RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 OR5C1Q8NGR4 320 aa12.09□□□□□ -0.47
SDC1-202ENST00000381150 OR14L1PQ8NHC6 308 aa12.09□□□□□ -0.47
SDC1-202ENST00000381150 TMEM37Q8WXS4 190 aa12.09□□□□□ -0.47
SDC1-202ENST00000381150 PECRQ9BY49 303 aa12.09□□□□□ -0.47
SDC1-202ENST00000381150 DUSP15Q9H1R2 295 aaPredicted RBP12.09□□□□□ -0.47
SDC1-202ENST00000381150 BCO1Q9HAY6 547 aa12.09□□□□□ -0.47
SDC1-202ENST00000381150 OR14J1Q9UGF5 321 aa12.09□□□□□ -0.47
SDC1-202ENST00000381150 MRPS17Q9Y2R5 130 aaKnown RBP12.09□□□□□ -0.47
SDC1-202ENST00000381150 DUX1O43812 170 aa12.09□□□□□ -0.47
SDC1-202ENST00000381150 ISG15P05161 165 aa12.09□□□□□ -0.47
SDC1-202ENST00000381150 ZNF25P17030 456 aaPredicted RBP12.09□□□□□ -0.47
SDC1-202ENST00000381150 WDR74Q6RFH5 385 aaPredicted RBP12.09□□□□□ -0.47
SDC1-202ENST00000381150 COMMD1Q8N668 190 aa12.09□□□□□ -0.47
SDC1-202ENST00000381150 A0A1B0GX78 115 aa12.08□□□□□ -0.47
SDC1-202ENST00000381150 HMGB3O15347 200 aaKnown RBP12.08□□□□□ -0.47
SDC1-202ENST00000381150 PMELP40967 661 aa12.08□□□□□ -0.47
SDC1-202ENST00000381150 ARL4DP49703 201 aa12.08□□□□□ -0.47
SDC1-202ENST00000381150 OR5AS1Q8N127 324 aa12.08□□□□□ -0.47
SDC1-202ENST00000381150 LGI3Q8N145 548 aa12.08□□□□□ -0.47
SDC1-202ENST00000381150 RNF133Q8WVZ7 376 aa12.08□□□□□ -0.47
SDC1-202ENST00000381150 HIST1H2BLQ99880 126 aa12.08□□□□□ -0.47
SDC1-202ENST00000381150 PRO3102Q9H379 93 aa12.08□□□□□ -0.47
SDC1-202ENST00000381150 CBLN4Q9NTU7 201 aa12.08□□□□□ -0.47
SDC1-202ENST00000381150 UBE2J1Q9Y385 318 aaPredicted RBP12.08□□□□□ -0.47
SDC1-202ENST00000381150 STRAPQ9Y3F4 350 aaKnown RBP12.08□□□□□ -0.47
SDC1-202ENST00000381150 A0A1W2PNR3 127 aa12.08□□□□□ -0.48
SDC1-202ENST00000381150 FTCDNL1E5RQL4 147 aa12.08□□□□□ -0.48
SDC1-202ENST00000381150 EREGO14944 169 aa12.08□□□□□ -0.48
SDC1-202ENST00000381150 HSPA12AO43301 675 aa12.08□□□□□ -0.48
SDC1-202ENST00000381150 MT-ATP6P00846 226 aa12.08□□□□□ -0.48
SDC1-202ENST00000381150 PGA3P0DJD8 388 aa12.08□□□□□ -0.48
SDC1-202ENST00000381150 LYL1P12980 280 aa12.08□□□□□ -0.48
SDC1-202ENST00000381150 GUCA1AP43080 201 aaPredicted RBP12.08□□□□□ -0.48
SDC1-202ENST00000381150 MLF1P58340 268 aa12.08□□□□□ -0.48
SDC1-202ENST00000381150 EWSR1Q01844 656 aaKnown RBP eCLIP12.08□□□□□ -0.48
SDC1-202ENST00000381150 ADIRFQ15847 76 aa12.08□□□□□ -0.48
SDC1-202ENST00000381150 SPEM1Q8N4L4 309 aa12.08□□□□□ -0.48
SDC1-202ENST00000381150 FGF21Q9NSA1 209 aa12.08□□□□□ -0.48
SDC1-202ENST00000381150 IL17BQ9UHF5 180 aa12.08□□□□□ -0.48
SDC1-202ENST00000381150 CACNA1DQ01668 2161 aa12.08□□□□□ -0.48
SDC1-202ENST00000381150 EXPH5Q8NEV8 1989 aa12.08□□□□□ -0.48
SDC1-202ENST00000381150 BCAT2O15382 392 aaPredicted RBP12.08□□□□□ -0.48
SDC1-202ENST00000381150 SCGB1D1O95968 90 aa12.08□□□□□ -0.48
SDC1-202ENST00000381150 MPZP25189 248 aa12.08□□□□□ -0.48
SDC1-202ENST00000381150 CFPP27918 469 aa12.08□□□□□ -0.48
SDC1-202ENST00000381150 ERVS71-1P61550 626 aa12.08□□□□□ -0.48
SDC1-202ENST00000381150 MALSU1Q96EH3 234 aa12.08□□□□□ -0.48
SDC1-202ENST00000381150 DBHP09172 617 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 GNRHRP30968 328 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 CD200P41217 278 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 KMT5CQ86Y97 462 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 SLC38A9Q8NBW4 561 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 LFNGQ8NES3 379 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 GPR87Q9BY21 358 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 WNT16Q9UBV4 365 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 SUSD2Q9UGT4 822 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 LAMP3Q9UQV4 416 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 K7ESF4 209 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 HSPB6O14558 160 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 DXOO77932 396 aaKnown RBP12.07□□□□□ -0.48
SDC1-202ENST00000381150 MBP02144 154 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 SPINK2P20155 84 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 DUSP1P28562 367 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 RPL29P47914 159 aaKnown RBP12.07□□□□□ -0.48
SDC1-202ENST00000381150 DAP3P51398 398 aaKnown RBP12.07□□□□□ -0.48
SDC1-202ENST00000381150 SPCS3P61009 180 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 GABREP78334 506 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 IL15RAQ13261 267 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 SLC22A25Q6T423 547 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 C5orf24Q7Z6I8 188 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 ZNF664Q8N3J9 261 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 OR2C3Q8N628 320 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 GPR173Q9NS66 373 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 COPS7AQ9UBW8 275 aa12.07□□□□□ -0.48
SDC1-202ENST00000381150 IFNL4K9M1U5 179 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 HSD17B6O14756 317 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 FGF7P21781 194 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 MTCP1P56278 107 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 HERV-K104P61576 105 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 HLA-DRB3P79483 266 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 TCEAL6Q6IPX3 200 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 H1FNTQ75WM6 255 aaPredicted RBP12.06□□□□□ -0.48
SDC1-202ENST00000381150 LHFPL1Q86WI0 220 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 THNSL2Q86YJ6 484 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 OR10S1Q8NGN2 331 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 RBM14Q96PK6 669 aaKnown RBP12.06□□□□□ -0.48
SDC1-202ENST00000381150 SCRT1Q9BWW7 348 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 MS4A18H0YCH9 400 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 MS4A18Q3C1V0 323 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 ZNF705AQ6ZN79 300 aaPredicted RBP12.06□□□□□ -0.48
SDC1-202ENST00000381150 CLDN23Q96B33 292 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 SLC25A31Q9H0C2 315 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 ZNF160Q9HCG1 818 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 FOXD3Q9UJU5 478 aaPredicted RBP12.06□□□□□ -0.48
SDC1-202ENST00000381150 IGLV3-12A0A075B6K2 115 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 IGKV1-9A0A0C4DH69 117 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 NKX2-6A6NCS4 301 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 SRSF10O75494 262 aaKnown RBP12.06□□□□□ -0.48
SDC1-202ENST00000381150 SRP19P09132 144 aaKnown RBP12.06□□□□□ -0.48
SDC1-202ENST00000381150 NKX2-1P43699 371 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms