RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 F8VVB4 439 aa17.35■□□□□ 0.37
VSX1-202ENST00000376709 F8VWA3 439 aa17.35■□□□□ 0.37
VSX1-202ENST00000376709 DUX4L2P0CJ85 424 aa17.35■□□□□ 0.37
VSX1-202ENST00000376709 DUX4L3P0CJ86 424 aa17.35■□□□□ 0.37
VSX1-202ENST00000376709 DUX4L4P0CJ87 422 aa17.35■□□□□ 0.37
VSX1-202ENST00000376709 DUX4L5P0CJ88 424 aa17.35■□□□□ 0.37
VSX1-202ENST00000376709 DUX4L6P0CJ89 424 aa17.35■□□□□ 0.37
VSX1-202ENST00000376709 DUX4L7P0CJ90 424 aa17.35■□□□□ 0.37
VSX1-202ENST00000376709 NOVA1P51513 510 aaKnown RBP17.35■□□□□ 0.37
VSX1-202ENST00000376709 S100A10P60903 97 aa17.35■□□□□ 0.37
VSX1-202ENST00000376709 RAB32Q13637 225 aa17.35■□□□□ 0.37
VSX1-202ENST00000376709 POC1AQ8NBT0 407 aa17.35■□□□□ 0.37
VSX1-202ENST00000376709 RRNAD1Q96FB5 475 aaKnown RBP17.35■□□□□ 0.37
VSX1-202ENST00000376709 OR5AC2Q9NZP5 309 aa17.35■□□□□ 0.37
VSX1-202ENST00000376709 DUX4Q9UBX2 424 aa17.35■□□□□ 0.37
VSX1-202ENST00000376709 KCNIP3Q9Y2W7 256 aa17.35■□□□□ 0.37
VSX1-202ENST00000376709 MUC6Q6W4X9 2439 aa17.35■□□□□ 0.37
VSX1-202ENST00000376709 RBM39Q14498 530 aaKnown RBP17.35■□□□□ 0.37
VSX1-202ENST00000376709 IGF2-ASQ6U949 168 aa17.35■□□□□ 0.37
VSX1-202ENST00000376709 FAM219AQ8IW50 185 aa17.35■□□□□ 0.37
VSX1-202ENST00000376709 GCNT2Q8N0V5 402 aa17.35■□□□□ 0.37
VSX1-202ENST00000376709 LGALS8O00214 317 aa17.34■□□□□ 0.37
VSX1-202ENST00000376709 TBC1D28Q2M2D7 210 aa17.34■□□□□ 0.37
VSX1-202ENST00000376709 IAH1Q2TAA2 248 aaPredicted RBP17.34■□□□□ 0.37
VSX1-202ENST00000376709 HAGHLQ6PII5 290 aaPredicted RBP17.34■□□□□ 0.37
VSX1-202ENST00000376709 Q6ZPA2 131 aa17.34■□□□□ 0.37
VSX1-202ENST00000376709 OR5T2Q8NGG2 359 aa17.34■□□□□ 0.37
VSX1-202ENST00000376709 RTN4IP1Q8WWV3 396 aaPredicted RBP17.34■□□□□ 0.37
VSX1-202ENST00000376709 OR5P3Q8WZ94 311 aa17.34■□□□□ 0.37
VSX1-202ENST00000376709 MPC1Q9Y5U8 109 aa17.34■□□□□ 0.37
VSX1-202ENST00000376709 LILRA1O75019 489 aa17.33■□□□□ 0.37
VSX1-202ENST00000376709 IFNA21P01568 189 aa17.33■□□□□ 0.37
VSX1-202ENST00000376709 IL32P24001 234 aa17.33■□□□□ 0.37
VSX1-202ENST00000376709 NBL1P41271 181 aa17.33■□□□□ 0.37
VSX1-202ENST00000376709 TGFBR3Q03167 851 aa17.33■□□□□ 0.37
VSX1-202ENST00000376709 SNTB1Q13884 538 aaKnown RBP17.33■□□□□ 0.37
VSX1-202ENST00000376709 SPATA46Q5T0L3 261 aa17.33■□□□□ 0.37
VSX1-202ENST00000376709 TFAP2EQ6VUC0 442 aa17.33■□□□□ 0.37
VSX1-202ENST00000376709 FOXRED2Q8IWF2 684 aa17.33■□□□□ 0.37
VSX1-202ENST00000376709 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.33■□□□□ 0.37
VSX1-202ENST00000376709 PIK3IP1Q96FE7 263 aa17.33■□□□□ 0.37
VSX1-202ENST00000376709 HS3ST6Q96QI5 342 aa17.33■□□□□ 0.37
VSX1-202ENST00000376709 TRIB1Q96RU8 372 aa17.33■□□□□ 0.37
VSX1-202ENST00000376709 IL36RNQ9UBH0 155 aa17.33■□□□□ 0.37
VSX1-202ENST00000376709 SPENQ96T58 3664 aaKnown RBP17.33■□□□□ 0.37
VSX1-202ENST00000376709 A8MXK9 166 aa17.33■□□□□ 0.36
VSX1-202ENST00000376709 HSPB6O14558 160 aa17.33■□□□□ 0.36
VSX1-202ENST00000376709 SYNGR1O43759 233 aa17.33■□□□□ 0.36
VSX1-202ENST00000376709 FGF2P09038 288 aa17.33■□□□□ 0.36
VSX1-202ENST00000376709 HERV-K104P61576 105 aa17.33■□□□□ 0.36
VSX1-202ENST00000376709 DEFB109BQ30KR1 87 aa17.33■□□□□ 0.36
VSX1-202ENST00000376709 PHLDA2Q53GA4 152 aa17.33■□□□□ 0.36
VSX1-202ENST00000376709 OR2T2Q6IF00 324 aa17.33■□□□□ 0.36
VSX1-202ENST00000376709 BVESQ8NE79 360 aa17.33■□□□□ 0.36
VSX1-202ENST00000376709 NEK7Q8TDX7 302 aa17.33■□□□□ 0.36
VSX1-202ENST00000376709 C17orf50Q8WW18 174 aa17.33■□□□□ 0.36
VSX1-202ENST00000376709 NAA60Q9H7X0 242 aa17.33■□□□□ 0.36
VSX1-202ENST00000376709 SLC2A9Q9NRM0 540 aa17.33■□□□□ 0.36
VSX1-202ENST00000376709 GLRX2Q9NS18 164 aa17.33■□□□□ 0.36
VSX1-202ENST00000376709 AKAP13Q12802 2813 aa17.32■□□□□ 0.36
VSX1-202ENST00000376709 PRSS44E7EML9 344 aa17.32■□□□□ 0.36
VSX1-202ENST00000376709 TPD52L2O43399 206 aaKnown RBP17.32■□□□□ 0.36
VSX1-202ENST00000376709 IGHG3P01860 377 aa17.32■□□□□ 0.36
VSX1-202ENST00000376709 LYL1P12980 280 aa17.32■□□□□ 0.36
VSX1-202ENST00000376709 CEACAM1P13688 526 aa17.32■□□□□ 0.36
VSX1-202ENST00000376709 SPINK2P20155 84 aa17.32■□□□□ 0.36
VSX1-202ENST00000376709 MPV17LQ2QL34 196 aa17.32■□□□□ 0.36
VSX1-202ENST00000376709 PAN3Q58A45 887 aaKnown RBP17.32■□□□□ 0.36
VSX1-202ENST00000376709 ZNF573Q86YE8 665 aa17.32■□□□□ 0.36
VSX1-202ENST00000376709 SLC38A6Q8IZM9 456 aa17.32■□□□□ 0.36
VSX1-202ENST00000376709 MOB3AQ96BX8 217 aa17.32■□□□□ 0.36
VSX1-202ENST00000376709 CLCF1Q9UBD9 225 aa17.32■□□□□ 0.36
VSX1-202ENST00000376709 SHANK1Q9Y566 2161 aa17.32■□□□□ 0.36
VSX1-202ENST00000376709 ARID1AO14497 2285 aa17.32■□□□□ 0.36
VSX1-202ENST00000376709 A0A1W2PR80 420 aa17.32■□□□□ 0.36
VSX1-202ENST00000376709 OR5B21A6NL26 309 aa17.32■□□□□ 0.36
VSX1-202ENST00000376709 OR5AC1P0C628 307 aa17.32■□□□□ 0.36
VSX1-202ENST00000376709 PRKACAP17612 351 aa17.32■□□□□ 0.36
VSX1-202ENST00000376709 UBE2NP61088 152 aaKnown RBP17.32■□□□□ 0.36
VSX1-202ENST00000376709 GNG3P63215 75 aa17.32■□□□□ 0.36
VSX1-202ENST00000376709 SP6Q3SY56 376 aa17.32■□□□□ 0.36
VSX1-202ENST00000376709 GALNT11Q8NCW6 608 aa17.32■□□□□ 0.36
VSX1-202ENST00000376709 DLL3Q9NYJ7 618 aa17.32■□□□□ 0.36
VSX1-202ENST00000376709 MSGN1A6NI15 193 aa17.31■□□□□ 0.36
VSX1-202ENST00000376709 TPT1P13693 172 aaKnown RBP17.31■□□□□ 0.36
VSX1-202ENST00000376709 CA6P23280 308 aa17.31■□□□□ 0.36
VSX1-202ENST00000376709 DUSP1P28562 367 aa17.31■□□□□ 0.36
VSX1-202ENST00000376709 IL15RAQ13261 267 aa17.31■□□□□ 0.36
VSX1-202ENST00000376709 TUSC1Q2TAM9 212 aa17.31■□□□□ 0.36
VSX1-202ENST00000376709 IGSF11Q5DX21 431 aa17.31■□□□□ 0.36
VSX1-202ENST00000376709 HSD17B13Q7Z5P4 300 aaPredicted RBP17.31■□□□□ 0.36
VSX1-202ENST00000376709 SYT3Q9BQG1 590 aa17.31■□□□□ 0.36
VSX1-202ENST00000376709 TRAV17A0A0B4J275 112 aa17.3■□□□□ 0.36
VSX1-202ENST00000376709 LYZL6O75951 148 aa17.3■□□□□ 0.36
VSX1-202ENST00000376709 M6PRP20645 277 aa17.3■□□□□ 0.36
VSX1-202ENST00000376709 AADACP22760 399 aa17.3■□□□□ 0.36
VSX1-202ENST00000376709 MRPL49Q13405 166 aaKnown RBP17.3■□□□□ 0.36
VSX1-202ENST00000376709 GGNBP1Q5YKI7 109 aa17.3■□□□□ 0.36
VSX1-202ENST00000376709 STOML3Q8TAV4 291 aa17.3■□□□□ 0.36
VSX1-202ENST00000376709 MRPL24Q96A35 216 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms