RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 RDH5Q92781 318 aa17.32■□□□□ 0.36
SHISA4-201ENST00000362011 CXorf56Q9H5V9 222 aa17.32■□□□□ 0.36
SHISA4-201ENST00000362011 DCAF16Q9NXF7 216 aa17.32■□□□□ 0.36
SHISA4-201ENST00000362011 NLKQ9UBE8 527 aa17.32■□□□□ 0.36
SHISA4-201ENST00000362011 SH2D1BO14796 132 aa17.31■□□□□ 0.36
SHISA4-201ENST00000362011 HIST1H1DP16402 221 aaKnown RBP17.31■□□□□ 0.36
SHISA4-201ENST00000362011 DUSP1P28562 367 aa17.31■□□□□ 0.36
SHISA4-201ENST00000362011 TMEM50BP56557 158 aa17.31■□□□□ 0.36
SHISA4-201ENST00000362011 MRPS11P82912 194 aaKnown RBP17.31■□□□□ 0.36
SHISA4-201ENST00000362011 ARL6IP1Q15041 203 aa17.31■□□□□ 0.36
SHISA4-201ENST00000362011 PDCD1Q15116 288 aa17.31■□□□□ 0.36
SHISA4-201ENST00000362011 PYDC2Q56P42 97 aa17.31■□□□□ 0.36
SHISA4-201ENST00000362011 SIGIRRQ6IA17 410 aa17.31■□□□□ 0.36
SHISA4-201ENST00000362011 Q6ZTK2 550 aa17.31■□□□□ 0.36
SHISA4-201ENST00000362011 SNX29P2Q8IUI4 249 aa17.31■□□□□ 0.36
SHISA4-201ENST00000362011 YIPF5Q969M3 257 aa17.31■□□□□ 0.36
SHISA4-201ENST00000362011 SEH1LQ96EE3 360 aa17.31■□□□□ 0.36
SHISA4-201ENST00000362011 NEDD4LQ96PU5 975 aa17.31■□□□□ 0.36
SHISA4-201ENST00000362011 PECRQ9BY49 303 aa17.31■□□□□ 0.36
SHISA4-201ENST00000362011 SRRQ9GZT4 340 aa17.31■□□□□ 0.36
SHISA4-201ENST00000362011 GSX1Q9H4S2 264 aaPredicted RBP17.31■□□□□ 0.36
SHISA4-201ENST00000362011 OR14J1Q9UGF5 321 aa17.31■□□□□ 0.36
SHISA4-201ENST00000362011 PLEKHA6Q9Y2H5 1048 aa17.31■□□□□ 0.36
SHISA4-201ENST00000362011 WIPI2Q9Y4P8 454 aa17.31■□□□□ 0.36
SHISA4-201ENST00000362011 AKAP6Q13023 2319 aa17.31■□□□□ 0.36
SHISA4-201ENST00000362011 IGHV3OR15-7A0A075B7D8 119 aa17.3■□□□□ 0.36
SHISA4-201ENST00000362011 PDCD6O75340 191 aa17.3■□□□□ 0.36
SHISA4-201ENST00000362011 HAND1O96004 215 aa17.3■□□□□ 0.36
SHISA4-201ENST00000362011 HLA-DQB1P01920 261 aa17.3■□□□□ 0.36
SHISA4-201ENST00000362011 GSTP1P09211 210 aaKnown RBP17.3■□□□□ 0.36
SHISA4-201ENST00000362011 DAOP14920 347 aa17.3■□□□□ 0.36
SHISA4-201ENST00000362011 FUT3P21217 361 aa17.3■□□□□ 0.36
SHISA4-201ENST00000362011 COL8A2P25067 703 aa17.3■□□□□ 0.36
SHISA4-201ENST00000362011 CHATP28329 748 aa17.3■□□□□ 0.36
SHISA4-201ENST00000362011 CD40LGP29965 261 aa17.3■□□□□ 0.36
SHISA4-201ENST00000362011 PPP5CP53041 499 aa17.3■□□□□ 0.36
SHISA4-201ENST00000362011 SCN1BQ07699 218 aa17.3■□□□□ 0.36
SHISA4-201ENST00000362011 ZNF260Q3ZCT1 412 aa17.3■□□□□ 0.36
SHISA4-201ENST00000362011 NKAPLQ5M9Q1 402 aa17.3■□□□□ 0.36
SHISA4-201ENST00000362011 FAM201AQ5SY85 155 aa17.3■□□□□ 0.36
SHISA4-201ENST00000362011 ATAD3CQ5T2N8 411 aa17.3■□□□□ 0.36
SHISA4-201ENST00000362011 Q6P435 159 aa17.3■□□□□ 0.36
SHISA4-201ENST00000362011 ARHGAP5-AS1Q96IT6 56 aa17.3■□□□□ 0.36
SHISA4-201ENST00000362011 AUNIPQ9H7T9 357 aa17.3■□□□□ 0.36
SHISA4-201ENST00000362011 IFT22Q9H7X7 185 aa17.3■□□□□ 0.36
SHISA4-201ENST00000362011 SPACA1Q9HBV2 294 aa17.3■□□□□ 0.36
SHISA4-201ENST00000362011 PLEKHJ1Q9NW61 149 aa17.3■□□□□ 0.36
SHISA4-201ENST00000362011 ZNF581Q9P0T4 197 aa17.3■□□□□ 0.36
SHISA4-201ENST00000362011 HSF4Q9ULV5 492 aa17.3■□□□□ 0.36
SHISA4-201ENST00000362011 DSCAML1Q8TD84 2053 aa17.29■□□□□ 0.36
SHISA4-201ENST00000362011 OOEPA6NGQ2 149 aa17.29■□□□□ 0.36
SHISA4-201ENST00000362011 LGALS8O00214 317 aa17.29■□□□□ 0.36
SHISA4-201ENST00000362011 DEGS1O15121 323 aa17.29■□□□□ 0.36
SHISA4-201ENST00000362011 CTDSPLO15194 276 aa17.29■□□□□ 0.36
SHISA4-201ENST00000362011 ZNF44P15621 663 aa17.29■□□□□ 0.36
SHISA4-201ENST00000362011 MUC1P15941 1255 aaPredicted RBP17.29■□□□□ 0.36
SHISA4-201ENST00000362011 GNB3P16520 340 aa17.29■□□□□ 0.36
SHISA4-201ENST00000362011 EFNA4P52798 201 aa17.29■□□□□ 0.36
SHISA4-201ENST00000362011 CDNFQ49AH0 187 aa17.29■□□□□ 0.36
SHISA4-201ENST00000362011 PLAC9Q5JTB6 97 aa17.29■□□□□ 0.36
SHISA4-201ENST00000362011 TEX36Q5VZQ5 186 aa17.29■□□□□ 0.36
SHISA4-201ENST00000362011 SFRP4Q6FHJ7 346 aaPredicted RBP17.29■□□□□ 0.36
SHISA4-201ENST00000362011 GDPD1Q8N9F7 314 aa17.29■□□□□ 0.36
SHISA4-201ENST00000362011 C19orf18Q8NEA5 215 aa17.29■□□□□ 0.36
SHISA4-201ENST00000362011 ABHD1Q96SE0 405 aa17.29■□□□□ 0.36
SHISA4-201ENST00000362011 SEBOXQ9HB31 216 aaPredicted RBP17.29■□□□□ 0.36
SHISA4-201ENST00000362011 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.29■□□□□ 0.36
SHISA4-201ENST00000362011 RCC2Q9P258 522 aaKnown RBP17.29■□□□□ 0.36
SHISA4-201ENST00000362011 VPS13CQ709C8 3753 aa17.29■□□□□ 0.36
SHISA4-201ENST00000362011 DOCK11Q5JSL3 2073 aa17.28■□□□□ 0.36
SHISA4-201ENST00000362011 PPIAL4EA0A075B759 164 aa17.28■□□□□ 0.36
SHISA4-201ENST00000362011 TRAV38-1A0A0B4J264 116 aa17.28■□□□□ 0.36
SHISA4-201ENST00000362011 RFPL4AA6NLU0 287 aa17.28■□□□□ 0.36
SHISA4-201ENST00000362011 OR2AT4A6NND4 320 aa17.28■□□□□ 0.36
SHISA4-201ENST00000362011 PPIAL4DF5H284 164 aa17.28■□□□□ 0.36
SHISA4-201ENST00000362011 RFPL4AL1F8VTS6 287 aa17.28■□□□□ 0.36
SHISA4-201ENST00000362011 LYNX1G3V0Z9 82 aa17.28■□□□□ 0.36
SHISA4-201ENST00000362011 J3QRK9 145 aa17.28■□□□□ 0.36
SHISA4-201ENST00000362011 MFNGO00587 321 aa17.28■□□□□ 0.36
SHISA4-201ENST00000362011 RP2O75695 350 aa17.28■□□□□ 0.36
SHISA4-201ENST00000362011 LY6HO94772 140 aa17.28■□□□□ 0.36
SHISA4-201ENST00000362011 OR2H2O95918 312 aa17.28■□□□□ 0.36
SHISA4-201ENST00000362011 F12P00748 615 aaPredicted RBP17.28■□□□□ 0.36
SHISA4-201ENST00000362011 PPIAL4FP0DN26 164 aa17.28■□□□□ 0.36
SHISA4-201ENST00000362011 LYNX1P0DP58 116 aa17.28■□□□□ 0.36
SHISA4-201ENST00000362011 PSG2P11465 335 aa17.28■□□□□ 0.36
SHISA4-201ENST00000362011 DNASE1P24855 282 aa17.28■□□□□ 0.36
SHISA4-201ENST00000362011 CEBPDP49716 269 aaPredicted RBP17.28■□□□□ 0.36
SHISA4-201ENST00000362011 MRPS10P82664 201 aaKnown RBP17.28■□□□□ 0.36
SHISA4-201ENST00000362011 MICBQ29980 383 aa17.28■□□□□ 0.36
SHISA4-201ENST00000362011 C6orf201Q7Z4U5 140 aa17.28■□□□□ 0.36
SHISA4-201ENST00000362011 RTN4RL2Q86UN3 420 aa17.28■□□□□ 0.36
SHISA4-201ENST00000362011 ZMAT3Q9HA38 289 aaKnown RBP17.28■□□□□ 0.36
SHISA4-201ENST00000362011 EDARQ9UNE0 448 aa17.28■□□□□ 0.36
SHISA4-201ENST00000362011 PPIAL4AQ9Y536 164 aa17.28■□□□□ 0.36
SHISA4-201ENST00000362011 USF3Q68DE3 2245 aa17.28■□□□□ 0.36
SHISA4-201ENST00000362011 TMEM235A6NFC5 223 aa17.27■□□□□ 0.36
SHISA4-201ENST00000362011 SIRPB1O00241 398 aa17.27■□□□□ 0.36
SHISA4-201ENST00000362011 ZNF205O95201 554 aa17.27■□□□□ 0.36
SHISA4-201ENST00000362011 GABRA2P47869 451 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms