST00000396581 ZNF385AQ96PM9 386 aaKnown RBP11.51□□□□□ -0.57
TRIM40-207ENST00000396581 TP53RKQ96S44 253 aa11.51□□□□□ -0.57
TRIM40-207ENST00000396581 RASL10BQ96S79 203 aa11.51□□□□□ -0.57
TRIM40-207ENST00000396581 SPSB2Q99619 263 aa11.51□□□□□ -0.57
TRIM40-207ENST00000396581 PAPOLGQ9BWT3 736 aaKnown RBP11.51□□□□□ -0.57
TRIM40-207ENST00000396581 BCO1Q9HAY6 547 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms