RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 KCTD9Q7L273 389 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 NUFIP2Q7Z417 695 aaKnown RBP12.36□□□□□ -0.43
CLCN4-201ENST00000380829 STX12Q86Y82 276 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 MCEMP1Q8IX19 187 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 BPIFB2Q8N4F0 458 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 APH1AQ96BI3 265 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 BCO1Q9HAY6 547 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 ELL3Q9HB65 397 aaPredicted RBP12.36□□□□□ -0.43
CLCN4-201ENST00000380829 CYTL1Q9NRR1 136 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 UPB1Q9UBR1 384 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 LPAR3Q9UBY5 353 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 CACFD1Q9UGQ2 172 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 PTPRZ1P23471 2315 aaPredicted RBP12.35□□□□□ -0.43
CLCN4-201ENST00000380829 TRGV5A0A0B4J1U4 118 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 F8VVB4 439 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 F8VWA3 439 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 SCGNO76038 276 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 HLA-HP01893 362 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 ZNF735P0CB33 412 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 RAB5AP20339 215 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 LPAR6P43657 344 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 CAV2P51636 162 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 TMEM50BP56557 158 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 SOX8P57073 446 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 PPP1R1AQ13522 171 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 FAM24BQ8N5W8 94 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 TMEM178AQ8NBL3 297 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 RAB3CQ96E17 227 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 SLC6A7Q99884 636 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 C12orf49Q9H741 205 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 VSIG4Q9Y279 399 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 SPTBN2O15020 2390 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 GVINP1Q7Z2Y8 2422 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 ZNF503-AS2A6NEH8 195 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 MSGN1A6NI15 193 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 IFITM10A6NMD0 228 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 ARG1P05089 322 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 CHRM2P08172 466 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 CCL2P13500 99 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 CCNOP22674 350 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 ZNF92Q03936 586 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 SRSF4Q08170 494 aaKnown RBP12.35□□□□□ -0.43
CLCN4-201ENST00000380829 LPCAT3Q6P1A2 487 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 BHLHE23Q8NDY6 225 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 OR51T1Q8NGJ9 327 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 OR13C8Q8NGS7 320 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 SECTM1Q8WVN6 248 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 C10orf35Q96D05 121 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 ARHGAP5-AS1Q96IT6 56 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 SULT4A1Q9BR01 284 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 OCSTAMPQ9BR26 566 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 CST11Q9H112 138 aa12.35□□□□□ -0.43
CLCN4-201ENST00000380829 CEP250Q9BV73 2442 aa12.34□□□□□ -0.43
CLCN4-201ENST00000380829 C13orf42A0A1B0GVH6 325 aa12.34□□□□□ -0.43
CLCN4-201ENST00000380829 FAM230AA0A1W2PPH8 454 aa12.34□□□□□ -0.43
CLCN4-201ENST00000380829 ZNF724A8MTY0 619 aa12.34□□□□□ -0.43
CLCN4-201ENST00000380829 EDN3P14138 238 aa12.34□□□□□ -0.43
CLCN4-201ENST00000380829 ZNF100Q8IYN0 542 aa12.34□□□□□ -0.43
CLCN4-201ENST00000380829 ZSCAN4Q8NAM6 433 aaPredicted RBP12.34□□□□□ -0.43
CLCN4-201ENST00000380829 WDYHV1Q96HA8 205 aa12.34□□□□□ -0.43
CLCN4-201ENST00000380829 FN3KRPQ9HA64 309 aa12.34□□□□□ -0.43
CLCN4-201ENST00000380829 C9orf170A2RU37 121 aa12.33□□□□□ -0.43
CLCN4-201ENST00000380829 NUDT19A8MXV4 375 aa12.33□□□□□ -0.43
CLCN4-201ENST00000380829 RAD51DO75771 328 aa12.33□□□□□ -0.43
CLCN4-201ENST00000380829 HIST1H1DP16402 221 aaKnown RBP12.33□□□□□ -0.43
CLCN4-201ENST00000380829 HRH1P35367 487 aa12.33□□□□□ -0.43
CLCN4-201ENST00000380829 GSK3AP49840 483 aa12.33□□□□□ -0.43
CLCN4-201ENST00000380829 MTCP1P56278 107 aa12.33□□□□□ -0.43
CLCN4-201ENST00000380829 RNPS1Q15287 305 aaKnown RBP12.33□□□□□ -0.43
CLCN4-201ENST00000380829 C21orf62-AS1Q17RA5 79 aa12.33□□□□□ -0.43
CLCN4-201ENST00000380829 RNASE10Q5GAN6 216 aaKnown RBP12.33□□□□□ -0.43
CLCN4-201ENST00000380829 FAM76BQ5HYJ3 339 aa12.33□□□□□ -0.43
CLCN4-201ENST00000380829 CYB5R2Q6BCY4 276 aa12.33□□□□□ -0.43
CLCN4-201ENST00000380829 NAXEQ8NCW5 288 aa12.33□□□□□ -0.43
CLCN4-201ENST00000380829 CCDC54Q8NEL0 328 aa12.33□□□□□ -0.43
CLCN4-201ENST00000380829 CA5BP1Q8WTZ4 195 aa12.33□□□□□ -0.43
CLCN4-201ENST00000380829 S100A13Q99584 98 aa12.33□□□□□ -0.43
CLCN4-201ENST00000380829 NUDT16L1Q9BRJ7 211 aaKnown RBP12.33□□□□□ -0.43
CLCN4-201ENST00000380829 URM1Q9BTM9 101 aaKnown RBP12.33□□□□□ -0.43
CLCN4-201ENST00000380829 FAM157AC9JC47 383 aa12.33□□□□□ -0.44
CLCN4-201ENST00000380829 RPL36A-HNRNPH2H7BZ11 118 aa12.33□□□□□ -0.44
CLCN4-201ENST00000380829 MED6O75586 246 aa12.33□□□□□ -0.44
CLCN4-201ENST00000380829 SERPINA5P05154 406 aa12.33□□□□□ -0.44
CLCN4-201ENST00000380829 VAMP1P23763 118 aa12.33□□□□□ -0.44
CLCN4-201ENST00000380829 FAM3AP98173 230 aa12.33□□□□□ -0.44
CLCN4-201ENST00000380829 NRN1LQ496H8 165 aa12.33□□□□□ -0.44
CLCN4-201ENST00000380829 OR56B1Q8NGI3 324 aa12.33□□□□□ -0.44
CLCN4-201ENST00000380829 S100PBPQ96BU1 408 aa12.33□□□□□ -0.44
CLCN4-201ENST00000380829 ZDHHC11Q9H8X9 412 aa12.33□□□□□ -0.44
CLCN4-201ENST00000380829 CHMP1AQ9HD42 196 aaPredicted RBP12.33□□□□□ -0.44
CLCN4-201ENST00000380829 PRSS50Q9UI38 385 aa12.33□□□□□ -0.44
CLCN4-201ENST00000380829 ZNF107Q9UII5 783 aaPredicted RBP12.33□□□□□ -0.44
CLCN4-201ENST00000380829 PTPRBP23467 1997 aa12.32□□□□□ -0.44
CLCN4-201ENST00000380829 IGKV1-27A0A075B6S5 117 aa12.32□□□□□ -0.44
CLCN4-201ENST00000380829 TEX13DA0A0J9YY54 714 aaPredicted RBP12.32□□□□□ -0.44
CLCN4-201ENST00000380829 hCG_38984A0A1B0GV85 526 aa12.32□□□□□ -0.44
CLCN4-201ENST00000380829 C7orf77A4D0Y5 90 aa12.32□□□□□ -0.44
CLCN4-201ENST00000380829 C5orf51A6NDU8 294 aa12.32□□□□□ -0.44
CLCN4-201ENST00000380829 DHRS7CA6NNS2 312 aa12.32□□□□□ -0.44
CLCN4-201ENST00000380829 M0R036 132 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms