RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 TMEM155Q4W5P6 130 aa13.25□□□□□ -0.29
TMEM53-204ENST00000372243 SIGIRRQ6IA17 410 aa13.25□□□□□ -0.29
TMEM53-204ENST00000372243 CNIH2Q6PI25 160 aa13.25□□□□□ -0.29
TMEM53-204ENST00000372243 METAP1DQ6UB28 335 aaPredicted RBP13.25□□□□□ -0.29
TMEM53-204ENST00000372243 CCDC190Q86UF4 302 aa13.25□□□□□ -0.29
TMEM53-204ENST00000372243 C19orf18Q8NEA5 215 aa13.25□□□□□ -0.29
TMEM53-204ENST00000372243 SDSLQ96GA7 329 aa13.25□□□□□ -0.29
TMEM53-204ENST00000372243 DIRAS2Q96HU8 199 aa13.25□□□□□ -0.29
TMEM53-204ENST00000372243 RABL2AQ9UBK7 228 aaPredicted RBP13.25□□□□□ -0.29
TMEM53-204ENST00000372243 EXTL2Q9UBQ6 330 aa13.25□□□□□ -0.29
TMEM53-204ENST00000372243 OR14J1Q9UGF5 321 aa13.25□□□□□ -0.29
TMEM53-204ENST00000372243 RABL2BQ9UNT1 228 aa13.25□□□□□ -0.29
TMEM53-204ENST00000372243 DEGS1O15121 323 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 PPIHO43447 177 aaKnown RBP13.24□□□□□ -0.29
TMEM53-204ENST00000372243 PDCD6O75340 191 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 CHATP28329 748 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 BLVRBP30043 206 aaPredicted RBP13.24□□□□□ -0.29
TMEM53-204ENST00000372243 ETV6P41212 452 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 MNDAP41218 407 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 GPR6P46095 362 aaPredicted RBP13.24□□□□□ -0.29
TMEM53-204ENST00000372243 BAIAP2L2Q6UXY1 529 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 ZNF788Q6ZQV5 615 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 DCDC5Q6ZRR9 648 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 DNM1P46Q6ZS02 220 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 Q6ZTK2 550 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 CD177Q8N6Q3 437 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 DEFB108BQ8NET1 73 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 OR4M1Q8NGD0 313 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 OR5T2Q8NGG2 359 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 RAB3CQ96E17 227 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 NEDD4LQ96PU5 975 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 TMEM246Q9BRR3 403 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 ZNF665Q9H7R5 613 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.24□□□□□ -0.29
TMEM53-204ENST00000372243 KAAG1Q9UBP8 84 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 ABCA12Q86UK0 2595 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 ZNF44P15621 663 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 AMY2BP19961 511 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 NR4A2P43354 598 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 PLAC9Q5JTB6 97 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 TMEM69Q5SWH9 247 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 CLEC2AQ6UVW9 174 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 ZNF561Q8N587 486 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 C15orf40Q8WUR7 153 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 FAM168AQ92567 244 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 HECTD1Q9ULT8 2610 aa13.24□□□□□ -0.29
TMEM53-204ENST00000372243 TRAV24A0A0B4J272 114 aa13.23□□□□□ -0.29
TMEM53-204ENST00000372243 SLC33A1O00400 549 aaPredicted RBP13.23□□□□□ -0.29
TMEM53-204ENST00000372243 GYPAP02724 150 aa13.23□□□□□ -0.29
TMEM53-204ENST00000372243 GSTP1P09211 210 aaKnown RBP13.23□□□□□ -0.29
TMEM53-204ENST00000372243 HIST1H1DP16402 221 aaKnown RBP13.23□□□□□ -0.29
TMEM53-204ENST00000372243 PTBP1P26599 531 aaKnown RBP eCLIP13.23□□□□□ -0.29
TMEM53-204ENST00000372243 GABRA2P47869 451 aa13.23□□□□□ -0.29
TMEM53-204ENST00000372243 CEBPDP49716 269 aaPredicted RBP13.23□□□□□ -0.29
TMEM53-204ENST00000372243 COL10A1Q03692 680 aa13.23□□□□□ -0.29
TMEM53-204ENST00000372243 SCN1BQ07699 218 aa13.23□□□□□ -0.29
TMEM53-204ENST00000372243 RBM39Q14498 530 aaKnown RBP13.23□□□□□ -0.29
TMEM53-204ENST00000372243 PDCD1Q15116 288 aa13.23□□□□□ -0.29
TMEM53-204ENST00000372243 CARTPTQ16568 116 aa13.23□□□□□ -0.29
TMEM53-204ENST00000372243 SPANXN2Q5MJ10 180 aa13.23□□□□□ -0.29
TMEM53-204ENST00000372243 ATAD3CQ5T2N8 411 aa13.23□□□□□ -0.29
TMEM53-204ENST00000372243 SHEQ5VZ18 495 aa13.23□□□□□ -0.29
TMEM53-204ENST00000372243 SLC36A1Q7Z2H8 476 aa13.23□□□□□ -0.29
TMEM53-204ENST00000372243 SPICQ8N5J4 248 aa13.23□□□□□ -0.29
TMEM53-204ENST00000372243 C10orf105Q8TEF2 133 aa13.23□□□□□ -0.29
TMEM53-204ENST00000372243 MED30Q96HR3 178 aa13.23□□□□□ -0.29
TMEM53-204ENST00000372243 ARHGAP5-AS1Q96IT6 56 aa13.23□□□□□ -0.29
TMEM53-204ENST00000372243 GAFA1Q96PS6 74 aa13.23□□□□□ -0.29
TMEM53-204ENST00000372243 SOSTQ9BQB4 213 aa13.23□□□□□ -0.29
TMEM53-204ENST00000372243 PECRQ9BY49 303 aa13.23□□□□□ -0.29
TMEM53-204ENST00000372243 PLEKHJ1Q9NW61 149 aa13.23□□□□□ -0.29
TMEM53-204ENST00000372243 ZNF581Q9P0T4 197 aa13.23□□□□□ -0.29
TMEM53-204ENST00000372243 TRAV18A0A075B6X5 111 aa13.22□□□□□ -0.29
TMEM53-204ENST00000372243 FABP12A6NFH5 140 aa13.22□□□□□ -0.29
TMEM53-204ENST00000372243 NKX6-3A6NJ46 265 aa13.22□□□□□ -0.29
TMEM53-204ENST00000372243 SIRPB1O00241 398 aa13.22□□□□□ -0.29
TMEM53-204ENST00000372243 MFNGO00587 321 aa13.22□□□□□ -0.29
TMEM53-204ENST00000372243 SIGLEC5O15389 551 aa13.22□□□□□ -0.29
TMEM53-204ENST00000372243 ZNF737O75373 536 aa13.22□□□□□ -0.29
TMEM53-204ENST00000372243 TAS2R20P59543 309 aa13.22□□□□□ -0.29
TMEM53-204ENST00000372243 IL13RA1P78552 427 aa13.22□□□□□ -0.29
TMEM53-204ENST00000372243 ZNF260Q3ZCT1 412 aa13.22□□□□□ -0.29
TMEM53-204ENST00000372243 AVPI1Q5T686 147 aa13.22□□□□□ -0.29
TMEM53-204ENST00000372243 SUMF2Q8NBJ7 301 aa13.22□□□□□ -0.29
TMEM53-204ENST00000372243 PPP1R35Q8TAP8 253 aa13.22□□□□□ -0.29
TMEM53-204ENST00000372243 SNX22Q96L94 193 aa13.22□□□□□ -0.29
TMEM53-204ENST00000372243 PIMREGQ9BSJ6 248 aa13.22□□□□□ -0.29
TMEM53-204ENST00000372243 DPCDQ9BVM2 203 aaPredicted RBP13.22□□□□□ -0.29
TMEM53-204ENST00000372243 FAM234AQ9H0X4 552 aa13.22□□□□□ -0.29
TMEM53-204ENST00000372243 MAB21L2Q9Y586 359 aa13.22□□□□□ -0.29
TMEM53-204ENST00000372243 V9GYH0 126 aa13.22□□□□□ -0.29
TMEM53-204ENST00000372243 ANKRD17O75179 2603 aaKnown RBP13.22□□□□□ -0.29
TMEM53-204ENST00000372243 ISPDA4D126 451 aa13.21□□□□□ -0.29
TMEM53-204ENST00000372243 SERPINE3A8MV23 424 aa13.21□□□□□ -0.29
TMEM53-204ENST00000372243 VWC2LB2RUY7 222 aa13.21□□□□□ -0.29
TMEM53-204ENST00000372243 MCRIP1C9JLW8 97 aa13.21□□□□□ -0.29
TMEM53-204ENST00000372243 CA11O75493 328 aa13.21□□□□□ -0.29
TMEM53-204ENST00000372243 HLA-DQB1P01920 261 aa13.21□□□□□ -0.29
TMEM53-204ENST00000372243 CSN2P05814 226 aa13.21□□□□□ -0.29
TMEM53-204ENST00000372243 MELTFP08582 738 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms