RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 OR6F1Q8NGZ6 308 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 EMG1Q92979 244 aaKnown RBP2.41□□□□□ -2.02
LTN1-201ENST00000361371 FOXRED1Q96CU9 486 aaPredicted RBP2.41□□□□□ -2.02
LTN1-201ENST00000361371 PIK3IP1Q96FE7 263 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 RYDENQ9NUL5 291 aaKnown RBP2.41□□□□□ -2.02
LTN1-201ENST00000361371 PLEKHJ1Q9NW61 149 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 DOCK7Q96N67 2140 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 IGLV3-9A0A075B6K5 115 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 IGKV1D-17A0A075B6S4 117 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 hCG_1807616A0A1W2PRN6 198 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 DEFB108AA8MXU0 73 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 CDK2AP1O14519 115 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 NDUFB6O95139 128 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 OR2H2O95918 312 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 CD74P04233 296 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 GNG3P63215 75 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 DYRK1AQ13627 763 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 GNMTQ14749 295 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 LTC4SQ16873 150 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 IZUMO4Q1ZYL8 232 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 ZNF718Q3SXZ3 478 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 Q6P435 159 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 CSNK2A3Q8NEV1 391 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 NANOS1Q8WY41 292 aaKnown RBP2.41□□□□□ -2.02
LTN1-201ENST00000361371 BOD1Q96IK1 185 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 OR2V2Q96R30 315 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 S100A13Q99584 98 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 CHIAQ9BZP6 476 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 RGCCQ9H4X1 137 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 DNAJB11Q9UBS4 358 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 SLC7A11Q9UPY5 501 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 PCNX1Q96RV3 2341 aa2.41□□□□□ -2.02
LTN1-201ENST00000361371 ABCA12Q86UK0 2595 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 MMP23AO75900 390 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 CCNKO75909 580 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 SNAPINO95295 136 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 SOD3P08294 240 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 OR5H8P0DN80 308 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 RPA2P15927 270 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 MPZP25189 248 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 SF3B4Q15427 424 aaKnown RBP eCLIP2.4□□□□□ -2.022e-6■■■■■ 33.9
LTN1-201ENST00000361371 MST1LQ2TV78 715 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 AADACL3Q5VUY0 350 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 HACD4Q5VWC8 232 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 CDH24Q86UP0 819 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 FAM90A1Q86YD7 464 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 MKXQ8IYA7 352 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 ST6GALNAC3Q8NDV1 305 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 PXT1Q8NFP0 134 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 ITLN2Q8WWU7 325 aaPredicted RBP2.4□□□□□ -2.02
LTN1-201ENST00000361371 LEAP2Q969E1 77 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 CMSS1Q9BQ75 279 aaKnown RBP2.4□□□□□ -2.02
LTN1-201ENST00000361371 URM1Q9BTM9 101 aaKnown RBP2.4□□□□□ -2.02
LTN1-201ENST00000361371 TM2D1Q9BX74 207 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 TAAR3PQ9P1P4 343 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 EIF3KQ9UBQ5 218 aaKnown RBP2.4□□□□□ -2.02
LTN1-201ENST00000361371 MPC1Q9Y5U8 109 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 USP9YO00507 2555 aaPredicted RBP2.4□□□□□ -2.02
LTN1-201ENST00000361371 C7orf66A4D0T2 115 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 METTL21EPA6NDL7 271 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 ZNF736B4DX44 427 aaPredicted RBP2.4□□□□□ -2.02
LTN1-201ENST00000361371 BET1O15155 118 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 PDCD6O75340 191 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 ERCC1P07992 297 aaPredicted RBP2.4□□□□□ -2.02
LTN1-201ENST00000361371 CHRM2P08172 466 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 FUT3P21217 361 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 PAX6P26367 422 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 GCH1P30793 250 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 HOXC12P31275 282 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 H2BFSP57053 126 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 CNN3Q15417 329 aaKnown RBP2.4□□□□□ -2.02
LTN1-201ENST00000361371 ZNF660Q6AZW8 331 aaPredicted RBP2.4□□□□□ -2.02
LTN1-201ENST00000361371 ZNF782Q6ZMW2 699 aaPredicted RBP2.4□□□□□ -2.02
LTN1-201ENST00000361371 OVCH2Q7RTZ1 564 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 OR2W3Q7Z3T1 314 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 SUMF2Q8NBJ7 301 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 C1orf162Q8NEQ5 155 aaPredicted RBP2.4□□□□□ -2.02
LTN1-201ENST00000361371 STEAP2Q8NFT2 490 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 OR13A1Q8NGR1 328 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 TMEM100Q9NV29 134 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 PIPOXQ9P0Z9 390 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 ATP23Q9Y6H3 246 aa2.4□□□□□ -2.02
LTN1-201ENST00000361371 FREM3P0C091 2139 aa2.4□□□□□ -2.03
LTN1-201ENST00000361371 A1L4Q6 167 aa2.4□□□□□ -2.03
LTN1-201ENST00000361371 SLC33A1O00400 549 aaPredicted RBP2.4□□□□□ -2.03
LTN1-201ENST00000361371 KNG1P01042 644 aa2.4□□□□□ -2.03
LTN1-201ENST00000361371 CD8AP01732 235 aa2.4□□□□□ -2.03
LTN1-201ENST00000361371 LPLP06858 475 aa2.4□□□□□ -2.03
LTN1-201ENST00000361371 CDKN1AP38936 164 aa2.4□□□□□ -2.03
LTN1-201ENST00000361371 FXYD4P59646 89 aa2.4□□□□□ -2.03
LTN1-201ENST00000361371 SUPT4H1P63272 117 aaKnown RBP2.4□□□□□ -2.03
LTN1-201ENST00000361371 TFF3Q07654 80 aa2.4□□□□□ -2.03
LTN1-201ENST00000361371 AESQ08117 197 aa2.4□□□□□ -2.03
LTN1-201ENST00000361371 PPP1R1AQ13522 171 aa2.4□□□□□ -2.03
LTN1-201ENST00000361371 SLC9A3R2Q15599 337 aa2.4□□□□□ -2.03
LTN1-201ENST00000361371 OR8G1Q15617 311 aa2.4□□□□□ -2.03
LTN1-201ENST00000361371 NUP210LQ5VU65 1888 aa2.4□□□□□ -2.03
LTN1-201ENST00000361371 LYPD2Q6UXB3 125 aa2.4□□□□□ -2.03
LTN1-201ENST00000361371 HOGA1Q86XE5 327 aa2.4□□□□□ -2.03
LTN1-201ENST00000361371 FAM58AQ8N1B3 248 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms