RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 ST3GAL6Q9Y274 331 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 ZNF257Q9Y2Q1 563 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 COQ4Q9Y3A0 265 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 AK6Q9Y3D8 172 aaKnown RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 PHLDA3Q9Y5J5 127 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 N6AMT1Q9Y5N5 214 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 NPTNQ9Y639 398 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 COMMD3-BMI1R4GMX3 469 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 KIAA0100Q14667 2235 aaKnown RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 RELNP78509 3460 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 ZMYM6O95789 1325 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 PTPRJQ12913 1337 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 FRMPD4Q14CM0 1322 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 RFX7Q2KHR2 1363 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 NHSL1Q5SYE7 1610 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 NPC1L1Q9UHC9 1359 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 E9PCH4 1651 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 LYSTQ99698 3801 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 COL18A1P39060 1754 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 IGHV6-1A0A0B4J1U7 121 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 A0A0D9SEW6 157 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 ZNF816-ZNF321PA0A0X1KG74 233 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 A0A1W2PNV4 684 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 A0A1W2PQD3 144 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 TCRBV9S1A1TA0A576 114 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 XKRY2A2RUG3 117 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 FUOMA2VDF0 154 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 HTR3EA5X5Y0 456 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 METTL21EPA6NDL7 271 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 ANXA2P2A6NMY6 339 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 FAM25EA8MYX2 175 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 WASH3PC4AMC7 463 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 CCL21O00585 134 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 DYNC1I1O14576 645 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 TOR1AO14656 332 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 PHYHO14832 338 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 SLC30A4O14863 429 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 RGS16O15492 202 aaPredicted RBP-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 ATP8B1O43520 1251 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 DENRO43583 198 aaKnown RBP-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 KLRC4O43908 158 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 KALRNO60229 2985 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 NUPR1O60356 82 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 FCMRO60667 390 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 DNAJB6O75190 326 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 UGT2B11O75310 529 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 MYO1DO94832 1006 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 PSMG1O95456 288 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 C1orf105O95561 183 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 AP2A1O95782 977 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 IL1BP01584 269 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 S100BP04271 92 aaPredicted RBP-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 BPGMP07738 259 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 ANXA4P09525 319 aaPredicted RBP-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 OR4Q2P0C623 313 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 TRGC1P0CF51 173 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 IGHV3-30-3P0DP02 117 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 GNSP15586 552 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 FERP16591 822 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 FUT1P19526 365 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 PGCP20142 388 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 PTNP21246 168 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 BGNP21810 368 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 CD24P25063 80 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 U2AF2P26368 475 aaKnown RBP eCLIP-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 GRPRP30550 384 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 ALDH3A1P30838 453 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 ATP5C1P36542 298 aaKnown RBP-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 GNALP38405 381 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 IFNGR2P38484 337 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 GRIA1P42261 906 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 XCL1P47992 114 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 IFNAR2P48551 515 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 RND2P52198 227 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 FBXW4P57775 412 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 MLF1P58340 268 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 ACTR1AP61163 376 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 ARF3P61204 181 aaPredicted RBP-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 PSMC6P62333 389 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 RAB11AP62491 216 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 ARF1P84077 181 aaKnown RBP-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 HTD2P86397 168 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 MPP1Q00013 466 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 EIF3IQ13347 325 aaKnown RBP-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 APOFQ13790 326 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 ZNF846Q147U1 533 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 PDK4Q16654 411 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 DGUOKQ16854 277 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 TMEM241Q24JQ0 296 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 LINC00303Q3SY05 128 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 LINC01620Q4KN68 170 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 SPATA45Q537H7 98 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 FAM74A1Q5RGS3 127 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 JAKMIP3Q5VZ66 844 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 TPGS2Q68CL5 300 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 TMEM215Q68D42 235 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 TEX261Q6UWH6 196 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 LYZL1Q6UWQ5 148 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 DLEU7Q6UYE1 221 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 B3GLCTQ6Y288 498 aa-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms