RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 FBXW9Q5XUX1 488 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 DHRS13Q6UX07 377 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 GALNTL5Q7Z4T8 443 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 CPEB3Q8NE35 698 aaKnown RBP10.63□□□□□ -0.71
C9orf3-203ENST00000375315 HAS2Q92819 552 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 CTHRC1Q96CG8 243 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 KLHDC3Q9BQ90 382 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 SRPK3Q9UPE1 567 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 HIF3AQ9Y2N7 669 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 GSTP1P09211 210 aaKnown RBP10.62□□□□□ -0.71
C9orf3-203ENST00000375315 MDKP21741 143 aaPredicted RBP10.62□□□□□ -0.71
C9orf3-203ENST00000375315 EMP2P54851 167 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 RBX1P62877 108 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 RABEPKQ7Z6M1 372 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 OR2G3Q8NGZ4 309 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 NCOR1P1Q9H4R4 102 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 FKBP11Q9NYL4 201 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 LRFN1Q9P244 771 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 PADI1Q9ULC6 663 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 HEATR5AQ86XA9 2040 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 H3BMH7 237 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 CA11O75493 328 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 AHSA1O95433 338 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 IRF2P14316 349 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 BRS3P32247 399 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 VAMP2P63027 116 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 PCK2Q16822 640 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 SPSB3Q6PJ21 355 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 SSX7Q7RTT5 188 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 LHFPL1Q86WI0 220 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 CATSPERDQ86XM0 798 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 BCORP1Q8N888 145 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 OR52N4Q8NGI2 321 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 OR13G1Q8NGZ3 307 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 VSTM2LQ96N03 204 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 AK3Q9UIJ7 227 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 ANAPC10Q9UM13 185 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 OR6A2O95222 327 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 CSTAP01040 98 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 CELA2AP08217 269 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 VSIG8P0DPA2 414 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.62□□□□□ -0.71
C9orf3-203ENST00000375315 B9D1Q9UPM9 204 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 GAB2Q9UQC2 676 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 OSGIN2Q9Y236 505 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 B3GALT1Q9Y5Z6 326 aa10.62□□□□□ -0.71
C9orf3-203ENST00000375315 A0A1B0GU03 582 aa10.61□□□□□ -0.71
C9orf3-203ENST00000375315 ARID1AO14497 2285 aa10.61□□□□□ -0.71
C9orf3-203ENST00000375315 GUSBP08236 651 aa10.61□□□□□ -0.71
C9orf3-203ENST00000375315 OR10J1P30954 320 aa10.61□□□□□ -0.71
C9orf3-203ENST00000375315 RPL23AP62750 156 aaKnown RBP10.61□□□□□ -0.71
C9orf3-203ENST00000375315 TMEM176BQ3YBM2 270 aaPredicted RBP10.61□□□□□ -0.71
C9orf3-203ENST00000375315 C1QL3Q5VWW1 255 aa10.61□□□□□ -0.71
C9orf3-203ENST00000375315 ETFRF1Q6IPR1 90 aa10.61□□□□□ -0.71
C9orf3-203ENST00000375315 CBLN3Q6UW01 205 aa10.61□□□□□ -0.71
C9orf3-203ENST00000375315 SLC22A24Q8N4F4 322 aa10.61□□□□□ -0.71
C9orf3-203ENST00000375315 AGBL5Q8NDL9 886 aa10.61□□□□□ -0.71
C9orf3-203ENST00000375315 RBMXL1Q96E39 390 aaKnown RBP10.61□□□□□ -0.71
C9orf3-203ENST00000375315 CTDSP1Q9GZU7 261 aa10.61□□□□□ -0.71
C9orf3-203ENST00000375315 DNAJC4Q9NNZ3 241 aa10.61□□□□□ -0.71
C9orf3-203ENST00000375315 COPS7AQ9UBW8 275 aa10.61□□□□□ -0.71
C9orf3-203ENST00000375315 POLR3KQ9Y2Y1 108 aaPredicted RBP10.61□□□□□ -0.71
C9orf3-203ENST00000375315 LOC107986453A0A1B0GWG9 222 aa10.61□□□□□ -0.71
C9orf3-203ENST00000375315 A8MVM7 634 aa10.61□□□□□ -0.71
C9orf3-203ENST00000375315 ZNF66Q6ZN08 573 aa10.61□□□□□ -0.71
C9orf3-203ENST00000375315 COX15Q7KZN9 410 aa10.61□□□□□ -0.71
C9orf3-203ENST00000375315 LRRC75AQ8NAA5 344 aa10.61□□□□□ -0.71
C9orf3-203ENST00000375315 ZFP62Q8NB50 900 aaPredicted RBP10.61□□□□□ -0.71
C9orf3-203ENST00000375315 ADPRHL1Q8NDY3 354 aa10.61□□□□□ -0.71
C9orf3-203ENST00000375315 ZPBPQ9BS86 351 aa10.61□□□□□ -0.71
C9orf3-203ENST00000375315 ZFP30Q9Y2G7 519 aa10.61□□□□□ -0.71
C9orf3-203ENST00000375315 RCL1Q9Y2P8 373 aaKnown RBP10.61□□□□□ -0.71
C9orf3-203ENST00000375315 NSG1A0A0A6YYJ2 146 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 HBE1P02100 147 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 MBPP02686 304 aaPredicted RBP10.6□□□□□ -0.71
C9orf3-203ENST00000375315 OPN1LWP04000 364 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 HNF1AP20823 631 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 HSD11B1P28845 292 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 PTGER4P35408 488 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 PDLIM4P50479 330 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 TAS2R46P59540 309 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 ZNF266Q14584 549 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 LYPD6Q86Y78 171 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 MRPL24Q96A35 216 aaKnown RBP10.6□□□□□ -0.71
C9orf3-203ENST00000375315 EHFQ9NZC4 300 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 PTRH2Q9Y3E5 179 aaKnown RBP10.6□□□□□ -0.71
C9orf3-203ENST00000375315 RP1L1Q8IWN7 2480 aaPredicted RBP10.6□□□□□ -0.71
C9orf3-203ENST00000375315 LAMA5O15230 3695 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 NKX2-2O95096 273 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 HPRT1P00492 218 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 DUSP3P51452 185 aaPredicted RBP10.6□□□□□ -0.71
C9orf3-203ENST00000375315 SLC37A1P57057 533 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 GABREP78334 506 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 ROM1Q03395 351 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 ARFRP1Q13795 201 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 COL5A1-AS1Q5SY13 56 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 RHBDD2Q6NTF9 364 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 ZNF880Q6PDB4 577 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 MARCH3Q86UD3 253 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 OR10G4Q8NGN3 311 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms