RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 EML2O95834 649 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 POC1AQ8NBT0 407 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 OR10D3Q8NH80 312 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 SPANXA1Q9NS26 97 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 PSENENQ9NZ42 101 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 A0A0B4J2E0 115 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 A0A1B0GX12 115 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 GABRA1P14867 456 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 ZNF83P51522 516 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 GUCA2AQ02747 115 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 ISXQ2M1V0 245 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 GLI4P10075 376 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 TIGITQ495A1 244 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 STXBP6Q8NFX7 210 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 WNT1P04628 370 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 ZNF121P58317 390 aaPredicted RBP11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 RAC1P63000 192 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 C16orf47Q6ZP98 133 aaPredicted RBP11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 ARRDC1Q8N5I2 433 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 OR4C3Q8NH37 302 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 ALKBH7Q9BT30 221 aaPredicted RBP11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 TMEM191AQ9H0A3 160 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 SHARPINQ9H0F6 387 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 DNAJB12Q9NXW2 375 aaKnown RBP11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 FTH1P19P0C7X4 201 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 KHDC1LQ5JSQ8 128 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 SLC39A7Q92504 469 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 HGDQ93099 445 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 C1orf43Q9BWL3 253 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 FKBP11Q9NYL4 201 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 J3KRW8 73 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 OR5AL1P0C617 328 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 SSX1Q16384 188 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 SPATA46Q5T0L3 261 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 OR2W3Q7Z3T1 314 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 CISD2Q8N5K1 135 aaKnown RBP11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 RAB1CQ92928 201 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 ORAI1Q96D31 301 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 MARVELD1Q9BSK0 173 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 SLC6A13Q9NSD5 602 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 SPRY3O43610 288 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 RRASP10301 218 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 OPRM1P35372 400 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 OR1F12Q8NHA8 337 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 RTN4IP1Q8WWV3 396 aaPredicted RBP11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 RHOVQ96L33 236 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 SPACA5Q96QH8 159 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 RIMS4Q9H426 269 aaPredicted RBP11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 GFRA3O60609 400 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 CA1P00915 261 aaPredicted RBP11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 CST4P01036 141 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 C12orf54Q6X4T0 127 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 OR10AG1Q8NH19 301 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 PRR7Q8TB68 274 aa11.84□□□□□ -0.51
RAPGEF1-201ENST00000372189 PLPP2O43688 288 aa11.83□□□□□ -0.51
RAPGEF1-201ENST00000372189 LIMS3P0CW19 117 aa11.83□□□□□ -0.51
RAPGEF1-201ENST00000372189 LIMS4P0CW20 117 aa11.83□□□□□ -0.51
RAPGEF1-201ENST00000372189 NCMAPQ5T1S8 102 aa11.83□□□□□ -0.51
RAPGEF1-201ENST00000372189 OR2C3Q8N628 320 aa11.83□□□□□ -0.51
RAPGEF1-201ENST00000372189 FLRT3Q9NZU0 649 aa11.83□□□□□ -0.51
RAPGEF1-201ENST00000372189 KIAA1456Q9P272 454 aa11.83□□□□□ -0.51
RAPGEF1-201ENST00000372189 IAPPP10997 89 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 TNFRSF1AP19438 455 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 FPR2P25090 351 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 RPS27P42677 84 aaKnown RBP11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 PJVKQ0ZLH3 352 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 ELOBQ15370 118 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 DNASE2BQ8WZ79 361 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 MMP25Q9NPA2 562 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 A0A1W2PNV4 684 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 CT62P0C5K7 136 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 AREGP15514 252 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 ATF1P18846 271 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 TSPAN7P41732 249 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 GABRA6Q16445 453 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 ZNF429Q86V71 674 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 RAB24Q969Q5 203 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 OR5B21A6NL26 309 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 RGS13O14921 159 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 FBP1P09467 338 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 NPBWR2P48146 333 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 KIAA0040Q15053 153 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 ZNF528Q3MIS6 628 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 MRAPQ8TCY5 172 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 STARD4Q96DR4 205 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 WDR54Q9H977 334 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 LINC00518Q8N0U6 118 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 NRTNQ99748 197 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 TRIP11Q15643 1979 aa11.83□□□□□ -0.52
RAPGEF1-201ENST00000372189 RNF224P0DH78 156 aa11.82□□□□□ -0.52
RAPGEF1-201ENST00000372189 GALNSP34059 522 aa11.82□□□□□ -0.52
RAPGEF1-201ENST00000372189 AKR1C3P42330 323 aa11.82□□□□□ -0.52
RAPGEF1-201ENST00000372189 OTPQ5XKR4 325 aa11.82□□□□□ -0.52
RAPGEF1-201ENST00000372189 RASL10BQ96S79 203 aa11.82□□□□□ -0.52
RAPGEF1-201ENST00000372189 PLEKHB1Q9UF11 243 aaPredicted RBP11.82□□□□□ -0.52
RAPGEF1-201ENST00000372189 DMRT1Q9Y5R6 373 aa11.82□□□□□ -0.52
RAPGEF1-201ENST00000372189 GPR31O00270 319 aa11.82□□□□□ -0.52
RAPGEF1-201ENST00000372189 WNT3P56703 355 aa11.82□□□□□ -0.52
RAPGEF1-201ENST00000372189 MESP2Q0VG99 397 aa11.82□□□□□ -0.52
RAPGEF1-201ENST00000372189 SMIM21Q3B7S5 101 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms