RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 ZFHX2Q9C0A1 2572 aaPredicted RBP12.09□□□□□ -0.47
CTR9-201ENST00000361367 TMEM210A6NLX4 147 aa12.09□□□□□ -0.47
CTR9-201ENST00000361367 ZIC3O60481 467 aa12.09□□□□□ -0.47
CTR9-201ENST00000361367 RAMP1O60894 148 aa12.09□□□□□ -0.47
CTR9-201ENST00000361367 GLDNQ6ZMI3 551 aaPredicted RBP12.09□□□□□ -0.47
CTR9-201ENST00000361367 TMEM171Q8WVE6 324 aa12.09□□□□□ -0.47
CTR9-201ENST00000361367 YIPF5Q969M3 257 aa12.09□□□□□ -0.47
CTR9-201ENST00000361367 GNB4Q9HAV0 340 aa12.09□□□□□ -0.47
CTR9-201ENST00000361367 FCGR3BO75015 233 aa12.09□□□□□ -0.47
CTR9-201ENST00000361367 JTBO76095 146 aa12.09□□□□□ -0.47
CTR9-201ENST00000361367 IGFBP7Q16270 282 aa12.09□□□□□ -0.47
CTR9-201ENST00000361367 THNSL2Q86YJ6 484 aa12.09□□□□□ -0.47
CTR9-201ENST00000361367 MAP6Q96JE9 813 aa12.09□□□□□ -0.47
CTR9-201ENST00000361367 SFXN3Q9BWM7 321 aa12.09□□□□□ -0.47
CTR9-201ENST00000361367 ARV1Q9H2C2 271 aa12.09□□□□□ -0.47
CTR9-201ENST00000361367 SPNP16150 400 aa12.08□□□□□ -0.48
CTR9-201ENST00000361367 CBR1P16152 277 aa12.08□□□□□ -0.48
CTR9-201ENST00000361367 PIGYQ3MUY2 71 aa12.08□□□□□ -0.48
CTR9-201ENST00000361367 SLC7A5P1Q8MH63 180 aa12.08□□□□□ -0.48
CTR9-201ENST00000361367 BORCS7Q96B45 105 aa12.08□□□□□ -0.48
CTR9-201ENST00000361367 OR2D2Q9H210 308 aa12.08□□□□□ -0.48
CTR9-201ENST00000361367 RPS10P5Q9NQ39 176 aa12.08□□□□□ -0.48
CTR9-201ENST00000361367 LSM2Q9Y333 95 aaKnown RBP12.08□□□□□ -0.48
CTR9-201ENST00000361367 PLXNA3P51805 1871 aa12.08□□□□□ -0.48
CTR9-201ENST00000361367 CD1AP06126 327 aa12.08□□□□□ -0.48
CTR9-201ENST00000361367 ERGIC1Q969X5 290 aa12.08□□□□□ -0.48
CTR9-201ENST00000361367 HEATR5BQ9P2D3 2071 aa12.08□□□□□ -0.48
CTR9-201ENST00000361367 H3BP45 60 aa12.08□□□□□ -0.48
CTR9-201ENST00000361367 HRASP01112 189 aa12.08□□□□□ -0.48
CTR9-201ENST00000361367 SUCLG1P53597 346 aaKnown RBP12.08□□□□□ -0.48
CTR9-201ENST00000361367 GABRA6Q16445 453 aa12.08□□□□□ -0.48
CTR9-201ENST00000361367 LINC01590Q5TEZ4 76 aa12.08□□□□□ -0.48
CTR9-201ENST00000361367 PSENENQ9NZ42 101 aa12.08□□□□□ -0.48
CTR9-201ENST00000361367 TIMM8BQ9Y5J9 83 aaPredicted RBP12.08□□□□□ -0.48
CTR9-201ENST00000361367 ANKRD20A5PA0PJZ0 165 aa12.08□□□□□ -0.48
CTR9-201ENST00000361367 NCBP2LA6PVI3 153 aaKnown RBP12.08□□□□□ -0.48
CTR9-201ENST00000361367 PRSS44E7EML9 344 aa12.08□□□□□ -0.48
CTR9-201ENST00000361367 TAAR5O14804 337 aa12.08□□□□□ -0.48
CTR9-201ENST00000361367 SULT1A3P0DMM9 295 aa12.08□□□□□ -0.48
CTR9-201ENST00000361367 SULT1A4P0DMN0 295 aa12.08□□□□□ -0.48
CTR9-201ENST00000361367 OR8B3Q8NGG8 313 aa12.08□□□□□ -0.48
CTR9-201ENST00000361367 WDR89Q96FK6 387 aaPredicted RBP12.08□□□□□ -0.48
CTR9-201ENST00000361367 OR8B2Q96RD0 313 aa12.08□□□□□ -0.48
CTR9-201ENST00000361367 MUC6Q6W4X9 2439 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 CLEC18AA5D8T8 446 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 DHRS2Q13268 280 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 PPP1R1AQ13522 171 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 RTP5Q14D33 572 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 UBAC2Q8NBM4 344 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 CLEC18CQ8NCF0 446 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 POC1BQ8TC44 478 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 SFT2D1Q8WV19 159 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 ZNF665Q9H7R5 613 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 GPR27Q9NS67 375 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 GZMHP20718 246 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 PRRX1P54821 245 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 TESK1Q15569 626 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 FAM122BQ7Z309 247 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 MIXL1Q9H2W2 232 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 AK3Q9UIJ7 227 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 RFPL4AA6NLU0 287 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 RFPL4AL1F8VTS6 287 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 KLF4O43474 513 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 CRHP06850 196 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 BTNL3Q6UXE8 466 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 ADAMTS17Q8TE56 1095 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 FBLIM1Q8WUP2 373 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 CORO2AQ92828 525 aa12.07□□□□□ -0.48
CTR9-201ENST00000361367 DAZAP1Q96EP5 407 aaKnown RBP12.07□□□□□ -0.48
CTR9-201ENST00000361367 PARP12Q9H0J9 701 aaKnown RBP12.07□□□□□ -0.48
CTR9-201ENST00000361367 LIPGQ9Y5X9 500 aa12.06□□□□□ -0.48
CTR9-201ENST00000361367 RALGAPA1Q6GYQ0 2036 aa12.06□□□□□ -0.48
CTR9-201ENST00000361367 TRDCB7Z8K6 153 aa12.06□□□□□ -0.48
CTR9-201ENST00000361367 RPL11P62913 178 aaKnown RBP12.06□□□□□ -0.48
CTR9-201ENST00000361367 CEACAM21Q3KPI0 293 aa12.06□□□□□ -0.48
CTR9-201ENST00000361367 FADS6Q8N9I5 356 aa12.06□□□□□ -0.48
CTR9-201ENST00000361367 OR14K1Q8NGZ2 314 aa12.06□□□□□ -0.48
CTR9-201ENST00000361367 GNPNAT1Q96EK6 184 aaPredicted RBP12.06□□□□□ -0.48
CTR9-201ENST00000361367 POM121L2Q96KW2 1035 aa12.06□□□□□ -0.48
CTR9-201ENST00000361367 ZNF488Q96MN9 340 aa12.06□□□□□ -0.48
CTR9-201ENST00000361367 PURGQ9UJV8 347 aaKnown RBP12.06□□□□□ -0.48
CTR9-201ENST00000361367 POLEQ07864 2286 aa12.06□□□□□ -0.48
CTR9-201ENST00000361367 CA11O75493 328 aa12.06□□□□□ -0.48
CTR9-201ENST00000361367 LPAR6P43657 344 aa12.06□□□□□ -0.48
CTR9-201ENST00000361367 TMED6Q8WW62 240 aa12.06□□□□□ -0.48
CTR9-201ENST00000361367 GP6Q9HCN6 339 aa12.06□□□□□ -0.48
CTR9-201ENST00000361367 TMED3Q9Y3Q3 217 aa12.06□□□□□ -0.48
CTR9-201ENST00000361367 ATP6V1G2-DDX39BF2Z307 99 aa12.06□□□□□ -0.48
CTR9-201ENST00000361367 IGHMP01871 453 aa12.06□□□□□ -0.48
CTR9-201ENST00000361367 CEACAM3P40198 252 aa12.06□□□□□ -0.48
CTR9-201ENST00000361367 RAG2P55895 527 aa12.06□□□□□ -0.48
CTR9-201ENST00000361367 KCNRGQ8N5I3 272 aa12.06□□□□□ -0.48
CTR9-201ENST00000361367 RAXQ9Y2V3 346 aa12.06□□□□□ -0.48
CTR9-201ENST00000361367 MDC1Q14676 2089 aaKnown RBP12.05□□□□□ -0.48
CTR9-201ENST00000361367 OOEPA6NGQ2 149 aa12.05□□□□□ -0.48
CTR9-201ENST00000361367 AQP7O14520 342 aa12.05□□□□□ -0.48
CTR9-201ENST00000361367 CTDSPLO15194 276 aa12.05□□□□□ -0.48
CTR9-201ENST00000361367 EFNB2P52799 333 aa12.05□□□□□ -0.48
CTR9-201ENST00000361367 C10orf128Q5T292 105 aa12.05□□□□□ -0.48
CTR9-201ENST00000361367 PXT1Q8NFP0 134 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms