RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 OR3A4PP47883 348 aa13.68□□□□□ -0.22
CXCL1-201ENST00000395761 CAPZA1P52907 286 aa13.68□□□□□ -0.22
CXCL1-201ENST00000395761 VBP1P61758 197 aa13.68□□□□□ -0.22
CXCL1-201ENST00000395761 NCS1P62166 190 aa13.68□□□□□ -0.22
CXCL1-201ENST00000395761 LSM3P62310 102 aaKnown RBP13.68□□□□□ -0.22
CXCL1-201ENST00000395761 COL10A1Q03692 680 aa13.68□□□□□ -0.22
CXCL1-201ENST00000395761 PRIMA1Q86XR5 153 aa13.68□□□□□ -0.22
CXCL1-201ENST00000395761 NKAIN3Q8N8D7 197 aa13.68□□□□□ -0.22
CXCL1-201ENST00000395761 LY6G5BQ8NDX9 201 aa13.68□□□□□ -0.22
CXCL1-201ENST00000395761 H1FXQ92522 213 aaKnown RBP13.68□□□□□ -0.22
CXCL1-201ENST00000395761 ISOC1Q96CN7 298 aa13.68□□□□□ -0.22
CXCL1-201ENST00000395761 HMG20AQ9NP66 347 aa13.68□□□□□ -0.22
CXCL1-201ENST00000395761 MXRA5Q9NR99 2828 aa13.68□□□□□ -0.22
CXCL1-201ENST00000395761 JMJD1CQ15652 2540 aa13.67□□□□□ -0.22
CXCL1-201ENST00000395761 NOL3O60936 208 aaKnown RBP13.67□□□□□ -0.22
CXCL1-201ENST00000395761 CDRT1O95170 752 aa13.67□□□□□ -0.22
CXCL1-201ENST00000395761 IL1AP01583 271 aa13.67□□□□□ -0.22
CXCL1-201ENST00000395761 SDC2P34741 201 aa13.67□□□□□ -0.22
CXCL1-201ENST00000395761 CAV3P56539 151 aa13.67□□□□□ -0.22
CXCL1-201ENST00000395761 FGF12P61328 243 aa13.67□□□□□ -0.22
CXCL1-201ENST00000395761 C11orf91Q3C1V1 193 aa13.67□□□□□ -0.22
CXCL1-201ENST00000395761 ZNF561Q8N587 486 aa13.67□□□□□ -0.22
CXCL1-201ENST00000395761 PXT1Q8NFP0 134 aa13.67□□□□□ -0.22
CXCL1-201ENST00000395761 OR10K1Q8NGX5 313 aa13.67□□□□□ -0.22
CXCL1-201ENST00000395761 FOXRED1Q96CU9 486 aaPredicted RBP13.67□□□□□ -0.22
CXCL1-201ENST00000395761 DCTN5Q9BTE1 182 aa13.67□□□□□ -0.22
CXCL1-201ENST00000395761 MRI1Q9BV20 369 aa13.67□□□□□ -0.22
CXCL1-201ENST00000395761 FAM192AQ9GZU8 254 aa13.67□□□□□ -0.22
CXCL1-201ENST00000395761 RSL24D1Q9UHA3 163 aaKnown RBP13.67□□□□□ -0.22
CXCL1-201ENST00000395761 TMEM82A0PJX8 343 aa13.66□□□□□ -0.22
CXCL1-201ENST00000395761 H3BMQ9 156 aa13.66□□□□□ -0.22
CXCL1-201ENST00000395761 GPR37O15354 613 aa13.66□□□□□ -0.22
CXCL1-201ENST00000395761 ZNF737O75373 536 aa13.66□□□□□ -0.22
CXCL1-201ENST00000395761 HAND1O96004 215 aa13.66□□□□□ -0.22
CXCL1-201ENST00000395761 FSHBP01225 129 aa13.66□□□□□ -0.22
CXCL1-201ENST00000395761 CHRM2P08172 466 aa13.66□□□□□ -0.22
CXCL1-201ENST00000395761 RAB3BP20337 219 aa13.66□□□□□ -0.22
CXCL1-201ENST00000395761 TGFBR1P36897 503 aa13.66□□□□□ -0.22
CXCL1-201ENST00000395761 PTGFRP43088 359 aa13.66□□□□□ -0.22
CXCL1-201ENST00000395761 ARF6P62330 175 aa13.66□□□□□ -0.22
CXCL1-201ENST00000395761 KLF17Q5JT82 389 aaPredicted RBP13.66□□□□□ -0.22
CXCL1-201ENST00000395761 GLT8D1Q68CQ7 371 aa13.66□□□□□ -0.22
CXCL1-201ENST00000395761 ASCL4Q6XD76 172 aa13.66□□□□□ -0.22
CXCL1-201ENST00000395761 USP43Q70EL4 1123 aa13.66□□□□□ -0.22
CXCL1-201ENST00000395761 PNLDC1Q8NA58 520 aaKnown RBP13.66□□□□□ -0.22
CXCL1-201ENST00000395761 NANPQ8TBE9 248 aa13.66□□□□□ -0.22
CXCL1-201ENST00000395761 CPNE2Q96FN4 548 aaPredicted RBP13.66□□□□□ -0.22
CXCL1-201ENST00000395761 GFI1Q99684 422 aa13.66□□□□□ -0.22
CXCL1-201ENST00000395761 CNTD2Q9H8S5 307 aa13.66□□□□□ -0.22
CXCL1-201ENST00000395761 ING4Q9UNL4 249 aa13.66□□□□□ -0.22
CXCL1-201ENST00000395761 V9GY05 133 aa13.66□□□□□ -0.22
CXCL1-201ENST00000395761 IGHV3OR16-10A0A075B7F0 116 aa13.65□□□□□ -0.22
CXCL1-201ENST00000395761 K7N7A8 449 aa13.65□□□□□ -0.22
CXCL1-201ENST00000395761 TK1P04183 234 aa13.65□□□□□ -0.22
CXCL1-201ENST00000395761 LIPFP07098 398 aa13.65□□□□□ -0.22
CXCL1-201ENST00000395761 PPIAL4GP0DN37 164 aa13.65□□□□□ -0.22
CXCL1-201ENST00000395761 CFPP27918 469 aa13.65□□□□□ -0.22
CXCL1-201ENST00000395761 RPS19P39019 145 aaKnown RBP13.65□□□□□ -0.22
CXCL1-201ENST00000395761 ZNF146Q15072 292 aa13.65□□□□□ -0.22
CXCL1-201ENST00000395761 PDCD1Q15116 288 aa13.65□□□□□ -0.22
CXCL1-201ENST00000395761 SPIN3Q5JUX0 258 aa13.65□□□□□ -0.22
CXCL1-201ENST00000395761 C1orf100Q5SVJ3 147 aa13.65□□□□□ -0.22
CXCL1-201ENST00000395761 FIP1L1Q6UN15 594 aaKnown RBP13.65□□□□□ -0.22
CXCL1-201ENST00000395761 ASCC1Q8N9N2 400 aaKnown RBP13.65□□□□□ -0.22
CXCL1-201ENST00000395761 C8orf46Q8TAG6 207 aa13.65□□□□□ -0.22
CXCL1-201ENST00000395761 UPRTQ96BW1 309 aa13.65□□□□□ -0.22
CXCL1-201ENST00000395761 UQCC2Q9BRT2 126 aa13.65□□□□□ -0.22
CXCL1-201ENST00000395761 SEBOXQ9HB31 216 aaPredicted RBP13.65□□□□□ -0.22
CXCL1-201ENST00000395761 C19orf12Q9NSK7 152 aa13.65□□□□□ -0.22
CXCL1-201ENST00000395761 AK6Q9Y3D8 172 aaKnown RBP13.65□□□□□ -0.22
CXCL1-201ENST00000395761 A0A0G2JK05 382 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 CCDC160A6NGH7 325 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 NOTOA8MTQ0 251 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 PSPNO60542 156 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 TMEM127O75204 238 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 HTR3BO95264 441 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 MMP9P14780 707 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 RANBP1P43487 201 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 SERPINB10P48595 397 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 RSU1Q15404 277 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 FOXB2Q5VYV0 432 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 ELP2Q6IA86 826 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 Q6P435 159 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 C17orf107Q6ZR85 190 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 NR2C2APQ86WQ0 139 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 JAGN1Q8N5M9 183 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 OR4M1Q8NGD0 313 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 WDFY2Q96P53 400 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 TBX15Q96SF7 602 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 PCGF1Q9BSM1 259 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 FAM234AQ9H0X4 552 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 SIRPDQ9H106 197 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 DCSTAMPQ9H295 470 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 RHOFQ9HBH0 211 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 ONECUT1Q9UBC0 465 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 CUBNO60494 3623 aa13.64□□□□□ -0.23
CXCL1-201ENST00000395761 SIRPB1O00241 398 aa13.63□□□□□ -0.23
CXCL1-201ENST00000395761 SH2D1BO14796 132 aa13.63□□□□□ -0.23
CXCL1-201ENST00000395761 TOX4O94842 621 aa13.63□□□□□ -0.23
CXCL1-201ENST00000395761 OR2H2O95918 312 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms