RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 FKBP14Q9NWM8 211 aa15.42■□□□□ 0.06
CKS1B-203ENST00000368439 TAS2R4Q9NYW5 299 aa15.42■□□□□ 0.06
CKS1B-203ENST00000368439 GSTK1Q9Y2Q3 226 aa15.42■□□□□ 0.06
CKS1B-203ENST00000368439 KIAA2026Q5HYC2 2103 aa15.41■□□□□ 0.06
CKS1B-203ENST00000368439 TRBV5-5A0A0J9YX44 114 aa15.41■□□□□ 0.06
CKS1B-203ENST00000368439 EFCAB10A6NFE3 127 aa15.41■□□□□ 0.06
CKS1B-203ENST00000368439 SIRPB1O00241 398 aa15.41■□□□□ 0.06
CKS1B-203ENST00000368439 GABRPO00591 440 aa15.41■□□□□ 0.06
CKS1B-203ENST00000368439 MGST3O14880 152 aa15.41■□□□□ 0.06
CKS1B-203ENST00000368439 RBP4P02753 201 aa15.41■□□□□ 0.06
CKS1B-203ENST00000368439 ZNF728P0DKX0 622 aa15.41■□□□□ 0.06
CKS1B-203ENST00000368439 GABRR1P24046 479 aa15.41■□□□□ 0.06
CKS1B-203ENST00000368439 BMXP51813 675 aa15.41■□□□□ 0.06
CKS1B-203ENST00000368439 RPS11P62280 158 aaKnown RBP eCLIP15.41■□□□□ 0.06
CKS1B-203ENST00000368439 GABPB1Q06547 395 aaPredicted RBP15.41■□□□□ 0.06
CKS1B-203ENST00000368439 EDDM3AQ14507 147 aa15.41■□□□□ 0.06
CKS1B-203ENST00000368439 ZNF782Q6ZMW2 699 aaPredicted RBP15.41■□□□□ 0.06
CKS1B-203ENST00000368439 OR13C5Q8NGS8 318 aa15.41■□□□□ 0.06
CKS1B-203ENST00000368439 TMEM106AQ96A25 262 aa15.41■□□□□ 0.06
CKS1B-203ENST00000368439 PGLYRP3Q96LB9 341 aa15.41■□□□□ 0.06
CKS1B-203ENST00000368439 MEGF9Q9H1U4 602 aa15.41■□□□□ 0.06
CKS1B-203ENST00000368439 ZNF281Q9Y2X9 895 aa15.41■□□□□ 0.06
CKS1B-203ENST00000368439 TRRAPQ9Y4A5 3859 aa15.41■□□□□ 0.06
CKS1B-203ENST00000368439 NBEAL1Q6ZS30 2694 aa15.4■□□□□ 0.06
CKS1B-203ENST00000368439 hCG_1809904A0A1W2PP81 198 aa15.4■□□□□ 0.06
CKS1B-203ENST00000368439 A0A1W2PPE2 198 aa15.4■□□□□ 0.06
CKS1B-203ENST00000368439 A0A1W2PR64 198 aa15.4■□□□□ 0.06
CKS1B-203ENST00000368439 A0A1W2PRV1 198 aa15.4■□□□□ 0.06
CKS1B-203ENST00000368439 POM121CA8CG34 1229 aa15.4■□□□□ 0.06
CKS1B-203ENST00000368439 SH2D1BO14796 132 aa15.4■□□□□ 0.06
CKS1B-203ENST00000368439 ALDOBP05062 364 aa15.4■□□□□ 0.06
CKS1B-203ENST00000368439 TMEM225BP0DP42 221 aa15.4■□□□□ 0.06
CKS1B-203ENST00000368439 ERP29P30040 261 aaKnown RBP15.4■□□□□ 0.06
CKS1B-203ENST00000368439 C21orf33P30042 268 aaPredicted RBP15.4■□□□□ 0.06
CKS1B-203ENST00000368439 RAG2P55895 527 aa15.4■□□□□ 0.06
CKS1B-203ENST00000368439 MED21Q13503 144 aa15.4■□□□□ 0.06
CKS1B-203ENST00000368439 ELP2Q6IA86 826 aa15.4■□□□□ 0.06
CKS1B-203ENST00000368439 ASCL4Q6XD76 172 aa15.4■□□□□ 0.06
CKS1B-203ENST00000368439 ZFP41Q8N8Y5 198 aa15.4■□□□□ 0.06
CKS1B-203ENST00000368439 PXT1Q8NFP0 134 aa15.4■□□□□ 0.06
CKS1B-203ENST00000368439 GHSRQ92847 366 aa15.4■□□□□ 0.06
CKS1B-203ENST00000368439 ORAI1Q96D31 301 aa15.4■□□□□ 0.06
CKS1B-203ENST00000368439 EXOSC4Q9NPD3 245 aaKnown RBP15.4■□□□□ 0.06
CKS1B-203ENST00000368439 GLS2Q9UI32 602 aa15.4■□□□□ 0.06
CKS1B-203ENST00000368439 VPREB3Q9UKI3 123 aa15.4■□□□□ 0.06
CKS1B-203ENST00000368439 LINC00312Q9Y6C7 94 aa15.4■□□□□ 0.06
CKS1B-203ENST00000368439 A0A0G2JK05 382 aa15.39■□□□□ 0.05
CKS1B-203ENST00000368439 hADV38S2A0JD32 116 aa15.39■□□□□ 0.05
CKS1B-203ENST00000368439 FAM90A8PA6NJQ4 464 aa15.39■□□□□ 0.05
CKS1B-203ENST00000368439 PAHP00439 452 aa15.39■□□□□ 0.05
CKS1B-203ENST00000368439 CRYBA1P05813 215 aa15.39■□□□□ 0.05
CKS1B-203ENST00000368439 CD2P06729 351 aa15.39■□□□□ 0.05
CKS1B-203ENST00000368439 IGHV1-8P0DP01 117 aa15.39■□□□□ 0.05
CKS1B-203ENST00000368439 IGFBP3P17936 291 aaPredicted RBP15.39■□□□□ 0.05
CKS1B-203ENST00000368439 COX7A1P24310 79 aa15.39■□□□□ 0.05
CKS1B-203ENST00000368439 SHISA2Q6UWI4 295 aa15.39■□□□□ 0.05
CKS1B-203ENST00000368439 AHSA2Q719I0 299 aa15.39■□□□□ 0.05
CKS1B-203ENST00000368439 Q8NFD4 153 aa15.39■□□□□ 0.05
CKS1B-203ENST00000368439 BPIFB6Q8NFQ5 453 aa15.39■□□□□ 0.05
CKS1B-203ENST00000368439 ZNF714Q96N38 554 aa15.39■□□□□ 0.05
CKS1B-203ENST00000368439 VCXQ9H320 206 aa15.39■□□□□ 0.05
CKS1B-203ENST00000368439 CHCHD3Q9NX63 227 aaKnown RBP15.39■□□□□ 0.05
CKS1B-203ENST00000368439 ODF3BA8MYP8 253 aa15.38■□□□□ 0.05
CKS1B-203ENST00000368439 SLC33A1O00400 549 aaPredicted RBP15.38■□□□□ 0.05
CKS1B-203ENST00000368439 GPX5O75715 221 aa15.38■□□□□ 0.05
CKS1B-203ENST00000368439 PAX6P26367 422 aa15.38■□□□□ 0.05
CKS1B-203ENST00000368439 MTNR1BP49286 362 aa15.38■□□□□ 0.05
CKS1B-203ENST00000368439 AQP4P55087 323 aa15.38■□□□□ 0.05
CKS1B-203ENST00000368439 P2RX3P56373 397 aa15.38■□□□□ 0.05
CKS1B-203ENST00000368439 LDLRAD2Q5SZI1 272 aa15.38■□□□□ 0.05
CKS1B-203ENST00000368439 GDPGP1Q6ZNW5 385 aa15.38■□□□□ 0.05
CKS1B-203ENST00000368439 OR11H6Q8NGC7 330 aa15.38■□□□□ 0.05
CKS1B-203ENST00000368439 OR4F5Q8NH21 305 aa15.38■□□□□ 0.05
CKS1B-203ENST00000368439 PPP1R35Q8TAP8 253 aa15.38■□□□□ 0.05
CKS1B-203ENST00000368439 NKX3-1Q99801 234 aaPredicted RBP15.38■□□□□ 0.05
CKS1B-203ENST00000368439 SLITRK2Q9H156 845 aa15.38■□□□□ 0.05
CKS1B-203ENST00000368439 A0A1B0GUS0 222 aa15.37■□□□□ 0.05
CKS1B-203ENST00000368439 H0YJX3 145 aa15.37■□□□□ 0.05
CKS1B-203ENST00000368439 CSN2P05814 226 aa15.37■□□□□ 0.05
CKS1B-203ENST00000368439 AANATQ16613 207 aa15.37■□□□□ 0.05
CKS1B-203ENST00000368439 Q499Y3 187 aa15.37■□□□□ 0.05
CKS1B-203ENST00000368439 YIF1BQ5BJH7 314 aa15.37■□□□□ 0.05
CKS1B-203ENST00000368439 ZNF626Q68DY1 528 aa15.37■□□□□ 0.05
CKS1B-203ENST00000368439 LHFPL4Q7Z7J7 247 aa15.37■□□□□ 0.05
CKS1B-203ENST00000368439 SATL1Q86VE3 508 aa15.37■□□□□ 0.05
CKS1B-203ENST00000368439 DYNAPQ8N1N2 210 aa15.37■□□□□ 0.05
CKS1B-203ENST00000368439 STX19Q8N4C7 294 aa15.37■□□□□ 0.05
CKS1B-203ENST00000368439 NANOGP1Q8N7R0 232 aa15.37■□□□□ 0.05
CKS1B-203ENST00000368439 CHST4Q8NCG5 386 aa15.37■□□□□ 0.05
CKS1B-203ENST00000368439 OR51T1Q8NGJ9 327 aa15.37■□□□□ 0.05
CKS1B-203ENST00000368439 OR5R1Q8NH85 324 aa15.37■□□□□ 0.05
CKS1B-203ENST00000368439 TNFAIP8L1Q8WVP5 186 aa15.37■□□□□ 0.05
CKS1B-203ENST00000368439 COQ2Q96H96 371 aa15.37■□□□□ 0.05
CKS1B-203ENST00000368439 SSX3Q99909 188 aa15.37■□□□□ 0.05
CKS1B-203ENST00000368439 PPA2Q9H2U2 334 aa15.37■□□□□ 0.05
CKS1B-203ENST00000368439 BEX1Q9HBH7 125 aa15.37■□□□□ 0.05
CKS1B-203ENST00000368439 TMEM138Q9NPI0 162 aa15.37■□□□□ 0.05
CKS1B-203ENST00000368439 TRBV5-7A0A0A0MS05 114 aa15.36■□□□□ 0.05
CKS1B-203ENST00000368439 MEGF11A6BM72 1044 aa15.36■□□□□ 0.05
CKS1B-203ENST00000368439 H3BUX3 64 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms