RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 HAAOP46952 286 aa10.4□□□□□ -0.74
HMGCL-202ENST00000374487 GPM6AP51674 278 aa10.4□□□□□ -0.74
HMGCL-202ENST00000374487 TLE1Q04724 770 aa10.4□□□□□ -0.74
HMGCL-202ENST00000374487 KLRB1Q12918 225 aa10.4□□□□□ -0.74
HMGCL-202ENST00000374487 ZDHHC23Q8IYP9 409 aa10.4□□□□□ -0.74
HMGCL-202ENST00000374487 TOMM40LQ969M1 308 aa10.4□□□□□ -0.74
HMGCL-202ENST00000374487 HIST1H2AAQ96QV6 131 aa10.4□□□□□ -0.74
HMGCL-202ENST00000374487 C12orf4Q9NQ89 552 aa10.4□□□□□ -0.74
HMGCL-202ENST00000374487 C1orf123Q9NWV4 160 aa10.4□□□□□ -0.74
HMGCL-202ENST00000374487 PRSS50Q9UI38 385 aa10.4□□□□□ -0.74
HMGCL-202ENST00000374487 STARD10Q9Y365 291 aa10.4□□□□□ -0.74
HMGCL-202ENST00000374487 PQLC2LA1A4F0 135 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 MFSD2BA6NFX1 497 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 SLC22A20A6NK97 555 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 MSTNO14793 375 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 NGFP01138 241 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 APLNRP35414 380 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 NPBWR2P48146 333 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 CEACAM21Q3KPI0 293 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 ABCA11PQ4W5N1 156 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 FAM74A1Q5RGS3 127 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 SLC22A25Q6T423 547 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 DHRS11Q6UWP2 260 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 OR1S1Q8NH92 325 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 WDYHV1Q96HA8 205 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 OR10C1Q96KK4 312 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 POM121L2Q96KW2 1035 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 C2orf50Q96LR7 162 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 ZNF75AQ96N20 296 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 RNF126Q9BV68 326 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 C1QTNF6Q9BXI9 259 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 ZNF286AQ9HBT8 521 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 KCNIP3Q9Y2W7 256 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 MEMO1Q9Y316 297 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 TEX46H3BTG2 121 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 PET100P0DJ07 73 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 ZNF728P0DKX0 622 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 PTGER4P35408 488 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 FXYD4P59646 89 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 HIKESHIQ53FT3 197 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 IGFL2Q6UWQ7 119 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 UNQ6126/PRO20091Q6UXV3 157 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 CISD2Q8N5K1 135 aaKnown RBP10.39□□□□□ -0.75
HMGCL-202ENST00000374487 BHLHE23Q8NDY6 225 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 SLAMF9Q96A28 289 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 PHYHIPLQ96FC7 376 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 REG4Q9BYZ8 158 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 SPTA1P02549 2419 aa10.39□□□□□ -0.75
HMGCL-202ENST00000374487 ZNF407Q9C0G0 2248 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 TRBV6-7A0A0A0MS04 114 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 ZNF732B4DXR9 585 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 ZNF205O95201 554 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 CST4P01036 141 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 PLA2G2AP14555 144 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 PIGPP57054 158 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 S100A10P60903 97 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 RNFT1Q5M7Z0 435 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 FBXW9Q5XUX1 488 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 TMEM211Q6ICI0 200 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 IGFL3Q6UXB1 125 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 ZADH2Q8N4Q0 377 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 NANOS1Q8WY41 292 aaKnown RBP10.38□□□□□ -0.75
HMGCL-202ENST00000374487 CCDC120Q96HB5 630 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 DHRS9Q9BPW9 319 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 DECR2Q9NUI1 292 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 RASL12Q9NYN1 266 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 SPRR3Q9UBC9 169 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 ZNF629Q9UEG4 869 aaPredicted RBP10.38□□□□□ -0.75
HMGCL-202ENST00000374487 PRRC2CQ9Y520 2896 aaKnown RBP10.38□□□□□ -0.75
HMGCL-202ENST00000374487 CRYM-AS1A6NIL9 109 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 H0YIZ8 118 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 IFNA21P01568 189 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 BCL3P20749 454 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 FCGR2CP31995 323 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 PMP22Q01453 160 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 PRSS54Q6PEW0 395 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 Q6ZS92 163 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 P4HA3Q7Z4N8 544 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 DPPA2Q7Z7J5 298 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 POM121Q96HA1 1249 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 DMRTA2Q96SC8 542 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 SLX1AQ9BQ83 275 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 LIME1Q9H400 295 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 OPA3Q9H6K4 179 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 NARFLQ9H6Q4 476 aa10.38□□□□□ -0.75
HMGCL-202ENST00000374487 DNAJC13O75165 2243 aa10.37□□□□□ -0.75
HMGCL-202ENST00000374487 FREM1Q5H8C1 2179 aa10.37□□□□□ -0.75
HMGCL-202ENST00000374487 ANKRD30BLA7E2S9 258 aa10.37□□□□□ -0.75
HMGCL-202ENST00000374487 CD300LBA8K4G0 201 aa10.37□□□□□ -0.75
HMGCL-202ENST00000374487 TRAPPC2LH3BP13 241 aa10.37□□□□□ -0.75
HMGCL-202ENST00000374487 IL18BPO95998 194 aa10.37□□□□□ -0.75
HMGCL-202ENST00000374487 PMELP40967 661 aa10.37□□□□□ -0.75
HMGCL-202ENST00000374487 GLP1RP43220 463 aa10.37□□□□□ -0.75
HMGCL-202ENST00000374487 TNFSF10P50591 281 aa10.37□□□□□ -0.75
HMGCL-202ENST00000374487 RAB32Q13637 225 aa10.37□□□□□ -0.75
HMGCL-202ENST00000374487 SNTB1Q13884 538 aaKnown RBP10.37□□□□□ -0.75
HMGCL-202ENST00000374487 IAH1Q2TAA2 248 aaPredicted RBP10.37□□□□□ -0.75
HMGCL-202ENST00000374487 PAN3Q58A45 887 aaKnown RBP10.37□□□□□ -0.75
HMGCL-202ENST00000374487 FOXRED2Q8IWF2 684 aa10.37□□□□□ -0.75
HMGCL-202ENST00000374487 MKXQ8IYA7 352 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms