RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 TMUB1Q9BVT8 246 aa10.53□□□□□ -0.72
SMN1-202ENST00000380707 SELENOIQ9C0D9 397 aa10.53□□□□□ -0.72
SMN1-202ENST00000380707 CST11Q9H112 138 aa10.53□□□□□ -0.72
SMN1-202ENST00000380707 SEBOXQ9HB31 216 aaPredicted RBP10.53□□□□□ -0.72
SMN1-202ENST00000380707 YLPM1P49750 1951 aaKnown RBP10.52□□□□□ -0.72
SMN1-202ENST00000380707 MALRD1Q5VYJ5 2156 aa10.52□□□□□ -0.72
SMN1-202ENST00000380707 LDLRAD4O15165 306 aa10.52□□□□□ -0.73
SMN1-202ENST00000380707 ZNF737O75373 536 aa10.52□□□□□ -0.73
SMN1-202ENST00000380707 MPIG6BO95866 241 aa10.52□□□□□ -0.73
SMN1-202ENST00000380707 CHRM2P08172 466 aa10.52□□□□□ -0.73
SMN1-202ENST00000380707 IGHV4-31P0DP07 118 aa10.52□□□□□ -0.73
SMN1-202ENST00000380707 CPT2P23786 658 aa10.52□□□□□ -0.73
SMN1-202ENST00000380707 CAPZA1P52907 286 aa10.52□□□□□ -0.73
SMN1-202ENST00000380707 SPCS2Q15005 226 aa10.52□□□□□ -0.73
SMN1-202ENST00000380707 TAF9Q16594 264 aa10.52□□□□□ -0.73
SMN1-202ENST00000380707 ESCO2Q56NI9 601 aa10.52□□□□□ -0.73
SMN1-202ENST00000380707 WDR25Q64LD2 544 aaPredicted RBP10.52□□□□□ -0.73
SMN1-202ENST00000380707 C17orf107Q6ZR85 190 aa10.52□□□□□ -0.73
SMN1-202ENST00000380707 USP43Q70EL4 1123 aa10.52□□□□□ -0.73
SMN1-202ENST00000380707 ZNF561Q8N587 486 aa10.52□□□□□ -0.73
SMN1-202ENST00000380707 MSI2Q96DH6 328 aaKnown RBP10.52□□□□□ -0.73
SMN1-202ENST00000380707 C18orf12Q96KH6 178 aa10.52□□□□□ -0.73
SMN1-202ENST00000380707 SSBP3Q9BWW4 388 aaPredicted RBP10.52□□□□□ -0.73
SMN1-202ENST00000380707 BARHL1Q9BZE3 327 aa10.52□□□□□ -0.73
SMN1-202ENST00000380707 SHARPINQ9H0F6 387 aa10.52□□□□□ -0.73
SMN1-202ENST00000380707 RBM38Q9H0Z9 239 aaKnown RBP10.52□□□□□ -0.73
SMN1-202ENST00000380707 DCSTAMPQ9H295 470 aa10.52□□□□□ -0.73
SMN1-202ENST00000380707 LPAR2Q9HBW0 351 aa10.52□□□□□ -0.73
SMN1-202ENST00000380707 CLN8Q9UBY8 286 aa10.52□□□□□ -0.73
SMN1-202ENST00000380707 OR5V1Q9UGF6 321 aa10.52□□□□□ -0.73
SMN1-202ENST00000380707 GLS2Q9UI32 602 aa10.52□□□□□ -0.73
SMN1-202ENST00000380707 TMEM272A0A1B0GTI8 110 aa10.51□□□□□ -0.73
SMN1-202ENST00000380707 TMEM82A0PJX8 343 aa10.51□□□□□ -0.73
SMN1-202ENST00000380707 KIAA1324LA8MWY0 1029 aaPredicted RBP10.51□□□□□ -0.73
SMN1-202ENST00000380707 H3BMQ9 156 aa10.51□□□□□ -0.73
SMN1-202ENST00000380707 K7N7A8 449 aa10.51□□□□□ -0.73
SMN1-202ENST00000380707 SIRPB1O00241 398 aa10.51□□□□□ -0.73
SMN1-202ENST00000380707 DEGS1O15121 323 aa10.51□□□□□ -0.73
SMN1-202ENST00000380707 NDUFB3O43676 98 aa10.51□□□□□ -0.73
SMN1-202ENST00000380707 PSPNO60542 156 aa10.51□□□□□ -0.73
SMN1-202ENST00000380707 CD99P14209 185 aa10.51□□□□□ -0.73
SMN1-202ENST00000380707 ZNF44P15621 663 aa10.51□□□□□ -0.73
SMN1-202ENST00000380707 LMO1P25800 156 aa10.51□□□□□ -0.73
SMN1-202ENST00000380707 EFNB2P52799 333 aa10.51□□□□□ -0.73
SMN1-202ENST00000380707 GNB2P62879 340 aa10.51□□□□□ -0.73
SMN1-202ENST00000380707 RPS27AP62979 156 aaKnown RBP10.51□□□□□ -0.73
SMN1-202ENST00000380707 LCN2P80188 198 aa10.51□□□□□ -0.73
SMN1-202ENST00000380707 IL13RA2Q14627 380 aa10.51□□□□□ -0.73
SMN1-202ENST00000380707 IDNKQ5T6J7 187 aa10.51□□□□□ -0.73
SMN1-202ENST00000380707 ASCC1Q8N9N2 400 aaKnown RBP10.51□□□□□ -0.73
SMN1-202ENST00000380707 TMEM185AQ8NFB2 350 aa10.51□□□□□ -0.73
SMN1-202ENST00000380707 ST8SIA4Q92187 359 aa10.51□□□□□ -0.73
SMN1-202ENST00000380707 Q96M66 194 aa10.51□□□□□ -0.73
SMN1-202ENST00000380707 BCL7BQ9BQE9 202 aa10.51□□□□□ -0.73
SMN1-202ENST00000380707 TMEM59Q9BXS4 323 aa10.51□□□□□ -0.73
SMN1-202ENST00000380707 SLC25A10Q9UBX3 287 aaPredicted RBP10.51□□□□□ -0.73
SMN1-202ENST00000380707 FBLN5Q9UBX5 448 aa10.51□□□□□ -0.73
SMN1-202ENST00000380707 MXRA5Q9NR99 2828 aa10.51□□□□□ -0.73
SMN1-202ENST00000380707 F8P00451 2351 aa10.5□□□□□ -0.73
SMN1-202ENST00000380707 TRAV24A0A0B4J272 114 aa10.5□□□□□ -0.73
SMN1-202ENST00000380707 SLC33A1O00400 549 aaPredicted RBP10.5□□□□□ -0.73
SMN1-202ENST00000380707 OR7C1O76099 320 aaPredicted RBP10.5□□□□□ -0.73
SMN1-202ENST00000380707 PAHP00439 452 aa10.5□□□□□ -0.73
SMN1-202ENST00000380707 TK1P04183 234 aa10.5□□□□□ -0.73
SMN1-202ENST00000380707 INHBBP09529 407 aa10.5□□□□□ -0.73
SMN1-202ENST00000380707 SNRPBP14678 240 aaKnown RBP10.5□□□□□ -0.73
SMN1-202ENST00000380707 GABRR1P24046 479 aa10.5□□□□□ -0.73
SMN1-202ENST00000380707 NPY4RP50391 375 aa10.5□□□□□ -0.73
SMN1-202ENST00000380707 LRRC10Q5BKY1 277 aa10.5□□□□□ -0.73
SMN1-202ENST00000380707 OR2W3Q7Z3T1 314 aa10.5□□□□□ -0.73
SMN1-202ENST00000380707 LINC00596Q86U02 117 aa10.5□□□□□ -0.73
SMN1-202ENST00000380707 CROCCP3Q8IVE0 287 aa10.5□□□□□ -0.73
SMN1-202ENST00000380707 LINC01356Q8N9X3 169 aa10.5□□□□□ -0.73
SMN1-202ENST00000380707 SMR3AQ99954 134 aa10.5□□□□□ -0.73
SMN1-202ENST00000380707 NICN1Q9BSH3 213 aa10.5□□□□□ -0.73
SMN1-202ENST00000380707 CHST6Q9GZX3 395 aa10.5□□□□□ -0.73
SMN1-202ENST00000380707 IFT22Q9H7X7 185 aa10.5□□□□□ -0.73
SMN1-202ENST00000380707 ARHGAP32A7KAX9 2087 aa10.5□□□□□ -0.73
SMN1-202ENST00000380707 ABCA1O95477 2261 aa10.5□□□□□ -0.73
SMN1-202ENST00000380707 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.49□□□□□ -0.73
SMN1-202ENST00000380707 A0A0A6YYD4 124 aa10.49□□□□□ -0.73
SMN1-202ENST00000380707 DPPA5A6NC42 116 aa10.49□□□□□ -0.73
SMN1-202ENST00000380707 CCDC160A6NGH7 325 aa10.49□□□□□ -0.73
SMN1-202ENST00000380707 A8MXK9 166 aa10.49□□□□□ -0.73
SMN1-202ENST00000380707 B4DSR2 109 aa10.49□□□□□ -0.73
SMN1-202ENST00000380707 NOL3O60936 208 aaKnown RBP10.49□□□□□ -0.73
SMN1-202ENST00000380707 NDUFB7P17568 137 aa10.49□□□□□ -0.73
SMN1-202ENST00000380707 RANBP1P43487 201 aa10.49□□□□□ -0.73
SMN1-202ENST00000380707 OR3A1P47881 315 aa10.49□□□□□ -0.73
SMN1-202ENST00000380707 KRTAP1-1Q07627 177 aa10.49□□□□□ -0.73
SMN1-202ENST00000380707 SIGIRRQ6IA17 410 aa10.49□□□□□ -0.73
SMN1-202ENST00000380707 BRICD5Q6PL45 260 aa10.49□□□□□ -0.73
SMN1-202ENST00000380707 BTN2A1Q7KYR7 527 aa10.49□□□□□ -0.73
SMN1-202ENST00000380707 BIVMQ86UB2 503 aa10.49□□□□□ -0.73
SMN1-202ENST00000380707 BPIFB2Q8N4F0 458 aa10.49□□□□□ -0.73
SMN1-202ENST00000380707 CHST4Q8NCG5 386 aa10.49□□□□□ -0.73
SMN1-202ENST00000380707 OR4S1Q8NGB4 309 aa10.49□□□□□ -0.73
SMN1-202ENST00000380707 LGALS14Q8TCE9 139 aa10.49□□□□□ -0.73
SMN1-202ENST00000380707 CYYR1Q96J86 154 aa10.49□□□□□ -0.73
SMN1-202ENST00000380707 SNX22Q96L94 193 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms