RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 C15orf54Q8N8G6 183 aa12.57□□□□□ -0.4
MSH5-201ENST00000375703 OR2V1Q8NHB1 315 aa12.57□□□□□ -0.4
MSH5-201ENST00000375703 COA4Q9NYJ1 87 aa12.57□□□□□ -0.4
MSH5-201ENST00000375703 NTN3O00634 580 aaPredicted RBP12.57□□□□□ -0.4
MSH5-201ENST00000375703 NOVA1P51513 510 aaKnown RBP12.57□□□□□ -0.4
MSH5-201ENST00000375703 ZFP36L1Q07352 338 aaKnown RBP12.57□□□□□ -0.4
MSH5-201ENST00000375703 TRA2AQ13595 282 aaKnown RBP eCLIP12.57□□□□□ -0.4
MSH5-201ENST00000375703 OR8B8Q15620 311 aa12.57□□□□□ -0.4
MSH5-201ENST00000375703 SLC35G3Q8N808 338 aa12.57□□□□□ -0.4
MSH5-201ENST00000375703 HSD17B11Q8NBQ5 300 aa12.57□□□□□ -0.4
MSH5-201ENST00000375703 TP53RKQ96S44 253 aa12.57□□□□□ -0.4
MSH5-201ENST00000375703 C19orf12Q9NSK7 152 aa12.57□□□□□ -0.4
MSH5-201ENST00000375703 ZNF587BE7ETH6 402 aa12.56□□□□□ -0.4
MSH5-201ENST00000375703 MPPED1O15442 326 aa12.56□□□□□ -0.4
MSH5-201ENST00000375703 PPYP01298 95 aa12.56□□□□□ -0.4
MSH5-201ENST00000375703 NPBWR2P48146 333 aa12.56□□□□□ -0.4
MSH5-201ENST00000375703 UCP2P55851 309 aa12.56□□□□□ -0.4
MSH5-201ENST00000375703 RIPPLY2Q5TAB7 128 aa12.56□□□□□ -0.4
MSH5-201ENST00000375703 Q6ZPA2 131 aa12.56□□□□□ -0.4
MSH5-201ENST00000375703 SLC25A26Q70HW3 274 aa12.56□□□□□ -0.4
MSH5-201ENST00000375703 LURAP1LQ8IV03 231 aa12.56□□□□□ -0.4
MSH5-201ENST00000375703 ZNF611Q8N823 705 aa12.56□□□□□ -0.4
MSH5-201ENST00000375703 SH3BGRL3Q9H299 93 aa12.56□□□□□ -0.4
MSH5-201ENST00000375703 CNTRLQ7Z7A1 2325 aa12.56□□□□□ -0.4
MSH5-201ENST00000375703 C3orf85A0A1B0GTC6 90 aa12.56□□□□□ -0.4
MSH5-201ENST00000375703 C1QL1O75973 258 aa12.56□□□□□ -0.4
MSH5-201ENST00000375703 SNRNP70P08621 437 aaKnown RBP12.56□□□□□ -0.4
MSH5-201ENST00000375703 FOLR2P14207 255 aa12.56□□□□□ -0.4
MSH5-201ENST00000375703 RAB5CP51148 216 aa12.56□□□□□ -0.4
MSH5-201ENST00000375703 RAB5BP61020 215 aa12.56□□□□□ -0.4
MSH5-201ENST00000375703 TECTBQ96PL2 329 aa12.56□□□□□ -0.4
MSH5-201ENST00000375703 SCRT1Q9BWW7 348 aa12.56□□□□□ -0.4
MSH5-201ENST00000375703 RNF122Q9H9V4 155 aa12.56□□□□□ -0.4
MSH5-201ENST00000375703 SPACA1Q9HBV2 294 aa12.56□□□□□ -0.4
MSH5-201ENST00000375703 EDN3P14138 238 aa12.55□□□□□ -0.4
MSH5-201ENST00000375703 OTX2P32243 289 aa12.55□□□□□ -0.4
MSH5-201ENST00000375703 CLDN15P56746 228 aa12.55□□□□□ -0.4
MSH5-201ENST00000375703 ABLIM2Q6H8Q1 611 aa12.55□□□□□ -0.4
MSH5-201ENST00000375703 OR4D5Q8NGN0 318 aa12.55□□□□□ -0.4
MSH5-201ENST00000375703 SFT2D1Q8WV19 159 aa12.55□□□□□ -0.4
MSH5-201ENST00000375703 ADGRG7Q96K78 797 aa12.55□□□□□ -0.4
MSH5-201ENST00000375703 EGLN1Q9GZT9 426 aa12.55□□□□□ -0.4
MSH5-201ENST00000375703 PLSCR2Q9NRY7 297 aa12.55□□□□□ -0.4
MSH5-201ENST00000375703 PARPBPQ9NWS1 579 aa12.55□□□□□ -0.4
MSH5-201ENST00000375703 STRAPQ9Y3F4 350 aaKnown RBP12.55□□□□□ -0.4
MSH5-201ENST00000375703 YKT6O15498 198 aa12.55□□□□□ -0.4
MSH5-201ENST00000375703 IGHV3-9P01782 118 aa12.55□□□□□ -0.4
MSH5-201ENST00000375703 PAX6P26367 422 aa12.55□□□□□ -0.4
MSH5-201ENST00000375703 PMELP40967 661 aa12.55□□□□□ -0.4
MSH5-201ENST00000375703 ASCL1P50553 236 aa12.55□□□□□ -0.4
MSH5-201ENST00000375703 RPS18P62269 152 aaKnown RBP12.55□□□□□ -0.4
MSH5-201ENST00000375703 HPSE2Q8WWQ2 592 aa12.55□□□□□ -0.4
MSH5-201ENST00000375703 C7orf77A4D0Y5 90 aa12.54□□□□□ -0.4
MSH5-201ENST00000375703 NKX2-6A6NCS4 301 aa12.54□□□□□ -0.4
MSH5-201ENST00000375703 M0R036 132 aa12.54□□□□□ -0.4
MSH5-201ENST00000375703 DUSP3P51452 185 aaPredicted RBP12.54□□□□□ -0.4
MSH5-201ENST00000375703 Q0VFX4 171 aa12.54□□□□□ -0.4
MSH5-201ENST00000375703 HABP2Q14520 560 aaPredicted RBP12.54□□□□□ -0.4
MSH5-201ENST00000375703 AWAT1Q58HT5 328 aa12.54□□□□□ -0.4
MSH5-201ENST00000375703 CPEB3Q8NE35 698 aaKnown RBP12.54□□□□□ -0.4
MSH5-201ENST00000375703 ABHD3Q8WU67 409 aa12.54□□□□□ -0.4
MSH5-201ENST00000375703 ZNF845Q96IR2 970 aaPredicted RBP12.54□□□□□ -0.4
MSH5-201ENST00000375703 UBE2J1Q9Y385 318 aaPredicted RBP12.54□□□□□ -0.4
MSH5-201ENST00000375703 MED19A0JLT2 244 aaPredicted RBP12.54□□□□□ -0.4
MSH5-201ENST00000375703 LRRC3CA6NJW4 275 aa12.54□□□□□ -0.4
MSH5-201ENST00000375703 C1orf196B1AJZ1 125 aa12.54□□□□□ -0.4
MSH5-201ENST00000375703 TRDCB7Z8K6 153 aa12.54□□□□□ -0.4
MSH5-201ENST00000375703 RPL36A-HNRNPH2H7BZ11 118 aa12.54□□□□□ -0.4
MSH5-201ENST00000375703 IFNA4P05014 189 aa12.54□□□□□ -0.4
MSH5-201ENST00000375703 MMP7P09237 267 aaPredicted RBP12.54□□□□□ -0.4
MSH5-201ENST00000375703 PTAFRP25105 342 aa12.54□□□□□ -0.4
MSH5-201ENST00000375703 GNRHRP30968 328 aa12.54□□□□□ -0.4
MSH5-201ENST00000375703 EWSR1Q01844 656 aaKnown RBP eCLIP12.54□□□□□ -0.4
MSH5-201ENST00000375703 SPIN3Q5JUX0 258 aa12.54□□□□□ -0.4
MSH5-201ENST00000375703 DPPA2Q7Z7J5 298 aa12.54□□□□□ -0.4
MSH5-201ENST00000375703 HIST1H2BAQ96A08 127 aa12.54□□□□□ -0.4
MSH5-201ENST00000375703 SPSB4Q96A44 273 aa12.54□□□□□ -0.4
MSH5-201ENST00000375703 IP6K3Q96PC2 410 aa12.54□□□□□ -0.4
MSH5-201ENST00000375703 C1QTNF5Q9BXJ0 243 aa12.54□□□□□ -0.4
MSH5-201ENST00000375703 IFT22Q9H7X7 185 aa12.54□□□□□ -0.4
MSH5-201ENST00000375703 SLC7A10Q9NS82 523 aa12.54□□□□□ -0.4
MSH5-201ENST00000375703 FAM86C1Q9NVL1 165 aa12.54□□□□□ -0.4
MSH5-201ENST00000375703 FAM24AA6NFZ4 105 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 PATE3B3GLJ2 98 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 IGHEP01854 428 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 GDF1P27539 372 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 SNRPEP62304 92 aaKnown RBP12.53□□□□□ -0.4
MSH5-201ENST00000375703 DAZAP2Q15038 168 aaPredicted RBP12.53□□□□□ -0.4
MSH5-201ENST00000375703 CDCP2Q5VXM1 449 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 TMEM182Q6ZP80 229 aaPredicted RBP12.53□□□□□ -0.4
MSH5-201ENST00000375703 ZNF695Q8IW36 515 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 FAM185AQ8N0U4 392 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 OR2C3Q8N628 320 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 EXTL1Q92935 676 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 BOD1Q96IK1 185 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 C20orf24Q9BUV8 137 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 TMEM222Q9H0R3 208 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 CYTIPO60759 359 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 CDS2O95674 445 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 ZNF44P15621 663 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms