RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 ITLN1Q8WWA0 313 aa17.14■□□□□ 0.33
HDDC3-202ENST00000394272 NUDT15Q9NV35 164 aa17.14■□□□□ 0.33
HDDC3-202ENST00000394272 PLEKHA6Q9Y2H5 1048 aa17.14■□□□□ 0.33
HDDC3-202ENST00000394272 TRAV24A0A0B4J272 114 aa17.14■□□□□ 0.33
HDDC3-202ENST00000394272 A0A0B4J293 547 aa17.14■□□□□ 0.33
HDDC3-202ENST00000394272 UBE2QL1A1L167 161 aa17.14■□□□□ 0.33
HDDC3-202ENST00000394272 C1QL1O75973 258 aa17.14■□□□□ 0.33
HDDC3-202ENST00000394272 TBPP20226 339 aa17.14■□□□□ 0.33
HDDC3-202ENST00000394272 DTYMKP23919 212 aa17.14■□□□□ 0.33
HDDC3-202ENST00000394272 APOBEC3AP31941 199 aaPredicted RBP17.14■□□□□ 0.33
HDDC3-202ENST00000394272 SPIN3Q5JUX0 258 aa17.14■□□□□ 0.33
HDDC3-202ENST00000394272 BTN2A1Q7KYR7 527 aa17.14■□□□□ 0.33
HDDC3-202ENST00000394272 LILRB1Q8NHL6 650 aaPredicted RBP17.14■□□□□ 0.33
HDDC3-202ENST00000394272 WDR13Q9H1Z4 485 aa17.14■□□□□ 0.33
HDDC3-202ENST00000394272 hCG_1807616A0A1W2PRN6 198 aa17.13■□□□□ 0.33
HDDC3-202ENST00000394272 C17orf100A8MU93 164 aa17.13■□□□□ 0.33
HDDC3-202ENST00000394272 INMT-MINDY4F8WBC2 141 aa17.13■□□□□ 0.33
HDDC3-202ENST00000394272 WNT9BO14905 357 aa17.13■□□□□ 0.33
HDDC3-202ENST00000394272 HRH1P35367 487 aa17.13■□□□□ 0.33
HDDC3-202ENST00000394272 GMFBP60983 142 aa17.13■□□□□ 0.33
HDDC3-202ENST00000394272 TNFAIP6P98066 277 aaPredicted RBP17.13■□□□□ 0.33
HDDC3-202ENST00000394272 HOXA4Q00056 320 aaPredicted RBP17.13■□□□□ 0.33
HDDC3-202ENST00000394272 MEF2DQ14814 521 aa17.13■□□□□ 0.33
HDDC3-202ENST00000394272 EFNB3Q15768 340 aa17.13■□□□□ 0.33
HDDC3-202ENST00000394272 RSBN1Q5VWQ0 802 aaPredicted RBP17.13■□□□□ 0.33
HDDC3-202ENST00000394272 ZNF782Q6ZMW2 699 aaPredicted RBP17.13■□□□□ 0.33
HDDC3-202ENST00000394272 ACP7Q6ZNF0 438 aa17.13■□□□□ 0.33
HDDC3-202ENST00000394272 BEST4Q8NFU0 473 aa17.13■□□□□ 0.33
HDDC3-202ENST00000394272 OR51S1Q8NGJ8 323 aa17.13■□□□□ 0.33
HDDC3-202ENST00000394272 LRRC29Q8WV35 223 aa17.13■□□□□ 0.33
HDDC3-202ENST00000394272 DIRC2Q96SL1 478 aa17.13■□□□□ 0.33
HDDC3-202ENST00000394272 ST6GALNAC5Q9BVH7 336 aa17.13■□□□□ 0.33
HDDC3-202ENST00000394272 FN3KRPQ9HA64 309 aa17.13■□□□□ 0.33
HDDC3-202ENST00000394272 M0R233 179 aa17.12■□□□□ 0.33
HDDC3-202ENST00000394272 GLAP06280 429 aa17.12■□□□□ 0.33
HDDC3-202ENST00000394272 CD55P08174 381 aa17.12■□□□□ 0.33
HDDC3-202ENST00000394272 FCGR3AP08637 254 aa17.12■□□□□ 0.33
HDDC3-202ENST00000394272 GLRA1P23415 457 aa17.12■□□□□ 0.33
HDDC3-202ENST00000394272 TNFSF4P23510 183 aa17.12■□□□□ 0.33
HDDC3-202ENST00000394272 RNASE10Q5GAN6 216 aaKnown RBP17.12■□□□□ 0.33
HDDC3-202ENST00000394272 MOGAT3Q86VF5 341 aa17.12■□□□□ 0.33
HDDC3-202ENST00000394272 SUMF2Q8NBJ7 301 aa17.12■□□□□ 0.33
HDDC3-202ENST00000394272 OR4K15Q8NH41 348 aa17.12■□□□□ 0.33
HDDC3-202ENST00000394272 CHST6Q9GZX3 395 aa17.12■□□□□ 0.33
HDDC3-202ENST00000394272 ZNF701Q9NV72 531 aaPredicted RBP17.12■□□□□ 0.33
HDDC3-202ENST00000394272 CISD1Q9NZ45 108 aaKnown RBP17.12■□□□□ 0.33
HDDC3-202ENST00000394272 TRAV6A0A075B6T7 132 aa17.12■□□□□ 0.33
HDDC3-202ENST00000394272 SRRM5B3KS81 715 aa17.12■□□□□ 0.33
HDDC3-202ENST00000394272 DEGS1O15121 323 aa17.12■□□□□ 0.33
HDDC3-202ENST00000394272 NDUFB6O95139 128 aa17.12■□□□□ 0.33
HDDC3-202ENST00000394272 BTG1P62324 171 aa17.12■□□□□ 0.33
HDDC3-202ENST00000394272 MRPS15P82914 257 aaKnown RBP17.12■□□□□ 0.33
HDDC3-202ENST00000394272 MICBQ29980 383 aa17.12■□□□□ 0.33
HDDC3-202ENST00000394272 MST1LQ2TV78 715 aa17.12■□□□□ 0.33
HDDC3-202ENST00000394272 MAFIPQ8WZ33 124 aa17.12■□□□□ 0.33
HDDC3-202ENST00000394272 PIK3IP1Q96FE7 263 aa17.12■□□□□ 0.33
HDDC3-202ENST00000394272 SLC6A7Q99884 636 aa17.12■□□□□ 0.33
HDDC3-202ENST00000394272 C20orf85Q9H1P6 137 aa17.12■□□□□ 0.33
HDDC3-202ENST00000394272 C12orf4Q9NQ89 552 aa17.12■□□□□ 0.33
HDDC3-202ENST00000394272 EDARQ9UNE0 448 aa17.12■□□□□ 0.33
HDDC3-202ENST00000394272 IGKV1D-8A0A087WSZ0 117 aa17.11■□□□□ 0.33
HDDC3-202ENST00000394272 MCRIP1C9JLW8 97 aa17.11■□□□□ 0.33
HDDC3-202ENST00000394272 OR2H2O95918 312 aa17.11■□□□□ 0.33
HDDC3-202ENST00000394272 AMY2AP04746 511 aa17.11■□□□□ 0.33
HDDC3-202ENST00000394272 ZNF44P15621 663 aa17.11■□□□□ 0.33
HDDC3-202ENST00000394272 AMY2BP19961 511 aa17.11■□□□□ 0.33
HDDC3-202ENST00000394272 ZNF672Q499Z4 452 aaPredicted RBP17.11■□□□□ 0.33
HDDC3-202ENST00000394272 ACTBL2Q562R1 376 aa17.11■□□□□ 0.33
HDDC3-202ENST00000394272 VAX1Q5SQQ9 334 aa17.11■□□□□ 0.33
HDDC3-202ENST00000394272 FIP1L1Q6UN15 594 aaKnown RBP17.11■□□□□ 0.33
HDDC3-202ENST00000394272 Q6ZPA2 131 aa17.11■□□□□ 0.33
HDDC3-202ENST00000394272 BPIFB2Q8N4F0 458 aa17.11■□□□□ 0.33
HDDC3-202ENST00000394272 GCSAMQ8N6F7 178 aa17.11■□□□□ 0.33
HDDC3-202ENST00000394272 DHRS9Q9BPW9 319 aa17.11■□□□□ 0.33
HDDC3-202ENST00000394272 DPCDQ9BVM2 203 aaPredicted RBP17.11■□□□□ 0.33
HDDC3-202ENST00000394272 GCM1Q9NP62 436 aa17.11■□□□□ 0.33
HDDC3-202ENST00000394272 SLC2A8Q9NY64 477 aa17.11■□□□□ 0.33
HDDC3-202ENST00000394272 DYSFO75923 2080 aa17.11■□□□□ 0.33
HDDC3-202ENST00000394272 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.1■□□□□ 0.33
HDDC3-202ENST00000394272 HS3ST1O14792 307 aa17.1■□□□□ 0.33
HDDC3-202ENST00000394272 EGR1P18146 543 aa17.1■□□□□ 0.33
HDDC3-202ENST00000394272 RBMXP38159 391 aaKnown RBP17.1■□□□□ 0.33
HDDC3-202ENST00000394272 RAG2P55895 527 aa17.1■□□□□ 0.33
HDDC3-202ENST00000394272 RBMS2Q15434 407 aaKnown RBP17.1■□□□□ 0.33
HDDC3-202ENST00000394272 TATDN3Q17R31 274 aa17.1■□□□□ 0.33
HDDC3-202ENST00000394272 SMIM21Q3B7S5 101 aa17.1■□□□□ 0.33
HDDC3-202ENST00000394272 RDH5Q92781 318 aa17.1■□□□□ 0.33
HDDC3-202ENST00000394272 ERGIC1Q969X5 290 aa17.1■□□□□ 0.33
HDDC3-202ENST00000394272 RASL12Q9NYN1 266 aa17.1■□□□□ 0.33
HDDC3-202ENST00000394272 ZNF462Q96JM2 2506 aa17.1■□□□□ 0.33
HDDC3-202ENST00000394272 FAM221AA4D161 298 aa17.1■□□□□ 0.33
HDDC3-202ENST00000394272 B9A039 149 aa17.1■□□□□ 0.33
HDDC3-202ENST00000394272 SLC33A1O00400 549 aaPredicted RBP17.1■□□□□ 0.33
HDDC3-202ENST00000394272 HSPB6O14558 160 aa17.1■□□□□ 0.33
HDDC3-202ENST00000394272 SH2D1BO14796 132 aa17.1■□□□□ 0.33
HDDC3-202ENST00000394272 HAND1O96004 215 aa17.1■□□□□ 0.33
HDDC3-202ENST00000394272 NAPSAO96009 420 aa17.1■□□□□ 0.33
HDDC3-202ENST00000394272 KNG1P01042 644 aa17.1■□□□□ 0.33
HDDC3-202ENST00000394272 LHBP01229 141 aa17.1■□□□□ 0.33
HDDC3-202ENST00000394272 PMP2P02689 132 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms